RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 G3BP2Q9UN86 482 aaKnown RBP13.8□□□□□ -0.2
CLK3-203ENST00000454830 ACOT9Q9Y305 439 aa13.8□□□□□ -0.2
CLK3-203ENST00000454830 CFAP73A6NFT4 308 aa13.8□□□□□ -0.2
CLK3-203ENST00000454830 WASH4PA8MWX3 477 aa13.8□□□□□ -0.2
CLK3-203ENST00000454830 BNIP3LO60238 219 aa13.8□□□□□ -0.2
CLK3-203ENST00000454830 MPOP05164 745 aa13.8□□□□□ -0.2
CLK3-203ENST00000454830 ESRRAP11474 423 aaPredicted RBP13.8□□□□□ -0.2
CLK3-203ENST00000454830 RASSF2P50749 326 aa13.8□□□□□ -0.2
CLK3-203ENST00000454830 RNF219Q5W0B1 726 aaPredicted RBP13.8□□□□□ -0.2
CLK3-203ENST00000454830 TXNDC8Q6A555 127 aa13.8□□□□□ -0.2
CLK3-203ENST00000454830 TMC7Q7Z402 723 aa13.8□□□□□ -0.2
CLK3-203ENST00000454830 ZC3HC1Q86WB0 502 aaKnown RBP13.8□□□□□ -0.2
CLK3-203ENST00000454830 PARP9Q8IXQ6 854 aa13.8□□□□□ -0.2
CLK3-203ENST00000454830 OXCT2Q9BYC2 517 aaPredicted RBP13.8□□□□□ -0.2
CLK3-203ENST00000454830 WWP1Q9H0M0 922 aa13.8□□□□□ -0.2
CLK3-203ENST00000454830 FIS1Q9Y3D6 152 aa13.8□□□□□ -0.2
CLK3-203ENST00000454830 BACE2Q9Y5Z0 518 aa13.8□□□□□ -0.2
CLK3-203ENST00000454830 TYW5A2RUC4 315 aaKnown RBP13.8□□□□□ -0.2
CLK3-203ENST00000454830 TK2O00142 265 aa13.8□□□□□ -0.2
CLK3-203ENST00000454830 FCHO1O14526 889 aa13.8□□□□□ -0.2
CLK3-203ENST00000454830 BIRC5O15392 142 aa13.8□□□□□ -0.2
CLK3-203ENST00000454830 PROCP04070 461 aa13.8□□□□□ -0.2
CLK3-203ENST00000454830 SERPINE1P05121 402 aa13.8□□□□□ -0.2
CLK3-203ENST00000454830 ENO1P06733 434 aaKnown RBP13.8□□□□□ -0.2
CLK3-203ENST00000454830 HDCP19113 662 aa13.8□□□□□ -0.2
CLK3-203ENST00000454830 MAPKAPK2P49137 400 aa13.8□□□□□ -0.2
CLK3-203ENST00000454830 SNX30Q5VWJ9 437 aa13.8□□□□□ -0.2
CLK3-203ENST00000454830 CLNKQ7Z7G1 428 aa13.8□□□□□ -0.2
CLK3-203ENST00000454830 TOP1MTQ969P6 601 aa13.8□□□□□ -0.2
CLK3-203ENST00000454830 PRR11Q96HE9 360 aaPredicted RBP13.8□□□□□ -0.2
CLK3-203ENST00000454830 PRKD2Q9BZL6 878 aa13.8□□□□□ -0.2
CLK3-203ENST00000454830 C20orf27Q9GZN8 174 aa13.8□□□□□ -0.2
CLK3-203ENST00000454830 VPS45Q9NRW7 570 aa13.8□□□□□ -0.2
CLK3-203ENST00000454830 PLK2Q9NYY3 685 aa13.8□□□□□ -0.2
CLK3-203ENST00000454830 CRYL1Q9Y2S2 319 aa13.8□□□□□ -0.2
CLK3-203ENST00000454830 FRMPD3Q5JV73 1810 aa13.8□□□□□ -0.2
CLK3-203ENST00000454830 AURKAO14965 403 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 STC2O76061 302 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 KRT16P08779 473 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 PMLP29590 882 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 CDK18Q07002 472 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 CBLBQ13191 982 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 CSHL1Q14406 222 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 PCLAFQ15004 111 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 SNCBQ16143 134 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 SIRPB2Q5JXA9 342 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 CNSTQ6PJW8 725 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 ZNF683Q8IZ20 524 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 EXT2Q93063 718 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 NUDCD1Q96RS6 583 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 OMDQ99983 421 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 PNPOQ9NVS9 261 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 KLKB1P03952 638 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 DLDP09622 509 aaKnown RBP13.79□□□□□ -0.2
CLK3-203ENST00000454830 GJA1P17302 382 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 ELF3P78545 371 aaPredicted RBP13.79□□□□□ -0.2
CLK3-203ENST00000454830 KDSRQ06136 332 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 GALNTL6Q49A17 601 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 AFMIDQ63HM1 303 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 KDELC1Q6UW63 502 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 PGBD5Q8N414 524 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 ANKLE1Q8NAG6 615 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 DPF3Q92784 378 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 MKS1Q9NXB0 559 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 VPS28Q9UK41 221 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 TBL1XO60907 577 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 NCF2P19878 526 aaPredicted RBP13.79□□□□□ -0.2
CLK3-203ENST00000454830 ADRA1AP35348 466 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 SGSHP51688 502 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 CCDC153Q494R4 210 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 WBP2Q969T9 261 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 TBATAQ96M53 351 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 TOX2Q96NM4 488 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 FAM167BQ9BTA0 163 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 NMUR2Q9GZQ4 415 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 TMEM51Q9NW97 253 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.79□□□□□ -0.2
CLK3-203ENST00000454830 SEPT3Q9UH03 358 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 TBX21Q9UL17 535 aa13.79□□□□□ -0.2
CLK3-203ENST00000454830 IGLV3-10A0A075B6K4 115 aa13.78□□□□□ -0.2
CLK3-203ENST00000454830 UBA6A0AVT1 1052 aaPredicted RBP13.78□□□□□ -0.2
CLK3-203ENST00000454830 DRGXA6NNA5 263 aa13.78□□□□□ -0.2
CLK3-203ENST00000454830 MUSKO15146 869 aa13.78□□□□□ -0.2
CLK3-203ENST00000454830 PRAMEF11O60813 436 aa13.78□□□□□ -0.2
CLK3-203ENST00000454830 C1RP00736 705 aa13.78□□□□□ -0.2
CLK3-203ENST00000454830 CYP4F8P98187 520 aa13.78□□□□□ -0.2
CLK3-203ENST00000454830 CDH18Q13634 790 aa13.78□□□□□ -0.2
CLK3-203ENST00000454830 E2F5Q15329 346 aa13.78□□□□□ -0.2
CLK3-203ENST00000454830 TSTD2Q5T7W7 516 aa13.78□□□□□ -0.2
CLK3-203ENST00000454830 CES4AQ5XG92 561 aa13.78□□□□□ -0.2
CLK3-203ENST00000454830 SLC39A11Q8N1S5 342 aa13.78□□□□□ -0.2
CLK3-203ENST00000454830 MAB21L3Q8N8X9 362 aa13.78□□□□□ -0.2
CLK3-203ENST00000454830 OR52K2Q8NGK3 314 aa13.78□□□□□ -0.2
CLK3-203ENST00000454830 MICAL1Q8TDZ2 1067 aa13.78□□□□□ -0.2
CLK3-203ENST00000454830 MCUR1Q96AQ8 359 aa13.78□□□□□ -0.2
CLK3-203ENST00000454830 C7orf26Q96N11 449 aa13.78□□□□□ -0.2
CLK3-203ENST00000454830 ACE2Q9BYF1 805 aaPredicted RBP13.78□□□□□ -0.2
CLK3-203ENST00000454830 FNIP2Q9P278 1114 aa13.78□□□□□ -0.2
CLK3-203ENST00000454830 PCDHB12Q9Y5F1 795 aa13.78□□□□□ -0.2
CLK3-203ENST00000454830 ARL5AQ9Y689 179 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms