RNA–Protein interactions for RNA: ENST00000436630.6

RPE-208, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 1,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-208ENST00000436630 WASH3PC4AMC7 463 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 K7ERQ8 282 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 EIF3HO15372 352 aaKnown RBP eCLIP13.58□□□□□ -0.24
RPE-208ENST00000436630 SMAD6O43541 496 aaKnown RBP13.58□□□□□ -0.24
RPE-208ENST00000436630 TMEM63AO94886 807 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 POP4O95707 220 aaKnown RBP13.58□□□□□ -0.24
RPE-208ENST00000436630 HLA-DPA1P20036 260 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 SERPINA4P29622 427 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 CARSP49589 748 aaKnown RBP13.58□□□□□ -0.24
RPE-208ENST00000436630 NUMBP49757 651 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 SCNN1BP51168 640 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 ARL4CP56559 192 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 WNT3AP56704 352 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 RPL26P61254 145 aaKnown RBP13.58□□□□□ -0.24
RPE-208ENST00000436630 MRPS21P82921 87 aaKnown RBP13.58□□□□□ -0.24
RPE-208ENST00000436630 SKOR1P84550 965 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 NIPAL4Q0D2K0 466 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 CBLBQ13191 982 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 ENPP2Q13822 863 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 ZNF234Q14588 700 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 HIF1AQ16665 826 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 HNRNPA1L2Q32P51 320 aaKnown RBP13.58□□□□□ -0.24
RPE-208ENST00000436630 DNAJC21Q5F1R6 531 aaKnown RBP13.58□□□□□ -0.24
RPE-208ENST00000436630 DGKKQ5KSL6 1271 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 EMBQ6PCB8 327 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 NCEH1Q6PIU2 408 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 TXNDC11Q6PKC3 985 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 KDELC1Q6UW63 502 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 ZDHHC24Q6UX98 284 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 ZNF852Q6ZMS4 543 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 DSG4Q86SJ6 1040 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 PRPF39Q86UA1 669 aaKnown RBP13.58□□□□□ -0.24
RPE-208ENST00000436630 PDIK1LQ8N165 341 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 PDCD7Q8N8D1 485 aaKnown RBP13.58□□□□□ -0.24
RPE-208ENST00000436630 IPMKQ8NFU5 416 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 SORCS1Q8WY21 1168 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 FAM3CQ92520 227 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 EXOC2Q96KP1 924 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 RBM15Q96T37 977 aaKnown RBP eCLIP13.58□□□□□ -0.24
RPE-208ENST00000436630 TBL1YQ9BQ87 522 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 GORASP1Q9BQQ3 440 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 OSBPL1AQ9BXW6 950 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 CPEB1Q9BZB8 566 aaKnown RBP13.58□□□□□ -0.24
RPE-208ENST00000436630 TM6SF2Q9BZW4 377 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 TMEM245Q9H330 911 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 FBRSQ9HAH7 460 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 NOD2Q9HC29 1040 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 SUN2Q9UH99 717 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 RPL26L1Q9UNX3 145 aaKnown RBP13.58□□□□□ -0.24
RPE-208ENST00000436630 ACTL7AQ9Y615 435 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 UNC80Q8N2C7 3258 aa13.58□□□□□ -0.24
RPE-208ENST00000436630 TP73O15350 636 aa13.57□□□□□ -0.24
RPE-208ENST00000436630 PMPCBO75439 489 aa13.57□□□□□ -0.24
RPE-208ENST00000436630 ZNF821O75541 412 aaPredicted RBP13.57□□□□□ -0.24
RPE-208ENST00000436630 MT-CYBP00156 380 aaPredicted RBP13.57□□□□□ -0.24
RPE-208ENST00000436630 FGF1P05230 155 aa13.57□□□□□ -0.24
RPE-208ENST00000436630 MMP2P08253 660 aa13.57□□□□□ -0.24
RPE-208ENST00000436630 BMP1P13497 986 aa13.57□□□□□ -0.24
RPE-208ENST00000436630 ECHS1P30084 290 aa13.57□□□□□ -0.24
RPE-208ENST00000436630 RGRP47804 291 aa13.57□□□□□ -0.24
RPE-208ENST00000436630 CCNHP51946 323 aaPredicted RBP13.57□□□□□ -0.24
RPE-208ENST00000436630 MESP2Q0VG99 397 aa13.57□□□□□ -0.24
RPE-208ENST00000436630 LRRC32Q14392 662 aa13.57□□□□□ -0.24
RPE-208ENST00000436630 ELAVL3Q14576 367 aaKnown RBP13.57□□□□□ -0.24
RPE-208ENST00000436630 PON2Q15165 354 aa13.57□□□□□ -0.24
RPE-208ENST00000436630 ANKRD22Q5VYY1 191 aa13.57□□□□□ -0.24
RPE-208ENST00000436630 NAIF1Q69YI7 327 aaPredicted RBP13.57□□□□□ -0.24
RPE-208ENST00000436630 FSTL4Q6MZW2 842 aa13.57□□□□□ -0.24
RPE-208ENST00000436630 LRRC8BQ6P9F7 803 aa13.57□□□□□ -0.24
RPE-208ENST00000436630 CCNI2Q6ZMN8 369 aaPredicted RBP13.57□□□□□ -0.24
RPE-208ENST00000436630 Q6ZVU0 165 aa13.57□□□□□ -0.24
RPE-208ENST00000436630 CENPUQ71F23 418 aa13.57□□□□□ -0.24
RPE-208ENST00000436630 TAB3Q8N5C8 712 aaPredicted RBP13.57□□□□□ -0.24
RPE-208ENST00000436630 ZNF513Q8N8E2 541 aaPredicted RBP13.57□□□□□ -0.24
RPE-208ENST00000436630 SPATA22Q8NHS9 363 aa13.57□□□□□ -0.24
RPE-208ENST00000436630 SPOCK2Q92563 424 aa13.57□□□□□ -0.24
RPE-208ENST00000436630 LRRC39Q96DD0 335 aa13.57□□□□□ -0.24
RPE-208ENST00000436630 IFT43Q96FT9 208 aa13.57□□□□□ -0.24
RPE-208ENST00000436630 ZNF641Q96N77 438 aaPredicted RBP13.57□□□□□ -0.24
RPE-208ENST00000436630 SERPINB12Q96P63 405 aa13.57□□□□□ -0.24
RPE-208ENST00000436630 TDRD1Q9BXT4 1180 aaKnown RBP13.57□□□□□ -0.24
RPE-208ENST00000436630 ADGRE3Q9BY15 652 aa13.57□□□□□ -0.24
RPE-208ENST00000436630 SLCO3A1Q9UIG8 710 aa13.57□□□□□ -0.24
RPE-208ENST00000436630 NFU1Q9UMS0 254 aa13.57□□□□□ -0.24
RPE-208ENST00000436630 TTC34A8MYJ7 566 aa13.56□□□□□ -0.24
RPE-208ENST00000436630 K7EQS6 105 aa13.56□□□□□ -0.24
RPE-208ENST00000436630 NDST3O95803 873 aa13.56□□□□□ -0.24
RPE-208ENST00000436630 PRNPP04156 253 aa13.56□□□□□ -0.24
RPE-208ENST00000436630 NFKBIAP25963 317 aa13.56□□□□□ -0.24
RPE-208ENST00000436630 ADRA1AP35348 466 aa13.56□□□□□ -0.24
RPE-208ENST00000436630 MAGEA3P43357 314 aa13.56□□□□□ -0.24
RPE-208ENST00000436630 KIR2DL1P43626 348 aaPredicted RBP13.56□□□□□ -0.24
RPE-208ENST00000436630 CDK18Q07002 472 aa13.56□□□□□ -0.24
RPE-208ENST00000436630 BCL2L1Q07817 233 aa13.56□□□□□ -0.24
RPE-208ENST00000436630 CDH17Q12864 832 aa13.56□□□□□ -0.24
RPE-208ENST00000436630 SLMAPQ14BN4 828 aa13.56□□□□□ -0.24
RPE-208ENST00000436630 MYLK3Q32MK0 819 aa13.56□□□□□ -0.24
RPE-208ENST00000436630 ATXN7L2Q5T6C5 722 aaPredicted RBP13.56□□□□□ -0.24
RPE-208ENST00000436630 EGFLAMQ63HQ2 1017 aa13.56□□□□□ -0.24
RPE-208ENST00000436630 SDE2Q6IQ49 451 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms