RNA–Protein interactions for RNA: ENST00000436769.5

COL6A2-206, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-206ENST00000436769 PFN3P60673 137 aa20.52■□□□□ 0.88
COL6A2-206ENST00000436769 SNRPD1P62314 119 aaKnown RBP20.52■□□□□ 0.88
COL6A2-206ENST00000436769 POLD3Q15054 466 aaPredicted RBP20.52■□□□□ 0.88
COL6A2-206ENST00000436769 SYCP1Q15431 976 aa20.52■□□□□ 0.88
COL6A2-206ENST00000436769 HS1BP3Q53T59 392 aa20.52■□□□□ 0.88
COL6A2-206ENST00000436769 KDM7AQ6ZMT4 941 aa20.52■□□□□ 0.88
COL6A2-206ENST00000436769 RYBPQ8N488 228 aaPredicted RBP20.52■□□□□ 0.88
COL6A2-206ENST00000436769 C3orf20Q8ND61 904 aa20.52■□□□□ 0.88
COL6A2-206ENST00000436769 SNIP1Q8TAD8 396 aaKnown RBP20.52■□□□□ 0.88
COL6A2-206ENST00000436769 LIMA1Q9UHB6 759 aaKnown RBP20.52■□□□□ 0.88
COL6A2-206ENST00000436769 HPCAL4Q9UM19 191 aa20.52■□□□□ 0.88
COL6A2-206ENST00000436769 CFAP46Q8IYW2 2715 aa20.52■□□□□ 0.87
COL6A2-206ENST00000436769 HELZ2Q9BYK8 2649 aaKnown RBP20.52■□□□□ 0.87
COL6A2-206ENST00000436769 LRRC10BA6NIK2 292 aa20.51■□□□□ 0.87
COL6A2-206ENST00000436769 OPA1O60313 960 aa20.51■□□□□ 0.87
COL6A2-206ENST00000436769 UGT2B4P06133 528 aa20.51■□□□□ 0.87
COL6A2-206ENST00000436769 ALPPL2P10696 532 aa20.51■□□□□ 0.87
COL6A2-206ENST00000436769 GPD1P21695 349 aa20.51■□□□□ 0.87
COL6A2-206ENST00000436769 SGCGQ13326 291 aa20.51■□□□□ 0.87
COL6A2-206ENST00000436769 ATXN7L2Q5T6C5 722 aaPredicted RBP20.51■□□□□ 0.87
COL6A2-206ENST00000436769 MON1BQ7L1V2 547 aa20.51■□□□□ 0.87
COL6A2-206ENST00000436769 SLFN11Q7Z7L1 901 aa20.51■□□□□ 0.87
COL6A2-206ENST00000436769 PARGQ86W56 976 aa20.51■□□□□ 0.87
COL6A2-206ENST00000436769 ZNF548Q8NEK5 533 aaPredicted RBP20.51■□□□□ 0.87
COL6A2-206ENST00000436769 CENPTQ96BT3 561 aa20.51■□□□□ 0.87
COL6A2-206ENST00000436769 KLHL32Q96NJ5 620 aa20.51■□□□□ 0.87
COL6A2-206ENST00000436769 SELENOOQ9BVL4 669 aa20.51■□□□□ 0.87
COL6A2-206ENST00000436769 KLC2Q9H0B6 622 aa20.51■□□□□ 0.87
COL6A2-206ENST00000436769 PCDHB1Q9Y5F3 818 aa20.51■□□□□ 0.87
COL6A2-206ENST00000436769 COL27A1Q8IZC6 1860 aaPredicted RBP20.51■□□□□ 0.87
COL6A2-206ENST00000436769 LRRK1Q38SD2 2015 aa20.51■□□□□ 0.87
COL6A2-206ENST00000436769 FPGTO14772 594 aa20.5■□□□□ 0.87
COL6A2-206ENST00000436769 CALB1P05937 261 aa20.5■□□□□ 0.87
COL6A2-206ENST00000436769 GP1BAP07359 652 aa20.5■□□□□ 0.87
COL6A2-206ENST00000436769 TPM2P07951 284 aa20.5■□□□□ 0.87
COL6A2-206ENST00000436769 EIF2B5Q13144 721 aaKnown RBP20.5■□□□□ 0.87
COL6A2-206ENST00000436769 PDE1CQ14123 709 aaPredicted RBP20.5■□□□□ 0.87
COL6A2-206ENST00000436769 GDPD4Q6W3E5 623 aa20.5■□□□□ 0.87
COL6A2-206ENST00000436769 APTXQ7Z2E3 356 aaKnown RBP20.5■□□□□ 0.87
COL6A2-206ENST00000436769 RTL3Q8N8U3 475 aaKnown RBP20.5■□□□□ 0.87
COL6A2-206ENST00000436769 NETO2Q8NC67 525 aa20.5■□□□□ 0.87
COL6A2-206ENST00000436769 DENND6BQ8NEG7 585 aa20.5■□□□□ 0.87
COL6A2-206ENST00000436769 BAP1Q92560 729 aa20.5■□□□□ 0.87
COL6A2-206ENST00000436769 FGF11Q92914 225 aa20.5■□□□□ 0.87
COL6A2-206ENST00000436769 DUSP23Q9BVJ7 150 aa20.5■□□□□ 0.87
COL6A2-206ENST00000436769 OSBPL1AQ9BXW6 950 aa20.5■□□□□ 0.87
COL6A2-206ENST00000436769 TTYH3Q9C0H2 523 aa20.5■□□□□ 0.87
COL6A2-206ENST00000436769 PRORYQ9H606 182 aa20.5■□□□□ 0.87
COL6A2-206ENST00000436769 CSNK1G3Q9Y6M4 447 aa20.5■□□□□ 0.87
COL6A2-206ENST00000436769 ZSCAN5CA6NGD5 496 aaPredicted RBP20.49■□□□□ 0.87
COL6A2-206ENST00000436769 LGALS16A8MUM7 142 aa20.49■□□□□ 0.87
COL6A2-206ENST00000436769 CCP110O43303 1012 aa20.49■□□□□ 0.87
COL6A2-206ENST00000436769 BUB1O43683 1085 aa20.49■□□□□ 0.87
COL6A2-206ENST00000436769 TMCC1O94876 653 aa20.49■□□□□ 0.87
COL6A2-206ENST00000436769 ZNF143P52747 638 aaPredicted RBP20.49■□□□□ 0.87
COL6A2-206ENST00000436769 RPL7AP62424 266 aaKnown RBP20.49■□□□□ 0.87
COL6A2-206ENST00000436769 INO80DQ53TQ3 878 aaPredicted RBP20.49■□□□□ 0.87
COL6A2-206ENST00000436769 PPP1R15BQ5SWA1 713 aa20.49■□□□□ 0.87
COL6A2-206ENST00000436769 NEK11Q8NG66 645 aa20.49■□□□□ 0.87
COL6A2-206ENST00000436769 HSD3B7Q9H2F3 369 aa20.49■□□□□ 0.87
COL6A2-206ENST00000436769 USP29Q9HBJ7 922 aa20.49■□□□□ 0.87
COL6A2-206ENST00000436769 PNMA8BQ9ULN7 279 aaPredicted RBP20.49■□□□□ 0.87
COL6A2-206ENST00000436769 FZD10Q9ULW2 581 aa20.49■□□□□ 0.87
COL6A2-206ENST00000436769 MFHAS1Q9Y4C4 1052 aa20.49■□□□□ 0.87
COL6A2-206ENST00000436769 RAI2Q9Y5P3 530 aa20.49■□□□□ 0.87
COL6A2-206ENST00000436769 WASH4PA8MWX3 477 aa20.48■□□□□ 0.87
COL6A2-206ENST00000436769 NEMP1O14524 444 aa20.48■□□□□ 0.87
COL6A2-206ENST00000436769 ITIH2P19823 946 aa20.48■□□□□ 0.87
COL6A2-206ENST00000436769 EPHB2P29323 1055 aa20.48■□□□□ 0.87
COL6A2-206ENST00000436769 C1QBPQ07021 282 aaKnown RBP20.48■□□□□ 0.87
COL6A2-206ENST00000436769 TBC1D25Q3MII6 688 aa20.48■□□□□ 0.87
COL6A2-206ENST00000436769 LRRC69Q6ZNQ3 347 aa20.48■□□□□ 0.87
COL6A2-206ENST00000436769 TTC7BQ86TV6 843 aa20.48■□□□□ 0.87
COL6A2-206ENST00000436769 CASKIN2Q8WXE0 1202 aa20.48■□□□□ 0.87
COL6A2-206ENST00000436769 ARHGEF26Q96DR7 871 aa20.48■□□□□ 0.87
COL6A2-206ENST00000436769 ERGIC2Q96RQ1 377 aa20.48■□□□□ 0.87
COL6A2-206ENST00000436769 AGPAT1Q99943 283 aa20.48■□□□□ 0.87
COL6A2-206ENST00000436769 IPO11Q9UI26 975 aaKnown RBP20.48■□□□□ 0.87
COL6A2-206ENST00000436769 H3BM21 787 aa20.47■□□□□ 0.87
COL6A2-206ENST00000436769 RRP8O43159 456 aaKnown RBP20.47■□□□□ 0.87
COL6A2-206ENST00000436769 AQP9O43315 295 aa20.47■□□□□ 0.87
COL6A2-206ENST00000436769 MMP20O60882 483 aa20.47■□□□□ 0.87
COL6A2-206ENST00000436769 TIMP2P16035 220 aa20.47■□□□□ 0.87
COL6A2-206ENST00000436769 JUNDP17535 347 aa20.47■□□□□ 0.87
COL6A2-206ENST00000436769 ACTN2P35609 894 aa20.47■□□□□ 0.87
COL6A2-206ENST00000436769 DUSP3P51452 185 aaPredicted RBP20.47■□□□□ 0.87
COL6A2-206ENST00000436769 YBEYP58557 167 aaPredicted RBP20.47■□□□□ 0.87
COL6A2-206ENST00000436769 LRRC73Q5JTD7 316 aa20.47■□□□□ 0.87
COL6A2-206ENST00000436769 ZCCHC8Q6NZY4 707 aaKnown RBP20.47■□□□□ 0.87
COL6A2-206ENST00000436769 SCYL2Q6P3W7 929 aa20.47■□□□□ 0.87
COL6A2-206ENST00000436769 UMODL1-AS1Q8N2C9 162 aa20.47■□□□□ 0.87
COL6A2-206ENST00000436769 HMCESQ96FZ2 354 aa20.47■□□□□ 0.87
COL6A2-206ENST00000436769 GDAP1L1Q96MZ0 367 aa20.47■□□□□ 0.87
COL6A2-206ENST00000436769 TCEAL2Q9H3H9 227 aaPredicted RBP20.47■□□□□ 0.87
COL6A2-206ENST00000436769 DKK3Q9UBP4 350 aa20.47■□□□□ 0.87
COL6A2-206ENST00000436769 SALL4Q9UJQ4 1053 aa20.47■□□□□ 0.87
COL6A2-206ENST00000436769 KIF26BQ2KJY2 2108 aa20.47■□□□□ 0.87
COL6A2-206ENST00000436769 RASA4BC9J798 803 aa20.46■□□□□ 0.87
COL6A2-206ENST00000436769 TPP1O14773 563 aa20.46■□□□□ 0.87
COL6A2-206ENST00000436769 INSIG1O15503 277 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms