RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 CST6Q15828 149 aa13.2□□□□□ -0.3
VPS33A-202ENST00000451053 C8orf74Q6P047 294 aa13.2□□□□□ -0.3
VPS33A-202ENST00000451053 CCDC137Q6PK04 289 aaKnown RBP13.2□□□□□ -0.3
VPS33A-202ENST00000451053 DSG4Q86SJ6 1040 aa13.2□□□□□ -0.3
VPS33A-202ENST00000451053 SRLQ86TD4 932 aa13.2□□□□□ -0.3
VPS33A-202ENST00000451053 KLHL7Q8IXQ5 586 aa13.2□□□□□ -0.3
VPS33A-202ENST00000451053 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.2□□□□□ -0.3
VPS33A-202ENST00000451053 PIP4K2CQ8TBX8 421 aa13.2□□□□□ -0.3
VPS33A-202ENST00000451053 UBXN4Q92575 508 aa13.2□□□□□ -0.3
VPS33A-202ENST00000451053 PRCCQ92733 491 aaPredicted RBP13.2□□□□□ -0.3
VPS33A-202ENST00000451053 NKD2Q969F2 451 aaPredicted RBP13.2□□□□□ -0.3
VPS33A-202ENST00000451053 AGAP3Q96P47 875 aa13.2□□□□□ -0.3
VPS33A-202ENST00000451053 KRT12Q99456 494 aa13.2□□□□□ -0.3
VPS33A-202ENST00000451053 FERMT1Q9BQL6 677 aa13.2□□□□□ -0.3
VPS33A-202ENST00000451053 DDX47Q9H0S4 455 aaKnown RBP13.2□□□□□ -0.3
VPS33A-202ENST00000451053 CD93Q9NPY3 652 aa13.2□□□□□ -0.3
VPS33A-202ENST00000451053 IL36AQ9UHA7 158 aa13.2□□□□□ -0.3
VPS33A-202ENST00000451053 PCYOX1Q9UHG3 505 aa13.2□□□□□ -0.3
VPS33A-202ENST00000451053 ATP8A1Q9Y2Q0 1164 aa13.2□□□□□ -0.3
VPS33A-202ENST00000451053 TTLL3Q9Y4R7 772 aa13.2□□□□□ -0.3
VPS33A-202ENST00000451053 CACNA1IQ9P0X4 2223 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 CFAP69A5D8W1 941 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 PLK4O00444 970 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 AXIN1O15169 862 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 KCNN4O15554 427 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 MTSS1O43312 755 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 PIGNO95427 931 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 GAS8O95995 478 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 PRNPP04156 253 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 ITGAVP06756 1048 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 SP9P0CG40 484 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 C7P10643 843 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 SLC8A1P32418 973 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 ITKQ08881 620 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 NSUN2Q08J23 767 aaKnown RBP eCLIP13.19□□□□□ -0.3
VPS33A-202ENST00000451053 NIPAL4Q0D2K0 466 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 BYSLQ13895 437 aaKnown RBP13.19□□□□□ -0.3
VPS33A-202ENST00000451053 OASLQ15646 514 aaKnown RBP13.19□□□□□ -0.3
VPS33A-202ENST00000451053 TEX44Q53QW1 395 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 ARSIQ5FYB1 569 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 TEX35Q5T0J7 233 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 ALG1LQ6GMV1 187 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 SYDE1Q6ZW31 735 aaPredicted RBP13.19□□□□□ -0.3
VPS33A-202ENST00000451053 ZNF567Q8N184 647 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 AADATQ8N5Z0 425 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 TMIEQ8NEW7 156 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 MYRIPQ8NFW9 859 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 ATL2Q8NHH9 583 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 ARRDC2Q8TBH0 407 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 ARRDC3Q96B67 414 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 NUDCD1Q96RS6 583 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 SEMA3CQ99985 751 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 TMEM121Q9BTD3 319 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 POLR1EQ9GZS1 481 aaKnown RBP13.19□□□□□ -0.3
VPS33A-202ENST00000451053 PABPC3Q9H361 631 aaKnown RBP13.19□□□□□ -0.3
VPS33A-202ENST00000451053 USP29Q9HBJ7 922 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 NOD2Q9HC29 1040 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 SCUBE2Q9NQ36 999 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 AMACRQ9UHK6 382 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 ZNF148Q9UQR1 794 aa13.19□□□□□ -0.3
VPS33A-202ENST00000451053 DRG1Q9Y295 367 aaKnown RBP13.19□□□□□ -0.3
VPS33A-202ENST00000451053 ZNF318Q5VUA4 2279 aa13.18□□□□□ -0.3
VPS33A-202ENST00000451053 FAM187AA6NFU0 413 aa13.18□□□□□ -0.3
VPS33A-202ENST00000451053 C1QTNF3-AMACRE9PGA6 284 aa13.18□□□□□ -0.3
VPS33A-202ENST00000451053 KPNA3O00505 521 aaPredicted RBP13.18□□□□□ -0.3
VPS33A-202ENST00000451053 ECEL1O95672 775 aa13.18□□□□□ -0.3
VPS33A-202ENST00000451053 ADH1BP00325 375 aa13.18□□□□□ -0.3
VPS33A-202ENST00000451053 DNTTP04053 509 aa13.18□□□□□ -0.3
VPS33A-202ENST00000451053 UGT2B4P06133 528 aa13.18□□□□□ -0.3
VPS33A-202ENST00000451053 CD68P34810 354 aaPredicted RBP13.18□□□□□ -0.3
VPS33A-202ENST00000451053 GDF10P55107 478 aa13.18□□□□□ -0.3
VPS33A-202ENST00000451053 AP1S1P61966 158 aa13.18□□□□□ -0.3
VPS33A-202ENST00000451053 DR1Q01658 176 aa13.18□□□□□ -0.3
VPS33A-202ENST00000451053 ZBTB16Q05516 673 aa13.18□□□□□ -0.3
VPS33A-202ENST00000451053 RAD51Q06609 339 aa13.18□□□□□ -0.3
VPS33A-202ENST00000451053 IHHQ14623 411 aa13.18□□□□□ -0.3
VPS33A-202ENST00000451053 NCEH1Q6PIU2 408 aa13.18□□□□□ -0.3
VPS33A-202ENST00000451053 WDR5BQ86VZ2 330 aa13.18□□□□□ -0.3
VPS33A-202ENST00000451053 CAMK1DQ8IU85 385 aa13.18□□□□□ -0.3
VPS33A-202ENST00000451053 FRMD1Q8N878 549 aa13.18□□□□□ -0.3
VPS33A-202ENST00000451053 FAM71DQ8N9W8 422 aa13.18□□□□□ -0.3
VPS33A-202ENST00000451053 NOA1Q8NC60 698 aaKnown RBP13.18□□□□□ -0.3
VPS33A-202ENST00000451053 PRSS33Q8NF86 280 aa13.18□□□□□ -0.3
VPS33A-202ENST00000451053 RLN3Q8WXF3 142 aa13.18□□□□□ -0.3
VPS33A-202ENST00000451053 NELL1Q92832 810 aa13.18□□□□□ -0.3
VPS33A-202ENST00000451053 SLCO2A1Q92959 643 aa13.18□□□□□ -0.3
VPS33A-202ENST00000451053 TEKT5Q96M29 485 aa13.18□□□□□ -0.3
VPS33A-202ENST00000451053 TUBGCP5Q96RT8 1024 aa13.18□□□□□ -0.3
VPS33A-202ENST00000451053 CPEB1Q9BZB8 566 aaKnown RBP13.18□□□□□ -0.3
VPS33A-202ENST00000451053 USP36Q9P275 1121 aaKnown RBP13.18□□□□□ -0.3
VPS33A-202ENST00000451053 KLHL8Q9P2G9 620 aaPredicted RBP13.18□□□□□ -0.3
VPS33A-202ENST00000451053 SERGEFQ9UGK8 458 aa13.18□□□□□ -0.3
VPS33A-202ENST00000451053 CYP8B1Q9UNU6 501 aa13.18□□□□□ -0.3
VPS33A-202ENST00000451053 INVSQ9Y283 1065 aa13.18□□□□□ -0.3
VPS33A-202ENST00000451053 CCDC163A0A0D9SF12 145 aa13.17□□□□□ -0.3
VPS33A-202ENST00000451053 A0A1W2PP55 124 aa13.17□□□□□ -0.3
VPS33A-202ENST00000451053 F5H423 210 aaPredicted RBP13.17□□□□□ -0.3
VPS33A-202ENST00000451053 MMP2P08253 660 aa13.17□□□□□ -0.3
VPS33A-202ENST00000451053 ACADMP11310 421 aa13.17□□□□□ -0.3
VPS33A-202ENST00000451053 NFKB1P19838 968 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms