RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 SLC35F6Q8N357 371 aa16.36■□□□□ 0.21
SNRPB-202ENST00000438552 ACTL9Q8TC94 416 aa16.36■□□□□ 0.21
SNRPB-202ENST00000438552 NKD2Q969F2 451 aaPredicted RBP16.36■□□□□ 0.21
SNRPB-202ENST00000438552 PPP1R16AQ96I34 528 aa16.36■□□□□ 0.21
SNRPB-202ENST00000438552 NSMCE3Q96MG7 304 aa16.36■□□□□ 0.21
SNRPB-202ENST00000438552 KLHL32Q96NJ5 620 aa16.36■□□□□ 0.21
SNRPB-202ENST00000438552 QKIQ96PU8 341 aaKnown RBP eCLIP16.36■□□□□ 0.21
SNRPB-202ENST00000438552 BTBD1Q9H0C5 482 aa16.36■□□□□ 0.21
SNRPB-202ENST00000438552 DYRK4Q9NR20 520 aa16.36■□□□□ 0.21
SNRPB-202ENST00000438552 RAB23Q9ULC3 237 aa16.36■□□□□ 0.21
SNRPB-202ENST00000438552 PROB1E7EW31 1015 aa16.35■□□□□ 0.21
SNRPB-202ENST00000438552 ENC1O14682 589 aa16.35■□□□□ 0.21
SNRPB-202ENST00000438552 KIF5CO60282 957 aa16.35■□□□□ 0.21
SNRPB-202ENST00000438552 NEBLO76041 1014 aa16.35■□□□□ 0.21
SNRPB-202ENST00000438552 TJP3O95049 919 aa16.35■□□□□ 0.21
SNRPB-202ENST00000438552 SEMA4FO95754 770 aa16.35■□□□□ 0.21
SNRPB-202ENST00000438552 HSPA9P38646 679 aaKnown RBP16.35■□□□□ 0.21
SNRPB-202ENST00000438552 CSNK1DP48730 415 aa16.35■□□□□ 0.21
SNRPB-202ENST00000438552 SCNN1BP51168 640 aa16.35■□□□□ 0.21
SNRPB-202ENST00000438552 AP1S1P61966 158 aa16.35■□□□□ 0.21
SNRPB-202ENST00000438552 IFI35P80217 286 aaPredicted RBP16.35■□□□□ 0.21
SNRPB-202ENST00000438552 SFSWAPQ12872 951 aaKnown RBP16.35■□□□□ 0.21
SNRPB-202ENST00000438552 KLF1Q13351 362 aaPredicted RBP16.35■□□□□ 0.21
SNRPB-202ENST00000438552 ZNF805Q5CZA5 627 aa16.35■□□□□ 0.21
SNRPB-202ENST00000438552 PIP5KL1Q5T9C9 394 aa16.35■□□□□ 0.21
SNRPB-202ENST00000438552 BZW1Q7L1Q6 419 aaKnown RBP16.35■□□□□ 0.21
SNRPB-202ENST00000438552 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.35■□□□□ 0.213e-6■■■■□ 21.7
SNRPB-202ENST00000438552 TFB1MQ8WVM0 346 aaKnown RBP16.35■□□□□ 0.21
SNRPB-202ENST00000438552 FAM131CQ96AQ9 280 aa16.35■□□□□ 0.21
SNRPB-202ENST00000438552 LRIG1Q96JA1 1093 aa16.35■□□□□ 0.21
SNRPB-202ENST00000438552 ZC3H10Q96K80 434 aaKnown RBP16.35■□□□□ 0.21
SNRPB-202ENST00000438552 HSPA12BQ96MM6 686 aa16.35■□□□□ 0.21
SNRPB-202ENST00000438552 OSBPL1AQ9BXW6 950 aa16.35■□□□□ 0.21
SNRPB-202ENST00000438552 CARD9Q9H257 536 aa16.35■□□□□ 0.21
SNRPB-202ENST00000438552 C10orf88Q9H8K7 445 aa16.35■□□□□ 0.21
SNRPB-202ENST00000438552 SCUBE2Q9NQ36 999 aa16.35■□□□□ 0.21
SNRPB-202ENST00000438552 RBM22Q9NW64 420 aaKnown RBP eCLIP16.35■□□□□ 0.212e-11■□□□□ 8.1
SNRPB-202ENST00000438552 GOLGA6L9A6NEM1 432 aa16.34■□□□□ 0.21
SNRPB-202ENST00000438552 PRR23AA6NEV1 266 aa16.34■□□□□ 0.21
SNRPB-202ENST00000438552 FAM47DPA6NHR8 397 aa16.34■□□□□ 0.21
SNRPB-202ENST00000438552 H7C0C1 242 aa16.34■□□□□ 0.21
SNRPB-202ENST00000438552 RHOBTB1O94844 696 aa16.34■□□□□ 0.21
SNRPB-202ENST00000438552 JCHAINP01591 159 aa16.34■□□□□ 0.21
SNRPB-202ENST00000438552 LMNAP02545 664 aaKnown RBP16.34■□□□□ 0.21
SNRPB-202ENST00000438552 CR2P20023 1033 aa16.34■□□□□ 0.21
SNRPB-202ENST00000438552 CXCR5P32302 372 aa16.34■□□□□ 0.21
SNRPB-202ENST00000438552 PTGER3P43115 390 aa16.34■□□□□ 0.21
SNRPB-202ENST00000438552 ATP5OP48047 213 aa16.34■□□□□ 0.21
SNRPB-202ENST00000438552 DHPSP49366 369 aaPredicted RBP16.34■□□□□ 0.21
SNRPB-202ENST00000438552 NEK3P51956 506 aa16.34■□□□□ 0.21
SNRPB-202ENST00000438552 DSC2Q02487 901 aa16.34■□□□□ 0.21
SNRPB-202ENST00000438552 ZNF33AQ06730 810 aa16.34■□□□□ 0.21
SNRPB-202ENST00000438552 ITKQ08881 620 aa16.34■□□□□ 0.21
SNRPB-202ENST00000438552 NSUN2Q08J23 767 aaKnown RBP eCLIP16.34■□□□□ 0.21
SNRPB-202ENST00000438552 LRRC73Q5JTD7 316 aa16.34■□□□□ 0.21
SNRPB-202ENST00000438552 NCEH1Q6PIU2 408 aa16.34■□□□□ 0.21
SNRPB-202ENST00000438552 ERN2Q76MJ5 926 aaKnown RBP16.34■□□□□ 0.21
SNRPB-202ENST00000438552 ADAT2Q7Z6V5 191 aaKnown RBP16.34■□□□□ 0.21
SNRPB-202ENST00000438552 CAMK1DQ8IU85 385 aa16.34■□□□□ 0.21
SNRPB-202ENST00000438552 SLC41A1Q8IVJ1 513 aa16.34■□□□□ 0.21
SNRPB-202ENST00000438552 C17orf53Q8N3J3 647 aaPredicted RBP16.34■□□□□ 0.21
SNRPB-202ENST00000438552 OR14C36Q8NHC7 312 aa16.34■□□□□ 0.21
SNRPB-202ENST00000438552 UBE2Q2Q8WVN8 375 aa16.34■□□□□ 0.21
SNRPB-202ENST00000438552 NUDCD1Q96RS6 583 aa16.34■□□□□ 0.21
SNRPB-202ENST00000438552 TUBGCP5Q96RT8 1024 aa16.34■□□□□ 0.21
SNRPB-202ENST00000438552 IL12RB2Q99665 862 aa16.34■□□□□ 0.21
SNRPB-202ENST00000438552 HDAC8Q9BY41 377 aa16.34■□□□□ 0.21
SNRPB-202ENST00000438552 CPEB1Q9BZB8 566 aaKnown RBP16.34■□□□□ 0.21
SNRPB-202ENST00000438552 POLR1EQ9GZS1 481 aaKnown RBP16.34■□□□□ 0.21
SNRPB-202ENST00000438552 BRD8Q9H0E9 1235 aa16.34■□□□□ 0.21
SNRPB-202ENST00000438552 SEMA4AQ9H3S1 761 aa16.34■□□□□ 0.21
SNRPB-202ENST00000438552 C6orf106Q9H6K1 298 aaPredicted RBP16.34■□□□□ 0.21
SNRPB-202ENST00000438552 ATP13A3Q9H7F0 1226 aa16.34■□□□□ 0.21
SNRPB-202ENST00000438552 SGK2Q9HBY8 427 aa16.34■□□□□ 0.21
SNRPB-202ENST00000438552 NOD2Q9HC29 1040 aa16.34■□□□□ 0.21
SNRPB-202ENST00000438552 R3HDM2Q9Y2K5 976 aaKnown RBP16.34■□□□□ 0.21
SNRPB-202ENST00000438552 ATXN2Q99700 1313 aaKnown RBP16.34■□□□□ 0.21
SNRPB-202ENST00000438552 RALGAPA1Q6GYQ0 2036 aa16.33■□□□□ 0.21
SNRPB-202ENST00000438552 C16orf96A6NNT2 1141 aa16.33■□□□□ 0.2
SNRPB-202ENST00000438552 SLC7A4O43246 635 aa16.33■□□□□ 0.2
SNRPB-202ENST00000438552 PLRG1O43660 514 aaKnown RBP16.33■□□□□ 0.2
SNRPB-202ENST00000438552 ATP1A1P05023 1023 aaKnown RBP16.33■□□□□ 0.2
SNRPB-202ENST00000438552 ADRB3P13945 408 aa16.33■□□□□ 0.2
SNRPB-202ENST00000438552 SERPINA4P29622 427 aa16.33■□□□□ 0.2
SNRPB-202ENST00000438552 DEKP35659 375 aaKnown RBP16.33■□□□□ 0.2
SNRPB-202ENST00000438552 ABL2P42684 1182 aa16.33■□□□□ 0.2
SNRPB-202ENST00000438552 MAPK8P45983 427 aa16.33■□□□□ 0.2
SNRPB-202ENST00000438552 TAS2R38P59533 333 aa16.33■□□□□ 0.2
SNRPB-202ENST00000438552 EIF3EP60228 445 aaKnown RBP16.33■□□□□ 0.2
SNRPB-202ENST00000438552 GRM3Q14832 879 aa16.33■□□□□ 0.2
SNRPB-202ENST00000438552 SLC45A4Q5BKX6 768 aa16.33■□□□□ 0.2
SNRPB-202ENST00000438552 LAIR1Q6GTX8 287 aa16.33■□□□□ 0.2
SNRPB-202ENST00000438552 ASCL5Q7RTU5 278 aa16.33■□□□□ 0.2
SNRPB-202ENST00000438552 ZSWIM9Q86XI8 627 aa16.33■□□□□ 0.2
SNRPB-202ENST00000438552 CNTD1Q8N815 330 aa16.33■□□□□ 0.2
SNRPB-202ENST00000438552 SEMA3CQ99985 751 aa16.33■□□□□ 0.2
SNRPB-202ENST00000438552 AMACRQ9UHK6 382 aa16.33■□□□□ 0.2
SNRPB-202ENST00000438552 ITM2BQ9Y287 266 aa16.33■□□□□ 0.2
SNRPB-202ENST00000438552 ATP8A1Q9Y2Q0 1164 aa16.33■□□□□ 0.2
SNRPB-202ENST00000438552 JRKLQ9Y4A0 524 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms