RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 SPASTQ9UBP0 616 aa11.87□□□□□ -0.51
HERC3-207ENST00000452979 C16orf96A6NNT2 1141 aa11.86□□□□□ -0.51
HERC3-207ENST00000452979 LMO7DNF2Z398 122 aa11.86□□□□□ -0.51
HERC3-207ENST00000452979 FOXN3O00409 490 aaPredicted RBP11.86□□□□□ -0.51
HERC3-207ENST00000452979 SRGAP2O75044 1071 aa11.86□□□□□ -0.51
HERC3-207ENST00000452979 RPIAP49247 311 aa11.86□□□□□ -0.51
HERC3-207ENST00000452979 SULT1E1P49888 294 aa11.86□□□□□ -0.51
HERC3-207ENST00000452979 RNASE9P60153 205 aaKnown RBP11.86□□□□□ -0.51
HERC3-207ENST00000452979 YPEL5P62699 121 aa11.86□□□□□ -0.51
HERC3-207ENST00000452979 GNA12Q03113 381 aa11.86□□□□□ -0.51
HERC3-207ENST00000452979 DEUP1Q05D60 604 aa11.86□□□□□ -0.51
HERC3-207ENST00000452979 CLN3Q13286 438 aa11.86□□□□□ -0.51
HERC3-207ENST00000452979 EXOC3L4Q17RC7 722 aa11.86□□□□□ -0.51
HERC3-207ENST00000452979 DEFB133Q30KQ1 61 aa11.86□□□□□ -0.51
HERC3-207ENST00000452979 ARL13BQ3SXY8 428 aa11.86□□□□□ -0.51
HERC3-207ENST00000452979 PERM1Q5SV97 790 aa11.86□□□□□ -0.51
HERC3-207ENST00000452979 LUZP1Q86V48 1076 aa11.86□□□□□ -0.51
HERC3-207ENST00000452979 IRF2BP1Q8IU81 584 aa11.86□□□□□ -0.51
HERC3-207ENST00000452979 ARL14Q8N4G2 192 aa11.86□□□□□ -0.51
HERC3-207ENST00000452979 GLMNQ92990 594 aa11.86□□□□□ -0.51
HERC3-207ENST00000452979 TBCBQ99426 244 aa11.86□□□□□ -0.51
HERC3-207ENST00000452979 NAT10Q9H0A0 1025 aaKnown RBP11.86□□□□□ -0.51
HERC3-207ENST00000452979 RETREG1Q9H6L5 497 aa11.86□□□□□ -0.51
HERC3-207ENST00000452979 ATP13A1Q9HD20 1204 aa11.86□□□□□ -0.51
HERC3-207ENST00000452979 SIX2Q9NPC8 291 aa11.86□□□□□ -0.51
HERC3-207ENST00000452979 SAMSN1Q9NSI8 373 aaKnown RBP11.86□□□□□ -0.51
HERC3-207ENST00000452979 HECAQ9UBI9 543 aaPredicted RBP11.86□□□□□ -0.51
HERC3-207ENST00000452979 KIF26BQ2KJY2 2108 aa11.86□□□□□ -0.51
HERC3-207ENST00000452979 MYO18BQ8IUG5 2567 aa11.85□□□□□ -0.51
HERC3-207ENST00000452979 RP1P56715 2156 aa11.85□□□□□ -0.51
HERC3-207ENST00000452979 TOR1BO14657 336 aa11.85□□□□□ -0.51
HERC3-207ENST00000452979 YY2O15391 372 aa11.85□□□□□ -0.51
HERC3-207ENST00000452979 GCATO75600 419 aa11.85□□□□□ -0.51
HERC3-207ENST00000452979 TNFSF15O95150 251 aa11.85□□□□□ -0.51
HERC3-207ENST00000452979 ABL2P42684 1182 aa11.85□□□□□ -0.51
HERC3-207ENST00000452979 DNA2P51530 1060 aa11.85□□□□□ -0.51
HERC3-207ENST00000452979 PDX1P52945 283 aa11.85□□□□□ -0.51
HERC3-207ENST00000452979 ADKP55263 362 aaKnown RBP11.85□□□□□ -0.51
HERC3-207ENST00000452979 KCNC4Q03721 635 aa11.85□□□□□ -0.51
HERC3-207ENST00000452979 C1QBPQ07021 282 aaKnown RBP11.85□□□□□ -0.51
HERC3-207ENST00000452979 PTK2BQ14289 1009 aa11.85□□□□□ -0.51
HERC3-207ENST00000452979 HSP90AA4PQ58FG1 418 aa11.85□□□□□ -0.51
HERC3-207ENST00000452979 ZNF805Q5CZA5 627 aa11.85□□□□□ -0.51
HERC3-207ENST00000452979 C6orf132Q5T0Z8 1188 aa11.85□□□□□ -0.51
HERC3-207ENST00000452979 CDKAL1Q5VV42 579 aa11.85□□□□□ -0.51
HERC3-207ENST00000452979 CCDC81Q6ZN84 652 aa11.85□□□□□ -0.51
HERC3-207ENST00000452979 ARCQ7LC44 396 aa11.85□□□□□ -0.51
HERC3-207ENST00000452979 SLC35F3Q8IY50 421 aa11.85□□□□□ -0.51
HERC3-207ENST00000452979 FAM71AQ8IYT1 594 aa11.85□□□□□ -0.51
HERC3-207ENST00000452979 TMEM35BQ8NCS4 154 aa11.85□□□□□ -0.51
HERC3-207ENST00000452979 RNF214Q8ND24 703 aa11.85□□□□□ -0.51
HERC3-207ENST00000452979 NAT6Q93015 286 aa11.85□□□□□ -0.51
HERC3-207ENST00000452979 C18orf8Q96DM3 657 aa11.85□□□□□ -0.51
HERC3-207ENST00000452979 TCEAL2Q9H3H9 227 aaPredicted RBP11.85□□□□□ -0.51
HERC3-207ENST00000452979 CLMPQ9H6B4 373 aa11.85□□□□□ -0.51
HERC3-207ENST00000452979 PLCB1Q9NQ66 1216 aa11.85□□□□□ -0.51
HERC3-207ENST00000452979 DNAJC12Q9UKB3 198 aa11.85□□□□□ -0.51
HERC3-207ENST00000452979 AJAP1Q9UKB5 411 aaPredicted RBP11.85□□□□□ -0.51
HERC3-207ENST00000452979 PNMA8BQ9ULN7 279 aaPredicted RBP11.85□□□□□ -0.51
HERC3-207ENST00000452979 FCF1Q9Y324 198 aaKnown RBP11.85□□□□□ -0.51
HERC3-207ENST00000452979 CCDC187A0A096LP49 1063 aa11.84□□□□□ -0.51
HERC3-207ENST00000452979 PMS2P1A4D2B8 440 aa11.84□□□□□ -0.51
HERC3-207ENST00000452979 NTN3O00634 580 aaPredicted RBP11.84□□□□□ -0.51
HERC3-207ENST00000452979 AREL1O15033 823 aa11.84□□□□□ -0.51
HERC3-207ENST00000452979 MUSKO15146 869 aa11.84□□□□□ -0.51
HERC3-207ENST00000452979 CASC3O15234 703 aaKnown RBP11.84□□□□□ -0.51
HERC3-207ENST00000452979 EFSO43281 561 aa11.84□□□□□ -0.51
HERC3-207ENST00000452979 ITGA2BP08514 1039 aa11.84□□□□□ -0.51
HERC3-207ENST00000452979 THOP1P52888 689 aa11.84□□□□□ -0.51
HERC3-207ENST00000452979 BPIFB4P59827 614 aa11.84□□□□□ -0.51
HERC3-207ENST00000452979 NRG1Q02297 640 aaPredicted RBP11.84□□□□□ -0.51
HERC3-207ENST00000452979 DRAP1Q14919 205 aaPredicted RBP11.84□□□□□ -0.51
HERC3-207ENST00000452979 PRRT3Q5FWE3 981 aa11.84□□□□□ -0.51
HERC3-207ENST00000452979 KIAA1614Q5VZ46 1190 aa11.84□□□□□ -0.51
HERC3-207ENST00000452979 DPY19L2P1Q6NXN4 242 aa11.84□□□□□ -0.51
HERC3-207ENST00000452979 CRTC1Q6UUV9 634 aa11.84□□□□□ -0.51
HERC3-207ENST00000452979 XKR5Q6UX68 686 aa11.84□□□□□ -0.51
HERC3-207ENST00000452979 XYLT1Q86Y38 959 aa11.84□□□□□ -0.51
HERC3-207ENST00000452979 PHACTR4Q8IZ21 702 aa11.84□□□□□ -0.51
HERC3-207ENST00000452979 RBFAQ8N0V3 343 aa11.84□□□□□ -0.51
HERC3-207ENST00000452979 ARHGEF26Q96DR7 871 aa11.84□□□□□ -0.51
HERC3-207ENST00000452979 LIN37Q96GY3 246 aaPredicted RBP11.84□□□□□ -0.51
HERC3-207ENST00000452979 CCDC3Q9BQI4 270 aa11.84□□□□□ -0.51
HERC3-207ENST00000452979 LRRC61Q9BV99 259 aa11.84□□□□□ -0.51
HERC3-207ENST00000452979 OSBPL1AQ9BXW6 950 aa11.84□□□□□ -0.51
HERC3-207ENST00000452979 CLPBQ9H078 707 aa11.84□□□□□ -0.51
HERC3-207ENST00000452979 RBSNQ9H1K0 784 aa11.84□□□□□ -0.51
HERC3-207ENST00000452979 ZDHHC6Q9H6R6 413 aa11.84□□□□□ -0.51
HERC3-207ENST00000452979 FANCLQ9NW38 375 aa11.84□□□□□ -0.51
HERC3-207ENST00000452979 APOBEC3BQ9UH17 382 aaKnown RBP11.84□□□□□ -0.51
HERC3-207ENST00000452979 GGT7Q9UJ14 662 aa11.84□□□□□ -0.51
HERC3-207ENST00000452979 TMEM59LQ9UK28 342 aa11.84□□□□□ -0.51
HERC3-207ENST00000452979 PADI4Q9UM07 663 aa11.84□□□□□ -0.51
HERC3-207ENST00000452979 PCDHGA7Q9Y5G6 932 aa11.84□□□□□ -0.51
HERC3-207ENST00000452979 ACTL7AQ9Y615 435 aa11.84□□□□□ -0.51
HERC3-207ENST00000452979 SCN8AQ9UQD0 1980 aa11.83□□□□□ -0.52
HERC3-207ENST00000452979 CYSRT1A8MQ03 144 aa11.83□□□□□ -0.52
HERC3-207ENST00000452979 TMX2-CTNND1H3BSU7 103 aa11.83□□□□□ -0.52
HERC3-207ENST00000452979 NEMP1O14524 444 aa11.83□□□□□ -0.52
HERC3-207ENST00000452979 WISP1O95388 367 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms