RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 SLC25A52Q3SY17 297 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 CCNI2Q6ZMN8 369 aaPredicted RBP12.2□□□□□ -0.46
NEK1-201ENST00000439128 CASKIN2Q8WXE0 1202 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 CNDP1Q96KN2 507 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 MFSD14AQ96MC6 490 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 KXD1Q9BQD3 176 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 PRDM12Q9H4Q4 367 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 POMKQ9H5K3 350 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 A0A096LPK6 155 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 RASSF10A6NK89 507 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 E9PBE3 544 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 ERBB2P04626 1255 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 CDH4P55283 916 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 GJA9P57773 515 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 C1QTNF8P60827 252 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 CCINQ13939 588 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 DPYSL3Q14195 570 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 PARP15Q460N3 678 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 PHF19Q5T6S3 580 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 RNF44Q7L0R7 432 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 NACC2Q96BF6 587 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 EXOSC4Q9NPD3 245 aaKnown RBP12.2□□□□□ -0.46
NEK1-201ENST00000439128 CACNG4Q9UBN1 327 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 PRKAB1Q9Y478 270 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 A0A087X1B8 175 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 GLI1P08151 1106 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 CPA2P48052 419 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 CRADDP78560 199 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 ZDHHC20Q5W0Z9 365 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 ZNF544Q6NX49 715 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 IYDQ6PHW0 289 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 MCEMP1Q8IX19 187 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 HEXDCQ8WVB3 486 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 PHACTR1Q9C0D0 580 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 DHX33Q9H6R0 707 aaKnown RBP12.2□□□□□ -0.46
NEK1-201ENST00000439128 PCDHA11Q9Y5I1 949 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 MYO5BQ9ULV0 1848 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 TPST1O60507 370 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 GATMP50440 423 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 N4BP2L1Q5TBK1 243 aaPredicted RBP12.2□□□□□ -0.46
NEK1-201ENST00000439128 NKAPQ8N5F7 415 aaKnown RBP12.2□□□□□ -0.46
NEK1-201ENST00000439128 IRF7Q92985 503 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 EME1Q96AY2 570 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 DNAJC19Q96DA6 116 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 SH3GL1Q99961 368 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 ALG9Q9H6U8 611 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 PARP4Q9UKK3 1724 aaKnown RBP12.2□□□□□ -0.46
NEK1-201ENST00000439128 POP4O95707 220 aaKnown RBP12.2□□□□□ -0.46
NEK1-201ENST00000439128 CCDC159P0C7I6 412 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 JAK1P23458 1154 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 LRRC23Q53EV4 343 aaPredicted RBP12.2□□□□□ -0.46
NEK1-201ENST00000439128 FNBP1LQ5T0N5 605 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 SLC51AQ86UW1 340 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 SLC41A1Q8IVJ1 513 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 CA14Q9ULX7 337 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 SLC12A4Q9UP95 1085 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 ANKRD6Q9Y2G4 727 aa12.2□□□□□ -0.46
NEK1-201ENST00000439128 GLYATL1P3A0A0U1RQE8 302 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 MYBPHLA2RUH7 354 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 EIF3HO15372 352 aaKnown RBP eCLIP12.19□□□□□ -0.46
NEK1-201ENST00000439128 PHGDHO43175 533 aaKnown RBP12.19□□□□□ -0.46
NEK1-201ENST00000439128 HIST1H2ABP04908 130 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 MLLT1Q03111 559 aaPredicted RBP12.19□□□□□ -0.46
NEK1-201ENST00000439128 TEAD2Q15562 447 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 ZNF792Q3KQV3 632 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 CDKAL1Q5VV42 579 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 FAM45BPQ6NSW5 357 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 SLC39A5Q6ZMH5 540 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 HIST3H2AQ7L7L0 130 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 CHST15Q7LFX5 561 aaPredicted RBP12.19□□□□□ -0.46
NEK1-201ENST00000439128 GPR156Q8NFN8 814 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 FAM45AQ8TCE6 357 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 HIST1H2ACQ93077 130 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 DTNBP1Q96EV8 351 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 ADI1Q9BV57 179 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 STOML1Q9UBI4 398 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 SOX13Q9UN79 622 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 TNPO3Q9Y5L0 923 aaKnown RBP12.19□□□□□ -0.46
NEK1-201ENST00000439128 A0A1B0GVM2 712 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 TCAF2A6NFQ2 919 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 SNTNA6NMZ2 147 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 PTPN9P43378 593 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 SRSF11Q05519 484 aaKnown RBP12.19□□□□□ -0.46
NEK1-201ENST00000439128 CYTH1Q15438 398 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 ANO7Q6IWH7 933 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 CHRDL2Q6WN34 429 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 PAGE2Q7Z2X7 111 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 WFIKKN2Q8TEU8 576 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 TAS2R14Q9NYV8 317 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 SNX6Q9UNH7 406 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 B2RBV5 119 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 VPS4BO75351 444 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 ERAL1O75616 437 aaKnown RBP12.19□□□□□ -0.46
NEK1-201ENST00000439128 HOXB8P17481 243 aaPredicted RBP12.19□□□□□ -0.46
NEK1-201ENST00000439128 MINDY4Q4G0A6 757 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 DEPDC1Q5TB30 811 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 AGBL2Q5U5Z8 902 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 ZNF621Q6ZSS3 439 aa12.19□□□□□ -0.46
NEK1-201ENST00000439128 ZNF784Q8NCA9 323 aaPredicted RBP12.19□□□□□ -0.46
NEK1-201ENST00000439128 BPIFB1Q8TDL5 484 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms