RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 PLXNA2O75051 1894 aa18.34■□□□□ 0.53
SQSTM1-204ENST00000453046 MIF4GDA9UHW6 222 aaKnown RBP18.33■□□□□ 0.52
SQSTM1-204ENST00000453046 C10orf142B7Z368 130 aa18.33■□□□□ 0.52
SQSTM1-204ENST00000453046 TLR4O00206 839 aa18.33■□□□□ 0.52
SQSTM1-204ENST00000453046 TNFSF14O43557 240 aa18.33■□□□□ 0.52
SQSTM1-204ENST00000453046 MAGEC1O60732 1142 aa18.33■□□□□ 0.52
SQSTM1-204ENST00000453046 ITGAVP06756 1048 aa18.33■□□□□ 0.52
SQSTM1-204ENST00000453046 ATXN1LP0C7T5 689 aaKnown RBP18.33■□□□□ 0.52
SQSTM1-204ENST00000453046 DESP17661 470 aa18.33■□□□□ 0.52
SQSTM1-204ENST00000453046 GPD1P21695 349 aa18.33■□□□□ 0.52
SQSTM1-204ENST00000453046 RFC1P35251 1148 aaPredicted RBP18.33■□□□□ 0.52
SQSTM1-204ENST00000453046 ARRB1P49407 418 aaPredicted RBP18.33■□□□□ 0.52
SQSTM1-204ENST00000453046 ARSIQ5FYB1 569 aa18.33■□□□□ 0.52
SQSTM1-204ENST00000453046 MEI1Q5TIA1 1274 aa18.33■□□□□ 0.52
SQSTM1-204ENST00000453046 PAPD7Q5XG87 772 aaKnown RBP18.33■□□□□ 0.52
SQSTM1-204ENST00000453046 DPY19L3Q6ZPD9 716 aa18.33■□□□□ 0.52
SQSTM1-204ENST00000453046 CHST14Q8NCH0 376 aa18.33■□□□□ 0.52
SQSTM1-204ENST00000453046 TBC1D31Q96DN5 1066 aa18.33■□□□□ 0.52
SQSTM1-204ENST00000453046 BTBD6Q96KE9 485 aa18.33■□□□□ 0.52
SQSTM1-204ENST00000453046 CEP44Q9C0F1 390 aa18.33■□□□□ 0.52
SQSTM1-204ENST00000453046 OSBPL2Q9H1P3 480 aa18.33■□□□□ 0.52
SQSTM1-204ENST00000453046 GOLPH3Q9H4A6 298 aa18.33■□□□□ 0.52
SQSTM1-204ENST00000453046 ZNF212Q9UDV6 495 aa18.33■□□□□ 0.52
SQSTM1-204ENST00000453046 TMEM131Q92545 1883 aa18.33■□□□□ 0.52
SQSTM1-204ENST00000453046 ASPMQ8IZT6 3477 aa18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 FAM221BA6H8Z2 402 aa18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 TMEM110-MUSTN1A8MSY1 372 aa18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 YKT6O15498 198 aa18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 SPOPO43791 374 aa18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 RNGTTO60942 597 aaKnown RBP18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 LEFTY1O75610 366 aa18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 ATP1A1P05023 1023 aaKnown RBP18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 RHOQP17081 205 aa18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 PSMA2P25787 234 aa18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 MAPKAPK2P49137 400 aa18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 SERPINH1P50454 418 aaKnown RBP18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 ZNF143P52747 638 aaPredicted RBP18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 HDAC4P56524 1084 aa18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 NXPH1P58417 271 aa18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 NRG1Q02297 640 aaPredicted RBP18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 ACAP1Q15027 740 aa18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 CCDC157Q569K6 752 aa18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 ARTNQ5T4W7 220 aa18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 PIP5KL1Q5T9C9 394 aa18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 SCYL2Q6P3W7 929 aa18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 GATAD2AQ86YP4 633 aa18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 OXR1Q8N573 874 aa18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 PCDH20Q8N6Y1 951 aaKnown RBP18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 MFSD2AQ8NA29 543 aa18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 ZCCHC14Q8WYQ9 949 aaKnown RBP18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 CENPIQ92674 756 aaPredicted RBP18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 ARRDC3Q96B67 414 aa18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 TLR10Q9BXR5 811 aa18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 RETREG1Q9H6L5 497 aa18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 FTSJ1Q9UET6 329 aa18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 HPCAL4Q9UM19 191 aa18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 HYOU1Q9Y4L1 999 aa18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 ALG6Q9Y672 507 aa18.32■□□□□ 0.52
SQSTM1-204ENST00000453046 AKAP13Q12802 2813 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 IGF2RP11717 2491 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 FAM72CH0Y354 149 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 PRAMEF26H0Y7S4 382 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 ENC1O14682 589 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 ZMPSTE24O75844 475 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 LRIG2O94898 1065 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 PCDH8O95206 1070 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 TCP1P17987 556 aaKnown RBP18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 COMTP21964 271 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 ACVRL1P37023 503 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 TAS2R38P59533 333 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 ARF5P84085 180 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 OGDHQ02218 1023 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 TUBB2AQ13885 445 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 RPS6KA1Q15418 735 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 CARD16Q5EG05 197 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 FAM72AQ5TYM5 149 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 MANEALQ5VSG8 457 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 FAM72DQ6L9T8 149 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 NEK5Q6P3R8 708 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 ERN2Q76MJ5 926 aaKnown RBP18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 IQCHQ86VS3 1027 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 FAM72BQ86X60 149 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 ZNF354CQ86Y25 554 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 CCDC185Q8N715 623 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 KLK6Q92876 244 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 HES6Q96HZ4 224 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 NCAPGQ9BPX3 1015 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 HEPHQ9BQS7 1158 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 CNPY3Q9BT09 278 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 TUBB2BQ9BVA1 445 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 NDFIP2Q9NV92 336 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 TMEM248Q9NWD8 314 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 SNX12Q9UMY4 172 aa18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 FCF1Q9Y324 198 aaKnown RBP18.31■□□□□ 0.52
SQSTM1-204ENST00000453046 A0A1W2PQU0 124 aa18.3■□□□□ 0.52
SQSTM1-204ENST00000453046 SLC31A1O15431 190 aa18.3■□□□□ 0.52
SQSTM1-204ENST00000453046 PSTPIP1O43586 416 aa18.3■□□□□ 0.52
SQSTM1-204ENST00000453046 RAMP2O60895 175 aa18.3■□□□□ 0.52
SQSTM1-204ENST00000453046 PRLRP16471 622 aa18.3■□□□□ 0.52
SQSTM1-204ENST00000453046 CTNNA2P26232 953 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms