RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 HUS1O60921 280 aa13.82□□□□□ -0.2
POLR1B-209ENST00000448770 MT-CO1P00395 513 aa13.82□□□□□ -0.2
POLR1B-209ENST00000448770 APOA4P06727 396 aa13.82□□□□□ -0.2
POLR1B-209ENST00000448770 DARSP14868 501 aaKnown RBP13.82□□□□□ -0.2
POLR1B-209ENST00000448770 GJA5P36382 358 aa13.82□□□□□ -0.2
POLR1B-209ENST00000448770 RANBP1P43487 201 aa13.82□□□□□ -0.2
POLR1B-209ENST00000448770 AFF1P51825 1210 aaKnown RBP13.82□□□□□ -0.2
POLR1B-209ENST00000448770 RAB10P61026 200 aa13.82□□□□□ -0.2
POLR1B-209ENST00000448770 MTX3Q5HYI7 312 aa13.82□□□□□ -0.2
POLR1B-209ENST00000448770 ERO1BQ86YB8 467 aa13.82□□□□□ -0.2
POLR1B-209ENST00000448770 TMEM126BQ8IUX1 230 aa13.82□□□□□ -0.2
POLR1B-209ENST00000448770 NUP93Q8N1F7 819 aa13.82□□□□□ -0.2
POLR1B-209ENST00000448770 SPPL2BQ8TCT7 592 aa13.82□□□□□ -0.2
POLR1B-209ENST00000448770 SREK1Q8WXA9 508 aaKnown RBP13.82□□□□□ -0.2
POLR1B-209ENST00000448770 EMID1Q96A84 441 aaPredicted RBP13.82□□□□□ -0.2
POLR1B-209ENST00000448770 TNIP3Q96KP6 325 aa13.82□□□□□ -0.2
POLR1B-209ENST00000448770 ZNF560Q96MR9 790 aa13.82□□□□□ -0.2
POLR1B-209ENST00000448770 SLC39A3Q9BRY0 314 aa13.82□□□□□ -0.2
POLR1B-209ENST00000448770 MED10Q9BTT4 135 aa13.82□□□□□ -0.2
POLR1B-209ENST00000448770 ATXN3LQ9H3M9 355 aa13.82□□□□□ -0.2
POLR1B-209ENST00000448770 MROH8Q9H579 483 aa13.82□□□□□ -0.2
POLR1B-209ENST00000448770 LIN28AQ9H9Z2 209 aaKnown RBP13.82□□□□□ -0.2
POLR1B-209ENST00000448770 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.82□□□□□ -0.2
POLR1B-209ENST00000448770 KCNH4Q9UQ05 1017 aa13.82□□□□□ -0.2
POLR1B-209ENST00000448770 RBM47A0AV96 593 aaKnown RBP13.81□□□□□ -0.2
POLR1B-209ENST00000448770 MYBPHLA2RUH7 354 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 ERI2A8K979 691 aaKnown RBP13.81□□□□□ -0.2
POLR1B-209ENST00000448770 TRIM24O15164 1050 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 HSPA1AP0DMV8 641 aaKnown RBP13.81□□□□□ -0.2
POLR1B-209ENST00000448770 HSPA1BP0DMV9 641 aaKnown RBP13.81□□□□□ -0.2
POLR1B-209ENST00000448770 CDK4P11802 303 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 PLK1P53350 603 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 YBX1P67809 324 aaKnown RBP13.81□□□□□ -0.2
POLR1B-209ENST00000448770 LRP8Q14114 963 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 CYTH1Q15438 398 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 XKR4Q5GH76 650 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 PITRM1Q5JRX3 1037 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 C6orf10Q5SRN2 563 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 ARTNQ5T4W7 220 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 CYP2R1Q6VVX0 501 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 TRIM67Q6ZTA4 783 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 KDELC2Q7Z4H8 507 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 SETD3Q86TU7 594 aaPredicted RBP13.81□□□□□ -0.2
POLR1B-209ENST00000448770 CNTN4Q8IWV2 1026 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 IPMKQ8NFU5 416 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 SLC9A7Q96T83 725 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 OLFM1Q99784 485 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 COLEC11Q9BWP8 271 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 TKTL2Q9H0I9 626 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 IGSF5Q9NSI5 407 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 CACNA2D2Q9NY47 1150 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 GTSE1Q9NYZ3 720 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 NDUFA13Q9P0J0 144 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 VTI1BQ9UEU0 232 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 ACOT9Q9Y305 439 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 PDLIM1O00151 329 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 CD4P01730 458 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 C8BP07358 591 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 IKBKEQ14164 716 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 LRRC23Q53EV4 343 aaPredicted RBP13.81□□□□□ -0.2
POLR1B-209ENST00000448770 REP15Q6BDI9 236 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 PKN3Q6P5Z2 889 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 KLHDC8BQ8IXV7 354 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 SMG8Q8ND04 991 aaKnown RBP13.81□□□□□ -0.2
POLR1B-209ENST00000448770 LPGAT1Q92604 370 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 DLG3Q92796 817 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 ASB9Q96DX5 294 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 Q9H521 79 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 TRPC7Q9HCX4 862 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 NDFIP2Q9NV92 336 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 PLK2Q9NYY3 685 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 OR12D3Q9UGF7 316 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 MID2Q9UJV3 735 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 TRHDEQ9UKU6 1024 aa13.81□□□□□ -0.2
POLR1B-209ENST00000448770 ZNF236Q9UL36 1845 aa13.8□□□□□ -0.2
POLR1B-209ENST00000448770 hCG_2014768A0A024R1R8 64 aa13.8□□□□□ -0.2
POLR1B-209ENST00000448770 MAGEB16A2A368 324 aa13.8□□□□□ -0.2
POLR1B-209ENST00000448770 HHLA1C9JL84 531 aa13.8□□□□□ -0.2
POLR1B-209ENST00000448770 CXCL11O14625 94 aa13.8□□□□□ -0.2
POLR1B-209ENST00000448770 GABRDO14764 452 aa13.8□□□□□ -0.2
POLR1B-209ENST00000448770 CACNG3O60359 315 aa13.8□□□□□ -0.2
POLR1B-209ENST00000448770 PENKP01210 267 aaPredicted RBP13.8□□□□□ -0.2
POLR1B-209ENST00000448770 KCNE1P15382 129 aa13.8□□□□□ -0.2
POLR1B-209ENST00000448770 CDH2P19022 906 aaPredicted RBP13.8□□□□□ -0.2
POLR1B-209ENST00000448770 TSPAN8P19075 237 aa13.8□□□□□ -0.2
POLR1B-209ENST00000448770 ADSLP30566 484 aaPredicted RBP13.8□□□□□ -0.2
POLR1B-209ENST00000448770 EMP3P54852 163 aa13.8□□□□□ -0.2
POLR1B-209ENST00000448770 PDAP1Q13442 181 aaKnown RBP13.8□□□□□ -0.2
POLR1B-209ENST00000448770 SV2CQ496J9 727 aa13.8□□□□□ -0.2
POLR1B-209ENST00000448770 LAYNQ6UX15 382 aa13.8□□□□□ -0.2
POLR1B-209ENST00000448770 CHSY3Q70JA7 882 aa13.8□□□□□ -0.2
POLR1B-209ENST00000448770 ARHGAP12Q8IWW6 846 aa13.8□□□□□ -0.2
POLR1B-209ENST00000448770 MYO1HQ8N1T3 1032 aa13.8□□□□□ -0.2
POLR1B-209ENST00000448770 DTNBP1Q96EV8 351 aa13.8□□□□□ -0.2
POLR1B-209ENST00000448770 PCED1BQ96HM7 432 aa13.8□□□□□ -0.2
POLR1B-209ENST00000448770 ELMO2Q96JJ3 720 aa13.8□□□□□ -0.2
POLR1B-209ENST00000448770 ZFRQ96KR1 1074 aaKnown RBP13.8□□□□□ -0.2
POLR1B-209ENST00000448770 FICDQ9BVA6 458 aa13.8□□□□□ -0.2
POLR1B-209ENST00000448770 EPS15L1Q9UBC2 864 aa13.8□□□□□ -0.2
POLR1B-209ENST00000448770 DMTF1Q9Y222 760 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms