RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 TRIM64BA6NI03 449 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 LACTBL1A8MY62 500 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 TARM1B6A8C7 271 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 SLCO1B7G3V0H7 640 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 MRASO14807 208 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 CLOCKO15516 846 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 SLC35E2BP0CK96 405 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 CCNA2P20248 432 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 OXTRP30559 389 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 IFRD2Q12894 506 aaPredicted RBP10.42□□□□□ -0.74
CLIP4-208ENST00000456385 MAP7D1Q3KQU3 841 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 HSDL1Q3SXM5 330 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 SLC2A7Q6PXP3 512 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 KCNMB4Q86W47 210 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 FAM131BQ86XD5 332 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 ARL10Q8N8L6 244 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 STYXQ8WUJ0 223 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 NGLY1Q96IV0 654 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 NIFKQ9BYG3 293 aaKnown RBP10.42□□□□□ -0.74
CLIP4-208ENST00000456385 TRIM8Q9BZR9 551 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 OSBPL2Q9H1P3 480 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 ARMC1Q9NVT9 282 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 SARDHQ9UL12 918 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 GPC6Q9Y625 555 aaPredicted RBP10.42□□□□□ -0.74
CLIP4-208ENST00000456385 USP3Q9Y6I4 520 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 TRIP11Q15643 1979 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 MGAMO43451 1857 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 TIMM44O43615 452 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 SNAP91O60641 907 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 NFKBIAP25963 317 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 LRPAP1P30533 357 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 SOX11P35716 441 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 HK2P52789 917 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 EFNA5P52803 228 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 TARBP2Q15633 366 aaKnown RBP10.41□□□□□ -0.74
CLIP4-208ENST00000456385 BCL2A1Q16548 175 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 SAMD4BQ5PRF9 694 aaKnown RBP10.41□□□□□ -0.74
CLIP4-208ENST00000456385 ATF7IP2Q5U623 682 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 SNRNP48Q6IEG0 339 aaKnown RBP10.41□□□□□ -0.74
CLIP4-208ENST00000456385 MPZL3Q6UWV2 235 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 CMTR2Q8IYT2 770 aaKnown RBP10.41□□□□□ -0.74
CLIP4-208ENST00000456385 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.41□□□□□ -0.74
CLIP4-208ENST00000456385 SHCBP1Q8NEM2 672 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 BPIFB6Q8NFQ5 453 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 TRUB1Q8WWH5 349 aaKnown RBP10.41□□□□□ -0.74
CLIP4-208ENST00000456385 NXNL1Q96CM4 212 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 HPDLQ96IR7 371 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 MCMBPQ9BTE3 642 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 PRDM12Q9H4Q4 367 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 NANOGQ9H9S0 305 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 PTPRHQ9HD43 1115 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 MRPL40Q9NQ50 206 aaKnown RBP10.41□□□□□ -0.74
CLIP4-208ENST00000456385 RIC8BQ9NVN3 520 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 CROTQ9UKG9 612 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 TCAF1Q9Y4C2 921 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 UBR3Q6ZT12 1888 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 ATP6AP2A0A1C7CYW4 349 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 INO80B-WBP1J3KQ70 363 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 EI24O14681 340 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 UBDO15205 165 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 CLASP2O75122 1294 aaKnown RBP10.41□□□□□ -0.74
CLIP4-208ENST00000456385 ATP6AP2O75787 350 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 NCAM1P13591 858 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 NR4A1P22736 598 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 YWHAQP27348 245 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 IDUAP35475 653 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 SOWAHAQ2M3V2 549 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 TRIM16LQ309B1 348 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 ANO4Q32M45 955 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 INTS11Q5TA45 600 aaKnown RBP10.41□□□□□ -0.74
CLIP4-208ENST00000456385 TMEM214Q6NUQ4 689 aaKnown RBP10.41□□□□□ -0.74
CLIP4-208ENST00000456385 ABRAXAS1Q6UWZ7 409 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 ACOT1Q86TX2 421 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 NT5DC4Q86YG4 428 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 IFNLR1Q8IU57 520 aaPredicted RBP10.41□□□□□ -0.74
CLIP4-208ENST00000456385 SLC41A1Q8IVJ1 513 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 CEP97Q8IW35 865 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 ANKRD52Q8NB46 1076 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 TXNDC5Q8NBS9 432 aaKnown RBP10.41□□□□□ -0.74
CLIP4-208ENST00000456385 RDH11Q8TC12 318 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 LPAR1Q92633 364 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 CASP10Q92851 521 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 ITPKCQ96DU7 683 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 CPB2Q96IY4 423 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 CSF3RQ99062 836 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 UPF3AQ9H1J1 476 aaKnown RBP10.41□□□□□ -0.74
CLIP4-208ENST00000456385 RPF1Q9H9Y2 349 aaKnown RBP10.41□□□□□ -0.74
CLIP4-208ENST00000456385 FBRSL1Q9HCM7 1045 aaKnown RBP10.41□□□□□ -0.74
CLIP4-208ENST00000456385 AGPAT4Q9NRZ5 378 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 CCM2LQ9NUG4 571 aaPredicted RBP10.41□□□□□ -0.74
CLIP4-208ENST00000456385 SLC27A5Q9Y2P5 690 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 ST14Q9Y5Y6 855 aa10.41□□□□□ -0.74
CLIP4-208ENST00000456385 FER1L6Q2WGJ9 1857 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 SYNJ2BP-COX16A0A087WUM0 186 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 DHRS12A0PJE2 317 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 ZNF487B1APH4 448 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 ACOX3O15254 700 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 NRP2O60462 931 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 MAFO75444 373 aaPredicted RBP10.4□□□□□ -0.74
CLIP4-208ENST00000456385 TOMM70O94826 608 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms