RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 KAZNQ674X7 775 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 KIAA0895LQ68EN5 471 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 ALG1LQ6GMV1 187 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 LAYNQ6UX15 382 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 BBS12Q6ZW61 710 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 ERN2Q76MJ5 926 aaKnown RBP13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 CYP2U1Q7Z449 544 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 C11orf74Q86VG3 221 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 MAP7D3Q8IWC1 876 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 CADM4Q8NFZ8 388 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 FATE1Q969F0 183 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 HAUS1Q96CS2 278 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 ECHDC3Q96DC8 303 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 KLHL32Q96NJ5 620 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 HDAC8Q9BY41 377 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 BTBD1Q9H0C5 482 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 SGK2Q9HBY8 427 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 SEMA4GQ9NTN9 838 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 DONSONQ9NYP3 566 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 NCDNQ9UBB6 729 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 PCDHGA5Q9Y5G8 931 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 FADS3Q9Y5Q0 445 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 LRP4O75096 1905 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 PTPRZ1P23471 2315 aaPredicted RBP13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 DCHS1Q96JQ0 3298 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 KCNK1O00180 336 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 AREL1O15033 823 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 MATN3O15232 486 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 MAP3K13O43283 966 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 GDF9O60383 454 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 CST8O60676 142 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 ZRANB2O95218 330 aaKnown RBP eCLIP13□□□□□ -0.33
PDLIM2-212ENST00000443561 POP4O95707 220 aaKnown RBP13□□□□□ -0.33
PDLIM2-212ENST00000443561 IGSF6O95976 241 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 WNT1P04628 370 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 PRKCGP05129 697 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 MMP2P08253 660 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 ADRB3P13945 408 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 TIMP2P16035 220 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 TRAF2Q12933 501 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 RFTN1Q14699 578 aaPredicted RBP13□□□□□ -0.33
PDLIM2-212ENST00000443561 PRKD1Q15139 912 aaPredicted RBP13□□□□□ -0.33
PDLIM2-212ENST00000443561 PTPRRQ15256 657 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 ZNF805Q5CZA5 627 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 ZFYVE27Q5T4F4 411 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 SEL1L3Q68CR1 1132 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 GDPD4Q6W3E5 623 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 KDM7AQ6ZMT4 941 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 DSG4Q86SJ6 1040 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 SRLQ86TD4 932 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 CAMK1DQ8IU85 385 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 RNF10Q8N5U6 811 aaKnown RBP13□□□□□ -0.33
PDLIM2-212ENST00000443561 OR2T34Q8NGX1 318 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 OR14C36Q8NHC7 312 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 ARRDC2Q8TBH0 407 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 SMIM14Q96QK8 99 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 IL12RB2Q99665 862 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 OMDQ99983 421 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 CINPQ9BW66 212 aaPredicted RBP13□□□□□ -0.33
PDLIM2-212ENST00000443561 HEMGNQ9BXL5 484 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 CEP41Q9BYV8 373 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 CPEB1Q9BZB8 566 aaKnown RBP13□□□□□ -0.33
PDLIM2-212ENST00000443561 PCED1AQ9H1Q7 454 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 CAAP1Q9H8G2 361 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 C10orf88Q9H8K7 445 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 CAPN10Q9HC96 672 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 LZTFL1Q9NQ48 299 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 SEPT3Q9UH03 358 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 EIF2B4Q9UI10 523 aaKnown RBP13□□□□□ -0.33
PDLIM2-212ENST00000443561 GMEB2Q9UKD1 530 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 RAB23Q9ULC3 237 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 PYCARDQ9ULZ3 195 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 HEY1Q9Y5J3 304 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 KNL1Q8NG31 2342 aa13□□□□□ -0.33
PDLIM2-212ENST00000443561 DNAH14Q0VDD8 3507 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 ASCC3Q8N3C0 2202 aaKnown RBP12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 CCDC66A2RUB6 948 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 FAM47DPA6NHR8 397 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 C16orf96A6NNT2 1141 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 USP27XA6NNY8 438 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 ZBTB24O43167 697 aaPredicted RBP12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 SLC7A4O43246 635 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 NDUFS2O75306 463 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 CCDC175P0C221 793 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 ZNF806P0C7X5 589 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 CCNCP24863 283 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 MMP13P45452 471 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 RECQLP46063 649 aaPredicted RBP12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 NEK3P51956 506 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 NAP1L1P55209 391 aaKnown RBP12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 IFI35P80217 286 aaPredicted RBP12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 DSC2Q02487 901 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 KLF1Q13351 362 aaPredicted RBP12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 CSRP2Q16527 193 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 IFI16Q16666 785 aaKnown RBP12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 TMEM259Q4ZIN3 620 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 FAM46CQ5VWP2 391 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 PRR23CQ6ZRP0 262 aa12.99□□□□□ -0.33
PDLIM2-212ENST00000443561 PEX26Q7Z412 305 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms