RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 TEX264Q9Y6I9 313 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 LRRC72A6NJI9 287 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 CAPN14A8MX76 684 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 LOC730098B7Z3J9 87 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 DLDP09622 509 aaKnown RBP7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 PFKLP17858 780 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 CDH6P55285 790 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 GEMIN4P57678 1058 aaKnown RBP7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 SULT2A1Q06520 285 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 PRKD1Q15139 912 aaPredicted RBP7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 PPP1R21Q6ZMI0 780 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 TMPRSS6Q8IU80 811 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 SPEM1Q8N4L4 309 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 MGARPQ8TDB4 240 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 SETD7Q8WTS6 366 aaKnown RBP7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 NRG4Q8WWG1 115 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 ZNF75CPQ92670 426 aaPredicted RBP7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 N4BP2L2Q92802 583 aaPredicted RBP7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 TTC25Q96NG3 672 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 TM6SF2Q9BZW4 377 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 RNF38Q9H0F5 515 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 NSRP1Q9H0G5 558 aaKnown RBP7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 LHX5Q9H2C1 402 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 ACSS3Q9H6R3 686 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 PPCSQ9HAB8 311 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 ELOVL2Q9NXB9 296 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 IP6K2Q9UHH9 426 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 TIMM44O43615 452 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 LUC7L3O95232 432 aaKnown RBP7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 GAS8O95995 478 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 LMNAP02545 664 aaKnown RBP7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 TSHRP16473 764 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 TACR2P21452 398 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 SERPINB6P35237 376 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 ADCY8P40145 1251 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 PSMD8P48556 350 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 BLMHQ13867 455 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 PTPN20Q4JDL3 420 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 TFDP3Q5H9I0 405 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 WDR45BQ5MNZ6 344 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 BBS12Q6ZW61 710 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 CCDC25Q86WR0 208 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 FCRL2Q96LA5 508 aaPredicted RBP7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 PEBP4Q96S96 227 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 PLA2G2FQ9BZM2 168 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 USP29Q9HBJ7 922 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 TBC1D30Q9Y2I9 924 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 RASA4BC9J798 803 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 RASA4O43374 803 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 KIF1CO43896 1103 aaKnown RBP7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 CD48P09326 243 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 HLA-EP13747 358 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 HMGA1P17096 107 aaKnown RBP7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 THOP1P52888 689 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 SF3A3Q12874 501 aaKnown RBP eCLIP7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 TEX44Q53QW1 395 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 KIAA2013Q8IYS2 634 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 TERB1Q8NA31 727 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 KHSRPQ92945 711 aaKnown RBP eCLIP7.49□□□□□ -1.217e-7■■■■□ 21.1
CDC42BPA-208ENST00000442054 ANKRD27Q96NW4 1050 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 BTBD1Q9H0C5 482 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 KLHL11Q9NVR0 708 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 RAPGEFL1Q9UHV5 662 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 SMG5Q9UPR3 1016 aaKnown RBP7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 HEY1Q9Y5J3 304 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 RAD54BQ9Y620 910 aa7.49□□□□□ -1.21
CDC42BPA-208ENST00000442054 KLF11O14901 512 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 ABCB7O75027 752 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 GABBR2O75899 941 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 LINGO3P0C6S8 592 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 GLULP15104 373 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 CCNFP41002 786 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 DNAJC3Q13217 504 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 RAB6CQ53S08 254 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 ANKRD20A2Q5SQ80 823 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 ANKRD20A1Q5TYW2 823 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 ANKRD20A3Q5VUR7 823 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 ZNF534Q76KX8 674 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 RD3Q7Z3Z2 195 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 CLNKQ7Z7G1 428 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 TAC4Q86UU9 113 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 RFWD2Q8NHY2 731 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 JOSD2Q8TAC2 188 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 CLEC4CQ8WTT0 213 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 PPP1R16AQ96I34 528 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 CFAP57Q96MR6 1250 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 TBC1D10AQ9BXI6 508 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 RAB6CQ9H0N0 254 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 TRABDQ9H4I3 376 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 RNPEPL1Q9HAU8 725 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 MKS1Q9NXB0 559 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 SENP1Q9P0U3 644 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 TBK1Q9UHD2 729 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 FBXO10Q9UK96 956 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 CENPFP49454 3210 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 ARHGAP42A6NI28 874 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 H7C0C1 242 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 KHNYNO15037 678 aaKnown RBP7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 STC2O76061 302 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 TGDSO95455 350 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms