RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 EPAS1Q99814 870 aa16.09■□□□□ 0.17
SPTLC1P1-201ENST00000447199 FUCA2Q9BTY2 467 aa16.09■□□□□ 0.17
SPTLC1P1-201ENST00000447199 CALN1Q9BXU9 219 aa16.09■□□□□ 0.17
SPTLC1P1-201ENST00000447199 OSBPL1AQ9BXW6 950 aa16.09■□□□□ 0.17
SPTLC1P1-201ENST00000447199 AIPL1Q9NZN9 384 aa16.09■□□□□ 0.17
SPTLC1P1-201ENST00000447199 ITM2BQ9Y287 266 aa16.09■□□□□ 0.17
SPTLC1P1-201ENST00000447199 MFHAS1Q9Y4C4 1052 aa16.09■□□□□ 0.17
SPTLC1P1-201ENST00000447199 GPSM3Q9Y4H4 160 aa16.09■□□□□ 0.17
SPTLC1P1-201ENST00000447199 IGSF10Q6WRI0 2623 aa16.08■□□□□ 0.17
SPTLC1P1-201ENST00000447199 IGLON5A6NGN9 336 aa16.08■□□□□ 0.16
SPTLC1P1-201ENST00000447199 A6NNZ2 444 aa16.08■□□□□ 0.16
SPTLC1P1-201ENST00000447199 FGF10O15520 208 aaPredicted RBP16.08■□□□□ 0.16
SPTLC1P1-201ENST00000447199 ATMINO43313 823 aaPredicted RBP16.08■□□□□ 0.16
SPTLC1P1-201ENST00000447199 SIGLEC6O43699 453 aa16.08■□□□□ 0.16
SPTLC1P1-201ENST00000447199 CREB3O43889 395 aa16.08■□□□□ 0.16
SPTLC1P1-201ENST00000447199 PIAS2O75928 621 aa16.08■□□□□ 0.16
SPTLC1P1-201ENST00000447199 UGT2B4P06133 528 aa16.08■□□□□ 0.16
SPTLC1P1-201ENST00000447199 ACP1P24666 158 aa16.08■□□□□ 0.16
SPTLC1P1-201ENST00000447199 HTR7P34969 479 aa16.08■□□□□ 0.16
SPTLC1P1-201ENST00000447199 PRKCIP41743 596 aa16.08■□□□□ 0.16
SPTLC1P1-201ENST00000447199 ZNF211Q13398 564 aaPredicted RBP16.08■□□□□ 0.16
SPTLC1P1-201ENST00000447199 FZD2Q14332 565 aa16.08■□□□□ 0.16
SPTLC1P1-201ENST00000447199 IQCB1Q15051 598 aa16.08■□□□□ 0.16
SPTLC1P1-201ENST00000447199 CYP4V2Q6ZWL3 525 aaPredicted RBP16.08■□□□□ 0.16
SPTLC1P1-201ENST00000447199 ZNF571Q7Z3V5 609 aaPredicted RBP16.08■□□□□ 0.16
SPTLC1P1-201ENST00000447199 DNAAF5Q86Y56 855 aa16.08■□□□□ 0.16
SPTLC1P1-201ENST00000447199 DCP2Q8IU60 420 aaKnown RBP16.08■□□□□ 0.16
SPTLC1P1-201ENST00000447199 RYBPQ8N488 228 aaPredicted RBP16.08■□□□□ 0.16
SPTLC1P1-201ENST00000447199 NETO2Q8NC67 525 aa16.08■□□□□ 0.16
SPTLC1P1-201ENST00000447199 OR4C6Q8NH72 309 aa16.08■□□□□ 0.16
SPTLC1P1-201ENST00000447199 RFFLQ8WZ73 363 aa16.08■□□□□ 0.16
SPTLC1P1-201ENST00000447199 KLHL32Q96NJ5 620 aa16.08■□□□□ 0.16
SPTLC1P1-201ENST00000447199 NAP1L5Q96NT1 182 aaPredicted RBP16.08■□□□□ 0.16
SPTLC1P1-201ENST00000447199 HAUS4Q9H6D7 363 aa16.08■□□□□ 0.16
SPTLC1P1-201ENST00000447199 LRRC19Q9H756 370 aa16.08■□□□□ 0.16
SPTLC1P1-201ENST00000447199 CATSPERBQ9H7T0 1116 aa16.08■□□□□ 0.16
SPTLC1P1-201ENST00000447199 PARVAQ9NVD7 372 aa16.08■□□□□ 0.16
SPTLC1P1-201ENST00000447199 KNTC1P50748 2209 aa16.08■□□□□ 0.16
SPTLC1P1-201ENST00000447199 SPTY2D1-AS1A0A0U1RR47 76 aa16.07■□□□□ 0.16
SPTLC1P1-201ENST00000447199 TMEM191CA6NGB0 347 aa16.07■□□□□ 0.16
SPTLC1P1-201ENST00000447199 SMTNL1A8MU46 457 aa16.07■□□□□ 0.16
SPTLC1P1-201ENST00000447199 GZMAP12544 262 aa16.07■□□□□ 0.16
SPTLC1P1-201ENST00000447199 TNFAIP3P21580 790 aa16.07■□□□□ 0.16
SPTLC1P1-201ENST00000447199 ZNF165P49910 485 aa16.07■□□□□ 0.16
SPTLC1P1-201ENST00000447199 CYP4F3Q08477 520 aa16.07■□□□□ 0.16
SPTLC1P1-201ENST00000447199 CYTH1Q15438 398 aa16.07■□□□□ 0.16
SPTLC1P1-201ENST00000447199 CA9Q16790 459 aa16.07■□□□□ 0.16
SPTLC1P1-201ENST00000447199 TPRG1LQ5T0D9 272 aa16.07■□□□□ 0.16
SPTLC1P1-201ENST00000447199 GDPD4Q6W3E5 623 aa16.07■□□□□ 0.16
SPTLC1P1-201ENST00000447199 PTAR1Q7Z6K3 402 aaPredicted RBP16.07■□□□□ 0.16
SPTLC1P1-201ENST00000447199 PDCD7Q8N8D1 485 aaKnown RBP16.07■□□□□ 0.16
SPTLC1P1-201ENST00000447199 DENND6BQ8NEG7 585 aa16.07■□□□□ 0.16
SPTLC1P1-201ENST00000447199 GDAP1L1Q96MZ0 367 aa16.07■□□□□ 0.16
SPTLC1P1-201ENST00000447199 PEBP4Q96S96 227 aa16.07■□□□□ 0.16
SPTLC1P1-201ENST00000447199 TRIM7Q9C029 511 aa16.07■□□□□ 0.16
SPTLC1P1-201ENST00000447199 PDFQ9HBH1 243 aa16.07■□□□□ 0.16
SPTLC1P1-201ENST00000447199 GPATCH2LQ9NWQ4 482 aa16.07■□□□□ 0.16
SPTLC1P1-201ENST00000447199 DKK3Q9UBP4 350 aa16.07■□□□□ 0.16
SPTLC1P1-201ENST00000447199 LHX3Q9UBR4 397 aa16.07■□□□□ 0.16
SPTLC1P1-201ENST00000447199 RAXQ9Y2V3 346 aa16.07■□□□□ 0.16
SPTLC1P1-201ENST00000447199 CACNA1GO43497 2377 aa16.06■□□□□ 0.16
SPTLC1P1-201ENST00000447199 TRPM6Q9BX84 2022 aa16.06■□□□□ 0.16
SPTLC1P1-201ENST00000447199 LY6G6EA0A0G2JKS1 128 aa16.06■□□□□ 0.16
SPTLC1P1-201ENST00000447199 TMCO5BA8MYB1 307 aa16.06■□□□□ 0.16
SPTLC1P1-201ENST00000447199 DDX3XO00571 662 aaKnown RBP eCLIP16.06■□□□□ 0.16
SPTLC1P1-201ENST00000447199 INSIG1O15503 277 aa16.06■□□□□ 0.16
SPTLC1P1-201ENST00000447199 RABIFP47224 123 aa16.06■□□□□ 0.16
SPTLC1P1-201ENST00000447199 PFN3P60673 137 aa16.06■□□□□ 0.16
SPTLC1P1-201ENST00000447199 ASIC2Q16515 512 aa16.06■□□□□ 0.16
SPTLC1P1-201ENST00000447199 HES3Q5TGS1 186 aa16.06■□□□□ 0.16
SPTLC1P1-201ENST00000447199 CAVIN1Q6NZI2 390 aaKnown RBP16.06■□□□□ 0.16
SPTLC1P1-201ENST00000447199 ZNF354CQ86Y25 554 aa16.06■□□□□ 0.16
SPTLC1P1-201ENST00000447199 CACTIN-AS1Q8N1I8 211 aa16.06■□□□□ 0.16
SPTLC1P1-201ENST00000447199 FNIP1Q8TF40 1166 aa16.06■□□□□ 0.16
SPTLC1P1-201ENST00000447199 CENPTQ96BT3 561 aa16.06■□□□□ 0.16
SPTLC1P1-201ENST00000447199 ARHGEF26Q96DR7 871 aa16.06■□□□□ 0.16
SPTLC1P1-201ENST00000447199 CPEB1Q9BZB8 566 aaKnown RBP16.06■□□□□ 0.16
SPTLC1P1-201ENST00000447199 KLF15Q9UIH9 416 aa16.06■□□□□ 0.16
SPTLC1P1-201ENST00000447199 AP4E1Q9UPM8 1137 aa16.06■□□□□ 0.16
SPTLC1P1-201ENST00000447199 U3KQA8 63 aa16.06■□□□□ 0.16
SPTLC1P1-201ENST00000447199 TSPAN11A1L157 253 aa16.05■□□□□ 0.16
SPTLC1P1-201ENST00000447199 EIF3CLB5ME19 914 aaKnown RBP16.05■□□□□ 0.16
SPTLC1P1-201ENST00000447199 SCAMP1O15126 338 aa16.05■□□□□ 0.16
SPTLC1P1-201ENST00000447199 PRAMEF11O60813 436 aa16.05■□□□□ 0.16
SPTLC1P1-201ENST00000447199 IGSF6O95976 241 aa16.05■□□□□ 0.16
SPTLC1P1-201ENST00000447199 FTLP02792 175 aaPredicted RBP16.05■□□□□ 0.16
SPTLC1P1-201ENST00000447199 CSF2P04141 144 aa16.05■□□□□ 0.16
SPTLC1P1-201ENST00000447199 JUPP14923 745 aa16.05■□□□□ 0.16
SPTLC1P1-201ENST00000447199 NME1P15531 152 aaKnown RBP16.05■□□□□ 0.16
SPTLC1P1-201ENST00000447199 TIMP2P16035 220 aa16.05■□□□□ 0.16
SPTLC1P1-201ENST00000447199 PSMA2P25787 234 aa16.05■□□□□ 0.16
SPTLC1P1-201ENST00000447199 HNF1BP35680 557 aa16.05■□□□□ 0.16
SPTLC1P1-201ENST00000447199 NDST2P52849 883 aa16.05■□□□□ 0.16
SPTLC1P1-201ENST00000447199 TPI1P60174 286 aa16.05■□□□□ 0.16
SPTLC1P1-201ENST00000447199 RHOAP61586 193 aa16.05■□□□□ 0.16
SPTLC1P1-201ENST00000447199 TARDBPQ13148 414 aaKnown RBP eCLIP16.05■□□□□ 0.16
SPTLC1P1-201ENST00000447199 SGCGQ13326 291 aa16.05■□□□□ 0.16
SPTLC1P1-201ENST00000447199 NR1I3Q14994 352 aa16.05■□□□□ 0.16
SPTLC1P1-201ENST00000447199 FILIP1LQ4L180 1135 aa16.05■□□□□ 0.16
SPTLC1P1-201ENST00000447199 ZNF542PQ5EBM4 170 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms