RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 NCK1P16333 377 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 CDH2P19022 906 aaPredicted RBP10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 NFKB1P19838 968 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 MTTPP55157 894 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 FPGSQ05932 587 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 SNX17Q15036 470 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 PLA2G4EQ3MJ16 856 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 NCBP2-AS2Q69YL0 99 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 CLEC6AQ6EIG7 209 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 BRI3BPQ8WY22 251 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 VPS50Q96JG6 964 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 SIGLEC10Q96LC7 697 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 ABHD16BQ9H3Z7 469 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 SPON1Q9HCB6 807 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 FBRSL1Q9HCM7 1045 aaKnown RBP10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 ITM2CQ9NQX7 267 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 CNTN3Q9P232 1028 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 EMCNQ9ULC0 261 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 VANGL2Q9ULK5 521 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 DMTF1Q9Y222 760 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 TRIM17Q9Y577 477 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 PTGES3LE9PB15 166 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 K7EPI3 171 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 CD4P01730 458 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 ZFXP17010 805 aaPredicted RBP10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 GRIK1P39086 918 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 CLCNKBP51801 687 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 C21orf59P57076 290 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 MAXP61244 160 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 RPS6KA2Q15349 733 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 PGS1Q32NB8 556 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 DCAF4L1Q3SXM0 396 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 RNF19BQ6ZMZ0 732 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 LDB1Q86U70 411 aaPredicted RBP10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 FAM35AQ86V20 835 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 MIB1Q86YT6 1006 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 HERC6Q8IVU3 1022 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 APLFQ8IW19 511 aaPredicted RBP10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 CBR4Q8N4T8 237 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 MAGEE2Q8TD90 523 aaPredicted RBP10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 SREK1Q8WXA9 508 aaKnown RBP10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 LPGAT1Q92604 370 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 HDAC11Q96DB2 347 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 CCDC97Q96F63 343 aaPredicted RBP10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 MAML3Q96JK9 1138 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 ILKAPQ9H0C8 392 aaPredicted RBP10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 TBC1D23Q9NUY8 699 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 MPP6Q9NZW5 540 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 RPL26L1Q9UNX3 145 aaKnown RBP10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 AP4S1Q9Y587 144 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 PTGDR2Q9Y5Y4 395 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 QSER1Q2KHR3 1735 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 NR5A2O00482 541 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 NRP2O60462 931 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 GLRA3O75311 464 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 IMPDH2P12268 514 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 DARSP14868 501 aaKnown RBP10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 CD247P20963 164 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 DPP6P42658 865 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 MATKP42679 507 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 HUNKP57058 714 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 SPIDRQ14159 915 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 ADGRE1Q14246 886 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 CYP2A13Q16696 494 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 SV2CQ496J9 727 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 NOMO2Q5JPE7 1267 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 POTEHQ6S545 545 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 ZNF410Q86VK4 478 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 TMCO5AQ8N6Q1 288 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 SCAMP5Q8TAC9 235 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 HBEGFQ99075 208 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 ZNF670Q9BS34 389 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 FSD1LQ9BXM9 530 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 ABI2Q9NYB9 513 aaPredicted RBP10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 OR12D3Q9UGF7 316 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 EFR3BQ9Y2G0 817 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 E7ENX8 843 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 NDUFB5O43674 189 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 SPAG6O75602 509 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 NPR3P17342 541 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 UGT1A1P22309 533 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 UGT1A4P22310 534 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 UGT1A3P35503 534 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 UGT1A5P35504 534 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 THPOP40225 353 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 NR1H2P55055 460 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 NR1D2Q14995 579 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 ARL13BQ3SXY8 428 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 DUSP28Q4G0W2 176 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 MARCH8Q5T0T0 291 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 GALNT18Q6P9A2 607 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 CYP4V2Q6ZWL3 525 aaPredicted RBP10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 PDZD4Q76G19 769 aaPredicted RBP10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 TMEM110Q86TL2 294 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 NT5DC4Q86YG4 428 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 SPPL2CQ8IUH8 684 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 RELL1Q8IUW5 271 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 SLC41A1Q8IVJ1 513 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 Q8N9G6 341 aaPredicted RBP10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 BHMTQ93088 406 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms