RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 SKIV2L2P42285 1042 aaKnown RBP13.31□□□□□ -0.28
CPSF4-206ENST00000441580 CHRNA4P43681 627 aa13.31□□□□□ -0.28
CPSF4-206ENST00000441580 ARCN1P48444 511 aaKnown RBP13.31□□□□□ -0.28
CPSF4-206ENST00000441580 CD151P48509 253 aa13.31□□□□□ -0.28
CPSF4-206ENST00000441580 CLCN5P51795 746 aa13.31□□□□□ -0.28
CPSF4-206ENST00000441580 RPS24P62847 133 aaKnown RBP13.31□□□□□ -0.28
CPSF4-206ENST00000441580 NSUN2Q08J23 767 aaKnown RBP eCLIP13.31□□□□□ -0.28
CPSF4-206ENST00000441580 RALGPS1Q5JS13 557 aa13.31□□□□□ -0.28
CPSF4-206ENST00000441580 ZNF470Q6ECI4 717 aa13.31□□□□□ -0.28
CPSF4-206ENST00000441580 FSTL4Q6MZW2 842 aa13.31□□□□□ -0.28
CPSF4-206ENST00000441580 Q6ZNB5 142 aa13.31□□□□□ -0.28
CPSF4-206ENST00000441580 RTL10Q7L3V2 364 aa13.31□□□□□ -0.28
CPSF4-206ENST00000441580 OTOP2Q7RTS6 562 aa13.31□□□□□ -0.28
CPSF4-206ENST00000441580 CLEC14AQ86T13 490 aa13.31□□□□□ -0.28
CPSF4-206ENST00000441580 TMEM150AQ86TG1 271 aa13.31□□□□□ -0.28
CPSF4-206ENST00000441580 CFAP52Q8N1V2 620 aa13.31□□□□□ -0.28
CPSF4-206ENST00000441580 PGBD5Q8N414 524 aa13.31□□□□□ -0.28
CPSF4-206ENST00000441580 SLC25A41Q8N5S1 370 aa13.31□□□□□ -0.28
CPSF4-206ENST00000441580 C2CD4AQ8NCU7 369 aaPredicted RBP13.31□□□□□ -0.28
CPSF4-206ENST00000441580 OR7D4Q8NG98 312 aa13.31□□□□□ -0.28
CPSF4-206ENST00000441580 PPP1R14CQ8TAE6 165 aa13.31□□□□□ -0.28
CPSF4-206ENST00000441580 RDH11Q8TC12 318 aa13.31□□□□□ -0.28
CPSF4-206ENST00000441580 SP7Q8TDD2 431 aaPredicted RBP13.31□□□□□ -0.28
CPSF4-206ENST00000441580 PTPRN2Q92932 1015 aa13.31□□□□□ -0.28
CPSF4-206ENST00000441580 AGAP2Q99490 1192 aa13.31□□□□□ -0.28
CPSF4-206ENST00000441580 ACE2Q9BYF1 805 aaPredicted RBP13.31□□□□□ -0.28
CPSF4-206ENST00000441580 C12orf65Q9H3J6 166 aaKnown RBP13.31□□□□□ -0.28
CPSF4-206ENST00000441580 FAM96AQ9H5X1 160 aa13.31□□□□□ -0.28
CPSF4-206ENST00000441580 ZNF334Q9HCZ1 680 aaPredicted RBP13.31□□□□□ -0.28
CPSF4-206ENST00000441580 ARIH1Q9Y4X5 557 aaPredicted RBP13.31□□□□□ -0.28
CPSF4-206ENST00000441580 DENND4CQ5VZ89 1909 aa13.31□□□□□ -0.28
CPSF4-206ENST00000441580 A0A096LPK6 155 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 TRAV19A0A0A6YYK7 116 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 H0YHG0 523 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 SLC7A4O43246 635 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 TGM5O43548 720 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 LUC7L3O95232 432 aaKnown RBP13.3□□□□□ -0.28
CPSF4-206ENST00000441580 VAPBO95292 243 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 NDST3O95803 873 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 FGBP02675 491 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 SERPINE1P05121 402 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 C8AP07357 584 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 CNPP09543 421 aaKnown RBP13.3□□□□□ -0.28
CPSF4-206ENST00000441580 LINC00271P0C7V0 271 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 COL6A2P12110 1019 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 HOXB8P17481 243 aaPredicted RBP13.3□□□□□ -0.28
CPSF4-206ENST00000441580 GRK2P25098 689 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 ARNTP27540 789 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 SLC1A2P43004 574 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 SCTRP47872 440 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 SLC7A9P82251 487 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 CHI3L2Q15782 390 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 TSNAXIP1Q2TAA8 658 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 SIRPB2Q5JXA9 342 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 CXorf57Q6NSI4 855 aaKnown RBP13.3□□□□□ -0.28
CPSF4-206ENST00000441580 TMC8Q8IU68 726 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 CPXM2Q8N436 756 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 DCAF4L2Q8NA75 395 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 SCG3Q8WXD2 468 aaKnown RBP13.3□□□□□ -0.28
CPSF4-206ENST00000441580 RMDN2Q96LZ7 410 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 ZBED2Q9BTP6 218 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 MUC3BQ9H195 1237 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 MTIF3Q9H2K0 278 aaKnown RBP13.3□□□□□ -0.28
CPSF4-206ENST00000441580 MFSD1Q9H3U5 465 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 NPHS2Q9NP85 383 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 TXLNGQ9NUQ3 528 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 EMCNQ9ULC0 261 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 CORO1CQ9ULV4 474 aaPredicted RBP13.3□□□□□ -0.28
CPSF4-206ENST00000441580 IRAK3Q9Y616 596 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 CPQQ9Y646 472 aa13.3□□□□□ -0.28
CPSF4-206ENST00000441580 A0A087X1B8 175 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 A0A0D9SEW6 157 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 CCDC195A0A1B0GUA6 201 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 FAM95CA0A1B0GW59 222 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 CFAP73A6NFT4 308 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 MROH6A6NGR9 719 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 GFRA2O00451 464 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 SNNO75324 88 aaPredicted RBP13.29□□□□□ -0.28
CPSF4-206ENST00000441580 UBOX5O94941 541 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 GLUD1P00367 558 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 C1RP00736 705 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 DDX6P26196 483 aaKnown RBP eCLIP13.29□□□□□ -0.28
CPSF4-206ENST00000441580 GABRR2P28476 465 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 CRABP2P29373 138 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 LIG3P49916 1009 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 CSRP3P50461 194 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 PRKAA2P54646 552 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 OCRLQ01968 901 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 ACVR1Q04771 509 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 BST1Q10588 318 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 SLC12A1Q13621 1099 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 CDH18Q13634 790 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 GRM3Q14832 879 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 PCLAFQ15004 111 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 SMAD1Q15797 465 aaKnown RBP13.29□□□□□ -0.28
CPSF4-206ENST00000441580 FASTKD1Q53R41 847 aaKnown RBP13.29□□□□□ -0.28
CPSF4-206ENST00000441580 MBLAC2Q68D91 279 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 NEPROQ6NW34 567 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 ESRP1Q6NXG1 681 aaKnown RBP13.29□□□□□ -0.28
CPSF4-206ENST00000441580 CMC1Q7Z7K0 106 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms