RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 TTC30AQ86WT1 665 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 ADGRF3Q8IZF5 1079 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 GLIS1Q8NBF1 620 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 CLEC18CQ8NCF0 446 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 ADPRHL1Q8NDY3 354 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 SLC22A17Q8WUG5 538 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 TIFAQ96CG3 184 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 FAR2Q96K12 515 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 SLITRK1Q96PX8 696 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 PAAF1Q9BRP4 392 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 COLEC11Q9BWP8 271 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 TM6SF1Q9BZW5 370 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 RMI1Q9H9A7 625 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 IL21RQ9HBE5 538 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 RGL1Q9NZL6 768 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 MAN2B2Q9Y2E5 1009 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 BOD1L1Q8NFC6 3051 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 USP47Q96K76 1375 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 IFT172Q9UG01 1749 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 F8P00451 2351 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 USP9YO00507 2555 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 BRWD1Q9NSI6 2320 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 CHD7Q9P2D1 2997 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 CXorf65A6NEN9 183 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 APOL1O14791 398 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 MSI1O43347 362 aaKnown RBP3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 RGS14O43566 566 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 SPRY3O43610 288 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 NEURL1O76050 574 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 ITGA5P08648 1049 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 HOXD3P31249 432 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 STT3AP46977 705 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 VCPP55072 806 aaKnown RBP3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 SP3Q02447 781 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 GPS2Q13227 327 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 GPR18Q14330 331 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 GALNT3Q14435 633 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 SHBQ15464 509 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 IZUMO4Q1ZYL8 232 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 ALG10Q5BKT4 473 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 ALG10BQ5I7T1 473 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 ENTPD8Q5MY95 495 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 GSG1LQ6UXU4 331 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 FAM83HQ6ZRV2 1179 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 RASGRP3Q8IV61 690 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 CADM3Q8N126 398 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 GABPB2Q8TAK5 448 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 WFIKKN2Q8TEU8 576 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 HERVK_113Q902F9 699 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 TSR2Q969E8 191 aaKnown RBP3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 TTC17Q96AE7 1141 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 ZNF419Q96HQ0 510 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 EIF2AQ9BY44 585 aaKnown RBP3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 CDT1Q9H211 546 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 MAGEH1Q9H213 219 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 SFXN1Q9H9B4 322 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 TXNRD2Q9NNW7 524 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 FSCN3Q9NQT6 498 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 PLSCR4Q9NRQ2 329 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 G3BP2Q9UN86 482 aaKnown RBP3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 TNFSF13BQ9Y275 285 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 PCDHGB1Q9Y5G3 927 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 GPRASP1Q5JY77 1395 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 BCORQ6W2J9 1755 aa3.2□□□□□ -1.9
HMGB1P18-201ENST00000438801 SNED1Q8TER0 1413 aa3.19□□□□□ -1.9
HMGB1P18-201ENST00000438801 PNMA6EA0A0J9YXQ4 647 aa3.19□□□□□ -1.9
HMGB1P18-201ENST00000438801 NKX2-8O15522 239 aa3.19□□□□□ -1.9
HMGB1P18-201ENST00000438801 TAF5LO75529 589 aa3.19□□□□□ -1.9
HMGB1P18-201ENST00000438801 GAS8-AS1O95177 125 aa3.19□□□□□ -1.9
HMGB1P18-201ENST00000438801 LCATP04180 440 aa3.19□□□□□ -1.9
HMGB1P18-201ENST00000438801 LCKP06239 509 aa3.19□□□□□ -1.9
HMGB1P18-201ENST00000438801 ALDOCP09972 364 aaKnown RBP3.19□□□□□ -1.9
HMGB1P18-201ENST00000438801 PKMP14618 531 aaKnown RBP3.19□□□□□ -1.9
HMGB1P18-201ENST00000438801 IGFBP2P18065 325 aa3.19□□□□□ -1.9
HMGB1P18-201ENST00000438801 ART1P52961 327 aa3.19□□□□□ -1.9
HMGB1P18-201ENST00000438801 ABATP80404 500 aa3.19□□□□□ -1.9
HMGB1P18-201ENST00000438801 TRAF1Q13077 416 aa3.19□□□□□ -1.9
HMGB1P18-201ENST00000438801 C10orf76Q5T2E6 689 aa3.19□□□□□ -1.9
HMGB1P18-201ENST00000438801 OTUD1Q5VV17 481 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P18-201ENST00000438801 C19orf48Q6RUI8 117 aa3.19□□□□□ -1.9
HMGB1P18-201ENST00000438801 TXLNBQ8N3L3 684 aa3.19□□□□□ -1.9
HMGB1P18-201ENST00000438801 ENGASEQ8NFI3 743 aa3.19□□□□□ -1.9
HMGB1P18-201ENST00000438801 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P18-201ENST00000438801 OSBPL5Q9H0X9 879 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P18-201ENST00000438801 FZD10Q9ULW2 581 aa3.19□□□□□ -1.9
HMGB1P18-201ENST00000438801 ICAM5Q9UMF0 924 aa3.19□□□□□ -1.9
HMGB1P18-201ENST00000438801 RAB3GAP2Q9H2M9 1393 aa3.19□□□□□ -1.9
HMGB1P18-201ENST00000438801 DOT1LQ8TEK3 1739 aa3.19□□□□□ -1.9
HMGB1P18-201ENST00000438801 PDZD2O15018 2839 aa3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 COL6A5A8TX70 2615 aa3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 ANKHD1Q8IWZ3 2542 aaKnown RBP3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 KIF24Q5T7B8 1368 aa3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 A0A087WYN8 130 aa3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 FAM234BA2RU67 622 aa3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 TMEM221A6NGB7 291 aa3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 M0R296 226 aa3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 ZNF432O94892 652 aa3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 ALDOAP04075 364 aaKnown RBP3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 RFX5P48382 616 aaPredicted RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms