RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 RAB7BQ96AH8 199 aa15.24■□□□□ 0.03
CSNK1E-210ENST00000442216 BIRC7Q96CA5 298 aa15.24■□□□□ 0.03
CSNK1E-210ENST00000442216 ZNF641Q96N77 438 aaPredicted RBP15.24■□□□□ 0.03
CSNK1E-210ENST00000442216 ZNF830Q96NB3 372 aaPredicted RBP15.24■□□□□ 0.03
CSNK1E-210ENST00000442216 HAUS2Q9NVX0 235 aa15.24■□□□□ 0.03
CSNK1E-210ENST00000442216 DTLQ9NZJ0 730 aa15.24■□□□□ 0.03
CSNK1E-210ENST00000442216 DKK3Q9UBP4 350 aa15.24■□□□□ 0.03
CSNK1E-210ENST00000442216 AMACRQ9UHK6 382 aa15.24■□□□□ 0.03
CSNK1E-210ENST00000442216 MYO15AQ9UKN7 3530 aa15.24■□□□□ 0.03
CSNK1E-210ENST00000442216 TBC1D3DA0A087WVF3 549 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 TBC1D3IA0A087WXS9 549 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 TBC1D3EA0A087X179 549 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 TBC1D3KA0A087X1G2 549 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 A0A1B0GTW7 788 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 MACROD2A1Z1Q3 448 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 TBC1D3FA6NER0 549 aaPredicted RBP15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 MIF4GDA9UHW6 222 aaKnown RBP15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 PRR5-ARHGAP8B1AHC4 643 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 TBC1D3LB9A6J9 549 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 RNF103O00237 685 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 KHNYNO15037 678 aaKnown RBP15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 MATN3O15232 486 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 AP1G1O43747 822 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 UGT2B4P06133 528 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 IGHV4-34P06331 123 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 CCDC175P0C221 793 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 TBC1D3HP0C7X1 549 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 ADRB3P13945 408 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 CD27P26842 260 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 NR2C2P49116 596 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 SUOXP51687 545 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 TAS2R38P59533 333 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 AP1S1P61966 158 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 ARHGAP8P85298 464 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 LMNB2Q03252 620 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 GBE1Q04446 702 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 SLC10A2Q12908 348 aaPredicted RBP15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 ZNF235Q14590 738 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 POM121L1PQ3SYA9 428 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 MARC1Q5VT66 337 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 TBC1D3GQ6DHY5 549 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 TBC1D3CQ6IPX1 549 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 FBXL19Q6PCT2 694 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 SPOCD1Q6ZMY3 1216 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 BZW1Q7L1Q6 419 aaKnown RBP15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 NT5DC3Q86UY8 548 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 RFX6Q8HWS3 928 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 KIAA2013Q8IYS2 634 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 TBC1D3Q8IZP1 549 aaPredicted RBP15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 TEX26Q8N6G2 289 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 C12orf50Q8NA57 414 aaPredicted RBP15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 OR6K2Q8NGY2 324 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 C1orf216Q8TAB5 229 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 MAML1Q92585 1016 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 MGME1Q9BQP7 344 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 NUSAP1Q9BXS6 441 aaKnown RBP15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 BRD8Q9H0E9 1235 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 AMFRQ9UKV5 643 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 EFR3BQ9Y2G0 817 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 PCDH15Q96QU1 1955 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 GVINP1Q7Z2Y8 2422 aa15.23■□□□□ 0.03
CSNK1E-210ENST00000442216 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.22■□□□□ 0.03
CSNK1E-210ENST00000442216 A0A1W2PPC4 97 aa15.22■□□□□ 0.03
CSNK1E-210ENST00000442216 FAM47DPA6NHR8 397 aa15.22■□□□□ 0.03
CSNK1E-210ENST00000442216 C16orf96A6NNT2 1141 aa15.22■□□□□ 0.03
CSNK1E-210ENST00000442216 PLK4O00444 970 aa15.22■□□□□ 0.03
CSNK1E-210ENST00000442216 LATO43561 262 aa15.22■□□□□ 0.03
CSNK1E-210ENST00000442216 FSBPO95073 299 aa15.22■□□□□ 0.03
CSNK1E-210ENST00000442216 SERPINF2P08697 491 aa15.22■□□□□ 0.03
CSNK1E-210ENST00000442216 TGM2P21980 687 aa15.22■□□□□ 0.03
CSNK1E-210ENST00000442216 GKP32189 559 aa15.22■□□□□ 0.03
CSNK1E-210ENST00000442216 MMP13P45452 471 aa15.22■□□□□ 0.03
CSNK1E-210ENST00000442216 MARCKSL1P49006 195 aa15.22■□□□□ 0.03
CSNK1E-210ENST00000442216 RWDD2BP57060 319 aa15.22■□□□□ 0.03
CSNK1E-210ENST00000442216 PPIDQ08752 370 aaKnown RBP15.22■□□□□ 0.03
CSNK1E-210ENST00000442216 PDK1Q15118 436 aa15.22■□□□□ 0.03
CSNK1E-210ENST00000442216 TRIM61Q5EBN2 209 aa15.22■□□□□ 0.03
CSNK1E-210ENST00000442216 PARS2Q7L3T8 475 aaKnown RBP15.22■□□□□ 0.03
CSNK1E-210ENST00000442216 PEX26Q7Z412 305 aa15.22■□□□□ 0.03
CSNK1E-210ENST00000442216 KRT35Q92764 455 aa15.22■□□□□ 0.03
CSNK1E-210ENST00000442216 EXOC2Q96KP1 924 aa15.22■□□□□ 0.03
CSNK1E-210ENST00000442216 KLHL32Q96NJ5 620 aa15.22■□□□□ 0.03
CSNK1E-210ENST00000442216 OLFM3Q96PB7 478 aa15.22■□□□□ 0.03
CSNK1E-210ENST00000442216 NUDCD1Q96RS6 583 aa15.22■□□□□ 0.03
CSNK1E-210ENST00000442216 SUV39H2Q9H5I1 410 aa15.22■□□□□ 0.03
CSNK1E-210ENST00000442216 ATP13A3Q9H7F0 1226 aa15.22■□□□□ 0.03
CSNK1E-210ENST00000442216 TRIM10Q9UDY6 481 aa15.22■□□□□ 0.03
CSNK1E-210ENST00000442216 EIF2B4Q9UI10 523 aaKnown RBP15.22■□□□□ 0.03
CSNK1E-210ENST00000442216 SLC6A14Q9UN76 642 aa15.22■□□□□ 0.03
CSNK1E-210ENST00000442216 ATXN2Q99700 1313 aaKnown RBP15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 LRRK1Q38SD2 2015 aa15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 ZNF292O60281 2723 aa15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 hCG_1818297A0A087WSY0 165 aa15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 A0A0U1RQJ8 604 aa15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 TSPAN11A1L157 253 aa15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 PPP1R12AO14974 1030 aaPredicted RBP15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 BCAT2O15382 392 aaPredicted RBP15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 INSIG1O15503 277 aa15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 CR2P20023 1033 aa15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 CES1P23141 567 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms