RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 NUBP1P53384 320 aa24.35■■□□□ 1.49
CPSF4-207ENST00000451876 NIPAL4Q0D2K0 466 aa24.35■■□□□ 1.49
CPSF4-207ENST00000451876 NCEH1Q6PIU2 408 aa24.35■■□□□ 1.49
CPSF4-207ENST00000451876 FAM71DQ8N9W8 422 aa24.35■■□□□ 1.49
CPSF4-207ENST00000451876 RLN3Q8WXF3 142 aa24.35■■□□□ 1.49
CPSF4-207ENST00000451876 NAP1L3Q99457 506 aaPredicted RBP24.35■■□□□ 1.49
CPSF4-207ENST00000451876 CPEB1Q9BZB8 566 aaKnown RBP24.35■■□□□ 1.49
CPSF4-207ENST00000451876 SCUBE2Q9NQ36 999 aa24.35■■□□□ 1.49
CPSF4-207ENST00000451876 KLHL8Q9P2G9 620 aaPredicted RBP24.35■■□□□ 1.49
CPSF4-207ENST00000451876 FANCMQ8IYD8 2048 aa24.35■■□□□ 1.49
CPSF4-207ENST00000451876 C1QTNF3-AMACRE9PGA6 284 aa24.34■■□□□ 1.49
CPSF4-207ENST00000451876 ADH1BP00325 375 aa24.34■■□□□ 1.49
CPSF4-207ENST00000451876 SP9P0CG40 484 aa24.34■■□□□ 1.49
CPSF4-207ENST00000451876 DRD3P35462 400 aa24.34■■□□□ 1.49
CPSF4-207ENST00000451876 AP1S1P61966 158 aa24.34■■□□□ 1.49
CPSF4-207ENST00000451876 CAMK1DQ8IU85 385 aa24.34■■□□□ 1.49
CPSF4-207ENST00000451876 FRMD1Q8N878 549 aa24.34■■□□□ 1.49
CPSF4-207ENST00000451876 ZNF592Q92610 1267 aa24.34■■□□□ 1.49
CPSF4-207ENST00000451876 ARRDC3Q96B67 414 aa24.34■■□□□ 1.49
CPSF4-207ENST00000451876 VAT1Q99536 393 aa24.34■■□□□ 1.49
CPSF4-207ENST00000451876 PABPC3Q9H361 631 aaKnown RBP24.34■■□□□ 1.49
CPSF4-207ENST00000451876 USP36Q9P275 1121 aaKnown RBP24.34■■□□□ 1.49
CPSF4-207ENST00000451876 MYO15AQ9UKN7 3530 aa24.34■■□□□ 1.49
CPSF4-207ENST00000451876 PDE2AO00408 941 aaPredicted RBP24.33■■□□□ 1.49
CPSF4-207ENST00000451876 C5AR1P21730 350 aa24.33■■□□□ 1.49
CPSF4-207ENST00000451876 KCNJ1P48048 391 aa24.33■■□□□ 1.49
CPSF4-207ENST00000451876 TPMTP51580 245 aa24.33■■□□□ 1.49
CPSF4-207ENST00000451876 ZBTB16Q05516 673 aa24.33■■□□□ 1.49
CPSF4-207ENST00000451876 RAD51Q06609 339 aa24.33■■□□□ 1.49
CPSF4-207ENST00000451876 KCTD19Q17RG1 926 aaPredicted RBP24.33■■□□□ 1.49
CPSF4-207ENST00000451876 DRICH1Q6PGQ1 229 aaPredicted RBP24.33■■□□□ 1.49
CPSF4-207ENST00000451876 NELL1Q92832 810 aa24.33■■□□□ 1.49
CPSF4-207ENST00000451876 LRIG1Q96JA1 1093 aa24.33■■□□□ 1.49
CPSF4-207ENST00000451876 KLHL32Q96NJ5 620 aa24.33■■□□□ 1.49
CPSF4-207ENST00000451876 ZNF148Q9UQR1 794 aa24.33■■□□□ 1.49
CPSF4-207ENST00000451876 CCDC163A0A0D9SF12 145 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 A0A1W2PP55 124 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 MMP2P08253 660 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 ACADMP11310 421 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 NFKB1P19838 968 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 ANKRD20A2Q5SQ80 823 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 ANKRD20A1Q5TYW2 823 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 ANKRD20A3Q5VUR7 823 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 TTC27Q6P3X3 843 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 GDPD4Q6W3E5 623 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 PID1Q7Z2X4 250 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 FAM160A2Q8N612 972 aaPredicted RBP24.32■■□□□ 1.48
CPSF4-207ENST00000451876 CCDC110Q8TBZ0 833 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 TUBGCP5Q96RT8 1024 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 OSBPL1AQ9BXW6 950 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 ITM2CQ9NQX7 267 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 PCDHGC4Q9Y5F7 938 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 F5H423 210 aaPredicted RBP24.32■■□□□ 1.48
CPSF4-207ENST00000451876 ITGAVP06756 1048 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 MAPK8P45983 427 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 CYP1B1Q16678 543 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 ZNF528Q3MIS6 628 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 TTC31Q49AM3 519 aaPredicted RBP24.32■■□□□ 1.48
CPSF4-207ENST00000451876 FAM46CQ5VWP2 391 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 WDR5BQ86VZ2 330 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 LONP2Q86WA8 852 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 PRSS33Q8NF86 280 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 SPATA13Q96N96 652 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 FERMT1Q9BQL6 677 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 ATP13A3Q9H7F0 1226 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 GLOD4Q9HC38 313 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 HAUS2Q9NVX0 235 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 FBXL12Q9NXK8 326 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 SCML1Q9UN30 329 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 CYP8B1Q9UNU6 501 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 INVSQ9Y283 1065 aa24.32■■□□□ 1.48
CPSF4-207ENST00000451876 DMDP11532 3685 aa24.31■■□□□ 1.48
CPSF4-207ENST00000451876 CFAP69A5D8W1 941 aa24.31■■□□□ 1.48
CPSF4-207ENST00000451876 KIF2AO00139 706 aaPredicted RBP24.31■■□□□ 1.48
CPSF4-207ENST00000451876 CD86P42081 329 aa24.31■■□□□ 1.48
CPSF4-207ENST00000451876 CNTN1Q12860 1018 aa24.31■■□□□ 1.48
CPSF4-207ENST00000451876 TRAF2Q12933 501 aa24.31■■□□□ 1.48
CPSF4-207ENST00000451876 GRM3Q14832 879 aa24.31■■□□□ 1.48
CPSF4-207ENST00000451876 MAP7D1Q3KQU3 841 aa24.31■■□□□ 1.48
CPSF4-207ENST00000451876 ZNF805Q5CZA5 627 aa24.31■■□□□ 1.48
CPSF4-207ENST00000451876 RALGPS1Q5JS13 557 aa24.31■■□□□ 1.48
CPSF4-207ENST00000451876 PARS2Q7L3T8 475 aaKnown RBP24.31■■□□□ 1.48
CPSF4-207ENST00000451876 PRUNE1Q86TP1 453 aa24.31■■□□□ 1.48
CPSF4-207ENST00000451876 PRPF39Q86UA1 669 aaKnown RBP24.31■■□□□ 1.48
CPSF4-207ENST00000451876 FAM124AQ86V42 546 aa24.31■■□□□ 1.48
CPSF4-207ENST00000451876 ZSWIM9Q86XI8 627 aa24.31■■□□□ 1.48
CPSF4-207ENST00000451876 HDDC3Q8N4P3 179 aa24.31■■□□□ 1.48
CPSF4-207ENST00000451876 C12orf50Q8NA57 414 aaPredicted RBP24.31■■□□□ 1.48
CPSF4-207ENST00000451876 GLIS1Q8NBF1 620 aa24.31■■□□□ 1.48
CPSF4-207ENST00000451876 SPATA22Q8NHS9 363 aa24.31■■□□□ 1.48
CPSF4-207ENST00000451876 RTP4Q96DX8 246 aa24.31■■□□□ 1.48
CPSF4-207ENST00000451876 IMP4Q96G21 291 aaKnown RBP24.31■■□□□ 1.48
CPSF4-207ENST00000451876 RBM15Q96T37 977 aaKnown RBP eCLIP24.31■■□□□ 1.48
CPSF4-207ENST00000451876 SLC25A51Q9H1U9 297 aa24.31■■□□□ 1.48
CPSF4-207ENST00000451876 SUV39H2Q9H5I1 410 aa24.31■■□□□ 1.48
CPSF4-207ENST00000451876 HOMER3Q9NSC5 361 aa24.31■■□□□ 1.48
CPSF4-207ENST00000451876 TRHDEQ9UKU6 1024 aa24.31■■□□□ 1.48
CPSF4-207ENST00000451876 CEP192Q8TEP8 1941 aa24.31■■□□□ 1.48
CPSF4-207ENST00000451876 C5orf60A6NFR6 353 aa24.3■■□□□ 1.48
CPSF4-207ENST00000451876 H0Y858 1186 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms