RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 ANKRD62A6NC57 917 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 EEF2KO00418 725 aaKnown RBP11.03□□□□□ -0.64
SF3A1-203ENST00000444440 AP1G1O43747 822 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 PAK4O96013 591 aaPredicted RBP11.03□□□□□ -0.64
SF3A1-203ENST00000444440 FAM228BP0C875 321 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 THEGLP0DJG4 465 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 GIMD1P0DJR0 217 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 HNRNPA2B1P22626 353 aaKnown RBP11.03□□□□□ -0.64
SF3A1-203ENST00000444440 RXRGP48443 463 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 YBEYP58557 167 aaPredicted RBP11.03□□□□□ -0.64
SF3A1-203ENST00000444440 SNRPD1P62314 119 aaKnown RBP11.03□□□□□ -0.64
SF3A1-203ENST00000444440 MAPK8IP2Q13387 824 aaPredicted RBP11.03□□□□□ -0.64
SF3A1-203ENST00000444440 STAT4Q14765 748 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 SUZ12Q15022 739 aaKnown RBP11.03□□□□□ -0.64
SF3A1-203ENST00000444440 SMTNL2Q2TAL5 461 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 MYLK3Q32MK0 819 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 TDRD12Q587J7 1177 aaKnown RBP11.03□□□□□ -0.64
SF3A1-203ENST00000444440 ZNF805Q5CZA5 627 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 ERMARDQ5T6L9 678 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 AFMIDQ63HM1 303 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 PPP1R2P3Q6NXS1 205 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 NEK5Q6P3R8 708 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 ABI3BPQ7Z7G0 1075 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 IQCHQ86VS3 1027 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 ZSWIM9Q86XI8 627 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 EID2Q8N6I1 236 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 KDF1Q8NAX2 398 aaPredicted RBP11.03□□□□□ -0.64
SF3A1-203ENST00000444440 FNIP1Q8TF40 1166 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 ARHGEF26Q96DR7 871 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 IQCDQ96DY2 449 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 KLHDC7BQ96G42 594 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 PPP1R16AQ96I34 528 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 CDC6Q99741 560 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 THAP2Q9H0W7 228 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 TSPY26PQ9H489 355 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 CATSPERBQ9H7T0 1116 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 GPR27Q9NS67 375 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 ETNK2Q9NVF9 386 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 UCKL1Q9NWZ5 548 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 CWC15Q9P013 229 aaKnown RBP11.03□□□□□ -0.64
SF3A1-203ENST00000444440 TPX2Q9ULW0 747 aaKnown RBP11.03□□□□□ -0.64
SF3A1-203ENST00000444440 HPCAL4Q9UM19 191 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 NENFQ9UMX5 172 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 APOBEC2Q9Y235 224 aaKnown RBP11.03□□□□□ -0.64
SF3A1-203ENST00000444440 KNTC1P50748 2209 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 DSPP15924 2871 aaKnown RBP11.02□□□□□ -0.64
SF3A1-203ENST00000444440 FAM149AA5PLN7 773 aa11.02□□□□□ -0.65
SF3A1-203ENST00000444440 IGLON5A6NGN9 336 aa11.02□□□□□ -0.65
SF3A1-203ENST00000444440 TAF4O00268 1085 aa11.02□□□□□ -0.65
SF3A1-203ENST00000444440 AREL1O15033 823 aa11.02□□□□□ -0.65
SF3A1-203ENST00000444440 FGF10O15520 208 aaPredicted RBP11.02□□□□□ -0.65
SF3A1-203ENST00000444440 TNFSF14O43557 240 aa11.02□□□□□ -0.65
SF3A1-203ENST00000444440 DFNA5O60443 496 aa11.02□□□□□ -0.65
SF3A1-203ENST00000444440 BUB1BO60566 1050 aaPredicted RBP11.02□□□□□ -0.65
SF3A1-203ENST00000444440 PRAMEF11O60813 436 aa11.02□□□□□ -0.65
SF3A1-203ENST00000444440 POP4O95707 220 aaKnown RBP11.02□□□□□ -0.65
SF3A1-203ENST00000444440 ITGAVP06756 1048 aa11.02□□□□□ -0.65
SF3A1-203ENST00000444440 ERCC2P18074 760 aa11.02□□□□□ -0.65
SF3A1-203ENST00000444440 NUDT1P36639 197 aa11.02□□□□□ -0.65
SF3A1-203ENST00000444440 PAPOLAP51003 745 aaKnown RBP11.02□□□□□ -0.65
SF3A1-203ENST00000444440 GEMIN4P57678 1058 aaKnown RBP11.02□□□□□ -0.65
SF3A1-203ENST00000444440 RHOAP61586 193 aa11.02□□□□□ -0.65
SF3A1-203ENST00000444440 DPYSQ14117 519 aa11.02□□□□□ -0.65
SF3A1-203ENST00000444440 NFKBIBQ15653 356 aa11.02□□□□□ -0.65
SF3A1-203ENST00000444440 PARP15Q460N3 678 aa11.02□□□□□ -0.65
SF3A1-203ENST00000444440 INO80DQ53TQ3 878 aaPredicted RBP11.02□□□□□ -0.65
SF3A1-203ENST00000444440 CCDC157Q569K6 752 aa11.02□□□□□ -0.65
SF3A1-203ENST00000444440 SLC45A4Q5BKX6 768 aa11.02□□□□□ -0.65
SF3A1-203ENST00000444440 PPP6R3Q5H9R7 873 aaPredicted RBP11.02□□□□□ -0.65
SF3A1-203ENST00000444440 FBXL19Q6PCT2 694 aa11.02□□□□□ -0.65
SF3A1-203ENST00000444440 DHRS13Q6UX07 377 aa11.02□□□□□ -0.65
SF3A1-203ENST00000444440 GDPD4Q6W3E5 623 aa11.02□□□□□ -0.65
SF3A1-203ENST00000444440 CCNI2Q6ZMN8 369 aaPredicted RBP11.02□□□□□ -0.65
SF3A1-203ENST00000444440 RFX8Q6ZV50 586 aa11.02□□□□□ -0.65
SF3A1-203ENST00000444440 SLC25A45Q8N413 288 aa11.02□□□□□ -0.65
SF3A1-203ENST00000444440 SKA1Q96BD8 255 aa11.02□□□□□ -0.65
SF3A1-203ENST00000444440 CNDP2Q96KP4 475 aaKnown RBP11.02□□□□□ -0.65
SF3A1-203ENST00000444440 GDAP1L1Q96MZ0 367 aa11.02□□□□□ -0.65
SF3A1-203ENST00000444440 CALN1Q9BXU9 219 aa11.02□□□□□ -0.65
SF3A1-203ENST00000444440 SLC17A9Q9BYT1 436 aa11.02□□□□□ -0.65
SF3A1-203ENST00000444440 XPO4Q9C0E2 1151 aaKnown RBP11.02□□□□□ -0.65
SF3A1-203ENST00000444440 FTSJ1Q9UET6 329 aa11.02□□□□□ -0.65
SF3A1-203ENST00000444440 KLF15Q9UIH9 416 aa11.02□□□□□ -0.65
SF3A1-203ENST00000444440 RALYQ9UKM9 306 aaKnown RBP11.02□□□□□ -0.65
SF3A1-203ENST00000444440 PNMA8BQ9ULN7 279 aaPredicted RBP11.02□□□□□ -0.65
SF3A1-203ENST00000444440 CAPN11Q9UMQ6 739 aa11.02□□□□□ -0.65
SF3A1-203ENST00000444440 SCN8AQ9UQD0 1980 aa11.01□□□□□ -0.65
SF3A1-203ENST00000444440 ZSCAN5CA6NGD5 496 aaPredicted RBP11.01□□□□□ -0.65
SF3A1-203ENST00000444440 TRIM38O00635 465 aa11.01□□□□□ -0.65
SF3A1-203ENST00000444440 ENC1O14682 589 aa11.01□□□□□ -0.65
SF3A1-203ENST00000444440 MUSKO15146 869 aa11.01□□□□□ -0.65
SF3A1-203ENST00000444440 CBFA2T2O43439 604 aa11.01□□□□□ -0.65
SF3A1-203ENST00000444440 IGSF6O95976 241 aa11.01□□□□□ -0.65
SF3A1-203ENST00000444440 SERPING1P05155 500 aa11.01□□□□□ -0.65
SF3A1-203ENST00000444440 MYF5P13349 255 aa11.01□□□□□ -0.65
SF3A1-203ENST00000444440 TIMP2P16035 220 aa11.01□□□□□ -0.65
SF3A1-203ENST00000444440 AKT2P31751 481 aa11.01□□□□□ -0.65
SF3A1-203ENST00000444440 CASP14P31944 242 aa11.01□□□□□ -0.65
SF3A1-203ENST00000444440 IGFALSP35858 605 aa11.01□□□□□ -0.65
SF3A1-203ENST00000444440 ACADVLP49748 655 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms