RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 NGLY1Q96IV0 654 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 C9orf16Q9BUW7 83 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 FUNDC2Q9BWH2 189 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 SEZ6LQ9BYH1 1024 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 UNC93B1Q9H1C4 597 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 UPF3AQ9H1J1 476 aaKnown RBP8.71□□□□□ -1.01
LSM5-208ENST00000450169 FBXO8Q9NRD0 319 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.71□□□□□ -1.01
LSM5-208ENST00000450169 GIMAP4Q9NUV9 329 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 TMEM216Q9P0N5 145 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 KCNN3Q9UGI6 736 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 MINPP1Q9UNW1 487 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 UGT2A1Q9Y4X1 527 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 PCDHA1Q9Y5I3 950 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 FER1L6Q2WGJ9 1857 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 TNRC6CQ9HCJ0 1690 aaKnown RBP8.71□□□□□ -1.01
LSM5-208ENST00000450169 PRORSD1PA6NEY8 169 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 TRIM24O15164 1050 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 HDAC3O15379 428 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 UGT2B11O75310 529 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 TSPAN9O75954 239 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 KCNK2O95069 426 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 MFN2O95140 757 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 DLGAP3O95886 979 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 VAMP1P23763 118 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 EPHX2P34913 555 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 RACK1P63244 317 aaKnown RBP8.71□□□□□ -1.02
LSM5-208ENST00000450169 MRPS15P82914 257 aaKnown RBP8.71□□□□□ -1.02
LSM5-208ENST00000450169 ROR1Q01973 937 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 BST2Q10589 180 aaKnown RBP8.71□□□□□ -1.02
LSM5-208ENST00000450169 SLC12A1Q13621 1099 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 PIGHQ14442 188 aaPredicted RBP8.71□□□□□ -1.02
LSM5-208ENST00000450169 PLCL1Q15111 1095 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 PTPRNQ16849 979 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 PAGE2BQ5JRK9 111 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 CYP4A22Q5TCH4 519 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 SEL1L3Q68CR1 1132 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 DARS2Q6PI48 645 aaKnown RBP8.71□□□□□ -1.02
LSM5-208ENST00000450169 NAPRTQ6XQN6 538 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 CAND1Q86VP6 1230 aaKnown RBP8.71□□□□□ -1.02
LSM5-208ENST00000450169 OSTM1Q86WC4 334 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 LACC1Q8IV20 430 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 SCUBE3Q8IX30 993 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 BEND7Q8N7W2 519 aaPredicted RBP8.71□□□□□ -1.02
LSM5-208ENST00000450169 TOR1AIP2Q8NFQ8 470 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 CYP2W1Q8TAV3 490 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 SPATA18Q8TC71 538 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 FAM110BQ8TC76 370 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 SLC7A3Q8WY07 619 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 FKBP10Q96AY3 582 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 LRRC39Q96DD0 335 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 P2RX7Q99572 595 aaKnown RBP8.71□□□□□ -1.02
LSM5-208ENST00000450169 APBA2Q99767 749 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 MTMR12Q9C0I1 747 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 PRDM9Q9NQV7 894 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 ZNF221Q9UK13 617 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 AP4E1Q9UPM8 1137 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 MAU2Q9Y6X3 613 aa8.71□□□□□ -1.02
LSM5-208ENST00000450169 SCN4AP35499 1836 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 ISPDA4D126 451 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 FAM149AA5PLN7 773 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 APOC4-APOC2K7ER74 178 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 NRP1O14786 923 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 RAD51BO15315 384 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 B4GAT1O43505 415 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 RASAL1O95294 804 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 APOC2P02655 101 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 CTRB1P17538 263 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 CD40LGP29965 261 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 S100A5P33763 92 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 EIF2B5Q13144 721 aaKnown RBP8.7□□□□□ -1.02
LSM5-208ENST00000450169 CDK10Q15131 360 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 ATP6AP1Q15904 470 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 INSCQ1MX18 579 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 BOLA3Q53S33 107 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 CYBRD1Q53TN4 286 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 KCNT1Q5JUK3 1230 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 TBCELQ5QJ74 424 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 FAM182BQ5T319 152 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 NXNQ6DKJ4 435 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 CTRB2Q6GPI1 263 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 LRRC8EQ6NSJ5 796 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 DNAJC24Q6P3W2 148 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 SMIM5Q71RC9 77 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 SV2AQ7L0J3 742 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 LINC00523Q86TU6 105 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 DHFR2Q86XF0 187 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 CLEC10AQ8IUN9 316 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 SLC4A11Q8NBS3 891 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 SIMC1Q8NDZ2 872 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 OR2T34Q8NGX1 318 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 OR2T3Q8NH03 318 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 CHAC2Q8WUX2 184 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 ZNF560Q96MR9 790 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 VPS35Q96QK1 796 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 CALN1Q9BXU9 219 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 ILKAPQ9H0C8 392 aaPredicted RBP8.7□□□□□ -1.02
LSM5-208ENST00000450169 SPAG4Q9NPE6 437 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 C12orf4Q9NQ89 552 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 SMPD3Q9NY59 655 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms