RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 NOP2P46087 812 aaKnown RBP10.61□□□□□ -0.71
MCF2L-216ENST00000439475 CSNK1DP48730 415 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 CCT8P50990 548 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 TAS2R38P59533 333 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 PPP2CBP62714 309 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 POLR2LP62875 67 aaKnown RBP10.61□□□□□ -0.71
MCF2L-216ENST00000439475 PPP2CAP67775 309 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 SLC25A11Q02978 314 aaKnown RBP10.61□□□□□ -0.71
MCF2L-216ENST00000439475 ELP6Q0PNE2 266 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 SGCGQ13326 291 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 INAVAQ3KP66 663 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 ATXN7L2Q5T6C5 722 aaPredicted RBP10.61□□□□□ -0.71
MCF2L-216ENST00000439475 AFMIDQ63HM1 303 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 PSAPL1Q6NUJ1 521 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 ARHGAP12Q8IWW6 846 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 TC2NQ8N9U0 490 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 DEFB124Q8NES8 71 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 SETD7Q8WTS6 366 aaKnown RBP10.61□□□□□ -0.71
MCF2L-216ENST00000439475 RFFLQ8WZ73 363 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 KLHDC7BQ96G42 594 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 ZNF641Q96N77 438 aaPredicted RBP10.61□□□□□ -0.71
MCF2L-216ENST00000439475 TUBGCP5Q96RT8 1024 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 ORAI3Q9BRQ5 295 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 CALN1Q9BXU9 219 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 MAK16Q9BXY0 300 aaKnown RBP10.61□□□□□ -0.71
MCF2L-216ENST00000439475 SLC17A9Q9BYT1 436 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 KLC2Q9H0B6 622 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 SUV39H2Q9H5I1 410 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 EBF2Q9HAK2 575 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 PDFQ9HBH1 243 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 DKK3Q9UBP4 350 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 FADS3Q9Y5Q0 445 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 HS3ST3A1Q9Y663 406 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 TRPM6Q9BX84 2022 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 ASCC3Q8N3C0 2202 aaKnown RBP10.6□□□□□ -0.71
MCF2L-216ENST00000439475 PCDH15Q96QU1 1955 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 A0A1W2PQ67 120 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 A0A1W2PR77 199 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 GOLGA6L6A8MZA4 724 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 C10orf142B7Z368 130 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 FLRT2O43155 660 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 GJB3O75712 270 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 PAK4O96013 591 aaPredicted RBP10.6□□□□□ -0.71
MCF2L-216ENST00000439475 ADRB1P08588 477 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 CD59P13987 128 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 TCF4P15884 667 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 MX2P20592 715 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 SERPINA4P29622 427 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 GKP32189 559 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 HSPA9P38646 679 aaKnown RBP10.6□□□□□ -0.71
MCF2L-216ENST00000439475 CTSKP43235 329 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 ARRB1P49407 418 aaPredicted RBP10.6□□□□□ -0.71
MCF2L-216ENST00000439475 BCL2L1Q07817 233 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 ZNF235Q14590 738 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 LBRQ14739 615 aaKnown RBP10.6□□□□□ -0.71
MCF2L-216ENST00000439475 ZNF423Q2M1K9 1284 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 N4BP2L1Q5TBK1 243 aaPredicted RBP10.6□□□□□ -0.71
MCF2L-216ENST00000439475 TXNRD3NBQ6F5E7 133 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 TIGD7Q6NT04 549 aaPredicted RBP10.6□□□□□ -0.71
MCF2L-216ENST00000439475 PARS2Q7L3T8 475 aaKnown RBP10.6□□□□□ -0.71
MCF2L-216ENST00000439475 SRLQ86TD4 932 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 TMTC1Q8IUR5 882 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 ATPAF2Q8N5M1 289 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 OR2I1PQ8NGU4 316 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 FAM71BQ8TC56 605 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.6□□□□□ -0.71
MCF2L-216ENST00000439475 CXorf40AQ8TE69 158 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 RHBDD1Q8TEB9 315 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 ASB12Q8WXK4 309 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 KLK6Q92876 244 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 ELF4Q99607 663 aaPredicted RBP10.6□□□□□ -0.71
MCF2L-216ENST00000439475 ZNF670Q9BS34 389 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 C1QTNF7Q9BXJ2 289 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 ATP13A3Q9H7F0 1226 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 ERVMER34-1Q9H9K5 563 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 LHX3Q9UBR4 397 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 USP34Q70CQ2 3546 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 PCNX2A6NKB5 2137 aa10.6□□□□□ -0.71
MCF2L-216ENST00000439475 CACNA1EQ15878 2313 aa10.59□□□□□ -0.71
MCF2L-216ENST00000439475 A0A1B0GTQ1 180 aa10.59□□□□□ -0.71
MCF2L-216ENST00000439475 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.59□□□□□ -0.71
MCF2L-216ENST00000439475 MED19A0JLT2 244 aaPredicted RBP10.59□□□□□ -0.71
MCF2L-216ENST00000439475 SH3BP5O60239 455 aa10.59□□□□□ -0.71
MCF2L-216ENST00000439475 NEBLO76041 1014 aa10.59□□□□□ -0.71
MCF2L-216ENST00000439475 TM7SF2O76062 418 aa10.59□□□□□ -0.71
MCF2L-216ENST00000439475 MTA2O94776 668 aa10.59□□□□□ -0.71
MCF2L-216ENST00000439475 ITGAVP06756 1048 aa10.59□□□□□ -0.71
MCF2L-216ENST00000439475 KDELR1P24390 212 aa10.59□□□□□ -0.71
MCF2L-216ENST00000439475 SCNN1BP51168 640 aa10.59□□□□□ -0.71
MCF2L-216ENST00000439475 BNC1Q01954 994 aa10.59□□□□□ -0.71
MCF2L-216ENST00000439475 PAFAH1B3Q15102 231 aaKnown RBP10.59□□□□□ -0.71
MCF2L-216ENST00000439475 TCEAL1Q15170 157 aa10.59□□□□□ -0.71
MCF2L-216ENST00000439475 ZNF284Q2VY69 593 aa10.59□□□□□ -0.71
MCF2L-216ENST00000439475 ATP13A4Q4VNC1 1196 aa10.59□□□□□ -0.71
MCF2L-216ENST00000439475 MARC1Q5VT66 337 aa10.59□□□□□ -0.71
MCF2L-216ENST00000439475 ERAP2Q6P179 960 aa10.59□□□□□ -0.71
MCF2L-216ENST00000439475 BRAT1Q6PJG6 821 aa10.59□□□□□ -0.71
MCF2L-216ENST00000439475 PIP4P1Q86T03 277 aa10.59□□□□□ -0.71
MCF2L-216ENST00000439475 DCP2Q8IU60 420 aaKnown RBP10.59□□□□□ -0.71
MCF2L-216ENST00000439475 NAXDQ8IW45 347 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms