RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 IRF1P10914 325 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 COL6A2P12110 1019 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 GRK2P25098 689 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 CHRNA4P43681 627 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 RPS24P62847 133 aaKnown RBP15.84■□□□□ 0.13
SNX13-204ENST00000444712 BST1Q10588 318 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 BNIP1Q12981 228 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 STX3Q13277 289 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 FASTKD1Q53R41 847 aaKnown RBP15.84■□□□□ 0.13
SNX13-204ENST00000444712 CRLF3Q8IUI8 442 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 ELMOD1Q8N336 334 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 FITM2Q8N6M3 262 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 C2CD4AQ8NCU7 369 aaPredicted RBP15.84■□□□□ 0.13
SNX13-204ENST00000444712 PSKH2Q96QS6 385 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 MECRQ9BV79 373 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 ATXN3LQ9H3M9 355 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 GKN1Q9NS71 199 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 THAP1Q9NVV9 213 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 LSM7Q9UK45 103 aaKnown RBP15.84■□□□□ 0.13
SNX13-204ENST00000444712 EMCNQ9ULC0 261 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 ZNF510Q9Y2H8 683 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 A0A0D9SEW6 157 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 CFAP73A6NFT4 308 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 LRG1P02750 347 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 ATP5BP06576 529 aaKnown RBP15.84■□□□□ 0.13
SNX13-204ENST00000444712 PFKLP17858 780 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 ARFIP2P53365 341 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 HTRA4P83105 476 aaPredicted RBP15.84■□□□□ 0.13
SNX13-204ENST00000444712 SMAD3P84022 425 aaKnown RBP15.84■□□□□ 0.13
SNX13-204ENST00000444712 SMAD1Q15797 465 aaKnown RBP15.84■□□□□ 0.13
SNX13-204ENST00000444712 CNGA3Q16281 694 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 SIRPB2Q5JXA9 342 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 OTOP2Q7RTS6 562 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 KDELC2Q7Z4H8 507 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 CMC1Q7Z7K0 106 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 CLEC14AQ86T13 490 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 HJURPQ8NCD3 748 aaPredicted RBP15.84■□□□□ 0.13
SNX13-204ENST00000444712 OR7D4Q8NG98 312 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 RDH11Q8TC12 318 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 AUTS2Q8WXX7 1259 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 MRPS31Q92665 395 aaKnown RBP15.84■□□□□ 0.13
SNX13-204ENST00000444712 ATXN7L3BQ96GX2 97 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 SPON2Q9BUD6 331 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 ACE2Q9BYF1 805 aaPredicted RBP15.84■□□□□ 0.13
SNX13-204ENST00000444712 TRPC7Q9HCX4 862 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 TXLNGQ9NUQ3 528 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 RIMKLBQ9ULI2 386 aa15.84■□□□□ 0.13
SNX13-204ENST00000444712 ARIH1Q9Y4X5 557 aaPredicted RBP15.84■□□□□ 0.13
SNX13-204ENST00000444712 CEP350Q5VT06 3117 aa15.83■□□□□ 0.13
SNX13-204ENST00000444712 BRCA2P51587 3418 aa15.83■□□□□ 0.12
SNX13-204ENST00000444712 ZBBXA8MT70 800 aa15.83■□□□□ 0.12
SNX13-204ENST00000444712 SLC7A4O43246 635 aa15.83■□□□□ 0.12
SNX13-204ENST00000444712 SNNO75324 88 aaPredicted RBP15.83■□□□□ 0.12
SNX13-204ENST00000444712 H2AFYO75367 372 aaKnown RBP15.83■□□□□ 0.12
SNX13-204ENST00000444712 ADH1AP07327 375 aa15.83■□□□□ 0.12
SNX13-204ENST00000444712 CA8P35219 290 aa15.83■□□□□ 0.12
SNX13-204ENST00000444712 CD151P48509 253 aa15.83■□□□□ 0.12
SNX13-204ENST00000444712 OCRLQ01968 901 aa15.83■□□□□ 0.12
SNX13-204ENST00000444712 SLC12A1Q13621 1099 aa15.83■□□□□ 0.12
SNX13-204ENST00000444712 USP10Q14694 798 aaKnown RBP15.83■□□□□ 0.12
SNX13-204ENST00000444712 GRM3Q14832 879 aa15.83■□□□□ 0.12
SNX13-204ENST00000444712 NEPROQ6NW34 567 aa15.83■□□□□ 0.12
SNX13-204ENST00000444712 RAPH1Q70E73 1250 aa15.83■□□□□ 0.12
SNX13-204ENST00000444712 TMEM150AQ86TG1 271 aa15.83■□□□□ 0.12
SNX13-204ENST00000444712 FAM96AQ9H5X1 160 aa15.83■□□□□ 0.12
SNX13-204ENST00000444712 COPG2Q9UBF2 871 aa15.83■□□□□ 0.12
SNX13-204ENST00000444712 SLC39A10Q9ULF5 831 aa15.83■□□□□ 0.12
SNX13-204ENST00000444712 INSL6Q9Y581 213 aa15.83■□□□□ 0.12
SNX13-204ENST00000444712 CCDC78A2IDD5 438 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 MROH6A6NGR9 719 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 FGBP02675 491 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 AHSGP02765 367 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 C2P06681 752 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 ATXN1LP0C7T5 689 aaKnown RBP15.82■□□□□ 0.12
SNX13-204ENST00000444712 ARNTP27540 789 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 CRABP2P29373 138 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 KPNA2P52292 529 aaKnown RBP15.82■□□□□ 0.12
SNX13-204ENST00000444712 OVGP1Q12889 678 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 SPRED3Q2MJR0 410 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 ZNF470Q6ECI4 717 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 CLP1Q92989 425 aaKnown RBP15.82■□□□□ 0.12
SNX13-204ENST00000444712 THOC1Q96FV9 657 aaKnown RBP15.82■□□□□ 0.12
SNX13-204ENST00000444712 GCNAQ96QF7 691 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 MUC3BQ9H195 1237 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 IL21Q9HBE4 155 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 KCNK4Q9NYG8 393 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 TMEM216Q9P0N5 145 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 PRKAG2Q9UGJ0 569 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 FBXO5Q9UKT4 447 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 HELZP42694 1942 aaKnown RBP15.82■□□□□ 0.12
SNX13-204ENST00000444712 MTCL1Q9Y4B5 1905 aaKnown RBP15.82■□□□□ 0.12
SNX13-204ENST00000444712 GOLGA8TH3BQL2 631 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 NDST3O95803 873 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 SERPINE1P05121 402 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 HDCP19113 662 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 CDC25CP30307 473 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 SLC1A2P43004 574 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 CSRP3P50461 194 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 PRKAA2P54646 552 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 MSLNQ13421 630 aaPredicted RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms