RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 SLC35F3Q8IY50 421 aa24.77■■□□□ 1.56
PMS1-214ENST00000446877 PHACTR4Q8IZ21 702 aa24.77■■□□□ 1.56
PMS1-214ENST00000446877 RBFAQ8N0V3 343 aa24.77■■□□□ 1.56
PMS1-214ENST00000446877 TRPM6Q9BX84 2022 aa24.76■■□□□ 1.55
PMS1-214ENST00000446877 KRIT1O00522 736 aa24.76■■□□□ 1.55
PMS1-214ENST00000446877 GCATO75600 419 aa24.76■■□□□ 1.55
PMS1-214ENST00000446877 SCNN1AP37088 669 aa24.76■■□□□ 1.55
PMS1-214ENST00000446877 ABL2P42684 1182 aa24.76■■□□□ 1.55
PMS1-214ENST00000446877 GEMIN4P57678 1058 aaKnown RBP24.76■■□□□ 1.55
PMS1-214ENST00000446877 C6orf132Q5T0Z8 1188 aa24.76■■□□□ 1.55
PMS1-214ENST00000446877 CLEC14AQ86T13 490 aa24.76■■□□□ 1.55
PMS1-214ENST00000446877 OR6K2Q8NGY2 324 aa24.76■■□□□ 1.55
PMS1-214ENST00000446877 TBATAQ96M53 351 aa24.76■■□□□ 1.55
PMS1-214ENST00000446877 CCDC3Q9BQI4 270 aa24.76■■□□□ 1.55
PMS1-214ENST00000446877 C1QTNF7Q9BXJ2 289 aa24.76■■□□□ 1.55
PMS1-214ENST00000446877 TCEAL2Q9H3H9 227 aaPredicted RBP24.76■■□□□ 1.55
PMS1-214ENST00000446877 ZNF212Q9UDV6 495 aa24.76■■□□□ 1.55
PMS1-214ENST00000446877 PADI4Q9UM07 663 aa24.76■■□□□ 1.55
PMS1-214ENST00000446877 DOLKQ9UPQ8 538 aa24.76■■□□□ 1.55
PMS1-214ENST00000446877 CXorf51AA0A1B0GTR3 108 aa24.75■■□□□ 1.55
PMS1-214ENST00000446877 GKP32189 559 aa24.75■■□□□ 1.55
PMS1-214ENST00000446877 YPEL5P62699 121 aa24.75■■□□□ 1.55
PMS1-214ENST00000446877 CLN3Q13286 438 aa24.75■■□□□ 1.55
PMS1-214ENST00000446877 VPS36Q86VN1 386 aa24.75■■□□□ 1.55
PMS1-214ENST00000446877 SCG3Q8WXD2 468 aaKnown RBP24.75■■□□□ 1.55
PMS1-214ENST00000446877 CENPTQ96BT3 561 aa24.75■■□□□ 1.55
PMS1-214ENST00000446877 CCNL2Q96S94 520 aaPredicted RBP24.75■■□□□ 1.55
PMS1-214ENST00000446877 PPARGC1AQ9UBK2 798 aaKnown RBP24.75■■□□□ 1.55
PMS1-214ENST00000446877 RWDD2AQ9UIY3 292 aa24.75■■□□□ 1.55
PMS1-214ENST00000446877 GGT7Q9UJ14 662 aa24.75■■□□□ 1.55
PMS1-214ENST00000446877 HPCAL4Q9UM19 191 aa24.75■■□□□ 1.55
PMS1-214ENST00000446877 ITM2BQ9Y287 266 aa24.75■■□□□ 1.55
PMS1-214ENST00000446877 ACTL7AQ9Y615 435 aa24.75■■□□□ 1.55
PMS1-214ENST00000446877 MYO18BQ8IUG5 2567 aa24.74■■□□□ 1.55
PMS1-214ENST00000446877 PMS2P1A4D2B8 440 aa24.74■■□□□ 1.55
PMS1-214ENST00000446877 YY2O15391 372 aa24.74■■□□□ 1.55
PMS1-214ENST00000446877 POP4O95707 220 aaKnown RBP24.74■■□□□ 1.55
PMS1-214ENST00000446877 ITGA2BP08514 1039 aa24.74■■□□□ 1.55
PMS1-214ENST00000446877 ACVRL1P37023 503 aa24.74■■□□□ 1.55
PMS1-214ENST00000446877 MTIF2P46199 727 aaKnown RBP24.74■■□□□ 1.55
PMS1-214ENST00000446877 GABRB2P47870 512 aa24.74■■□□□ 1.55
PMS1-214ENST00000446877 SNRPD1P62314 119 aaKnown RBP24.74■■□□□ 1.55
PMS1-214ENST00000446877 TTC7BQ86TV6 843 aa24.74■■□□□ 1.55
PMS1-214ENST00000446877 FAM131BQ86XD5 332 aa24.74■■□□□ 1.55
PMS1-214ENST00000446877 FAM71AQ8IYT1 594 aa24.74■■□□□ 1.55
PMS1-214ENST00000446877 MSANTD4Q8NCY6 345 aa24.74■■□□□ 1.55
PMS1-214ENST00000446877 LRRC61Q9BV99 259 aa24.74■■□□□ 1.55
PMS1-214ENST00000446877 OSBPL1AQ9BXW6 950 aa24.74■■□□□ 1.55
PMS1-214ENST00000446877 GULP1Q9UBP9 304 aa24.74■■□□□ 1.55
PMS1-214ENST00000446877 GOLGA8SH3BPF8 625 aa24.73■■□□□ 1.55
PMS1-214ENST00000446877 TMX2-CTNND1H3BSU7 103 aa24.73■■□□□ 1.55
PMS1-214ENST00000446877 PYCARD-AS1I3L0S3 204 aa24.73■■□□□ 1.55
PMS1-214ENST00000446877 UGT2B4P06133 528 aa24.73■■□□□ 1.55
PMS1-214ENST00000446877 PNMA6AP0CW24 399 aaPredicted RBP24.73■■□□□ 1.55
PMS1-214ENST00000446877 TSHRP16473 764 aa24.73■■□□□ 1.55
PMS1-214ENST00000446877 FLT3P36888 993 aa24.73■■□□□ 1.55
PMS1-214ENST00000446877 PPARDQ03181 441 aa24.73■■□□□ 1.55
PMS1-214ENST00000446877 MYLK3Q32MK0 819 aa24.73■■□□□ 1.55
PMS1-214ENST00000446877 ARL13BQ3SXY8 428 aa24.73■■□□□ 1.55
PMS1-214ENST00000446877 XYLT1Q86Y38 959 aa24.73■■□□□ 1.55
PMS1-214ENST00000446877 OR2AP1Q8NGE2 309 aa24.73■■□□□ 1.55
PMS1-214ENST00000446877 AJAP1Q9UKB5 411 aaPredicted RBP24.73■■□□□ 1.55
PMS1-214ENST00000446877 TOR1BO14657 336 aa24.72■■□□□ 1.55
PMS1-214ENST00000446877 TM7SF2O76062 418 aa24.72■■□□□ 1.55
PMS1-214ENST00000446877 WISP1O95388 367 aa24.72■■□□□ 1.55
PMS1-214ENST00000446877 GJB6O95452 261 aa24.72■■□□□ 1.55
PMS1-214ENST00000446877 CD160O95971 181 aa24.72■■□□□ 1.55
PMS1-214ENST00000446877 GSRP00390 522 aa24.72■■□□□ 1.55
PMS1-214ENST00000446877 CDH5P33151 784 aaPredicted RBP24.72■■□□□ 1.55
PMS1-214ENST00000446877 BLKP51451 505 aa24.72■■□□□ 1.55
PMS1-214ENST00000446877 ARTNQ5T4W7 220 aa24.72■■□□□ 1.55
PMS1-214ENST00000446877 RWDD4Q6NW29 188 aaKnown RBP24.72■■□□□ 1.55
PMS1-214ENST00000446877 FSTL5Q8N475 847 aaPredicted RBP24.72■■□□□ 1.55
PMS1-214ENST00000446877 CFAP57Q96MR6 1250 aa24.72■■□□□ 1.55
PMS1-214ENST00000446877 KLHL32Q96NJ5 620 aa24.72■■□□□ 1.55
PMS1-214ENST00000446877 STRADBQ9C0K7 418 aa24.72■■□□□ 1.55
PMS1-214ENST00000446877 SIX2Q9NPC8 291 aa24.72■■□□□ 1.55
PMS1-214ENST00000446877 GTF3C3Q9Y5Q9 886 aa24.72■■□□□ 1.55
PMS1-214ENST00000446877 HEMK1Q9Y5R4 338 aaPredicted RBP24.72■■□□□ 1.55
PMS1-214ENST00000446877 PLD2O14939 933 aa24.71■■□□□ 1.55
PMS1-214ENST00000446877 MMP20O60882 483 aa24.71■■□□□ 1.55
PMS1-214ENST00000446877 EIF4A3P38919 411 aaKnown RBP24.71■■□□□ 1.55
PMS1-214ENST00000446877 EIF3IQ13347 325 aaKnown RBP24.71■■□□□ 1.55
PMS1-214ENST00000446877 ELOCQ15369 112 aa24.71■■□□□ 1.55
PMS1-214ENST00000446877 GDPD4Q6W3E5 623 aa24.71■■□□□ 1.55
PMS1-214ENST00000446877 MACC1Q6ZN28 852 aa24.71■■□□□ 1.55
PMS1-214ENST00000446877 PRICKLE2Q7Z3G6 844 aa24.71■■□□□ 1.55
PMS1-214ENST00000446877 JAMLQ86YT9 394 aa24.71■■□□□ 1.55
PMS1-214ENST00000446877 FBXO39Q8N4B4 442 aa24.71■■□□□ 1.55
PMS1-214ENST00000446877 ARL10Q8N8L6 244 aa24.71■■□□□ 1.55
PMS1-214ENST00000446877 CXorf40AQ8TE69 158 aa24.71■■□□□ 1.55
PMS1-214ENST00000446877 ARHGEF2Q92974 986 aaKnown RBP24.71■■□□□ 1.55
PMS1-214ENST00000446877 LIN37Q96GY3 246 aaPredicted RBP24.71■■□□□ 1.55
PMS1-214ENST00000446877 FAM117AQ9C073 453 aa24.71■■□□□ 1.55
PMS1-214ENST00000446877 CLPBQ9H078 707 aa24.71■■□□□ 1.55
PMS1-214ENST00000446877 RETREG1Q9H6L5 497 aa24.71■■□□□ 1.55
PMS1-214ENST00000446877 EPB41L5Q9HCM4 733 aa24.71■■□□□ 1.55
PMS1-214ENST00000446877 OR12D3Q9UGF7 316 aa24.71■■□□□ 1.55
PMS1-214ENST00000446877 ATXN7L1Q9ULK2 861 aaPredicted RBP24.71■■□□□ 1.55
PMS1-214ENST00000446877 FAM170AA1A519 330 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms