RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 SELENOSQ9BQE4 189 aa10.7□□□□□ -0.7
NEFM-202ENST00000433454 NOD2Q9HC29 1040 aa10.7□□□□□ -0.7
NEFM-202ENST00000433454 SMYD2Q9NRG4 433 aa10.7□□□□□ -0.7
NEFM-202ENST00000433454 ABCB8Q9NUT2 735 aa10.7□□□□□ -0.7
NEFM-202ENST00000433454 ZNF180Q9UJW8 692 aa10.7□□□□□ -0.7
NEFM-202ENST00000433454 MYOFQ9NZM1 2061 aa10.7□□□□□ -0.7
NEFM-202ENST00000433454 IQANK1A0A1B0GTG1 560 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 CXorf51AA0A1B0GTR3 108 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 LOC285095A0A1B0GVY8 99 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 CXorf49A8MYA2 514 aaPredicted RBP10.69□□□□□ -0.7
NEFM-202ENST00000433454 INSIG1O15503 277 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 EPOP01588 193 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 TYRP14679 529 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 HLA-DPA1P20036 260 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 HLA-FP30511 346 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 SERPINH1P50454 418 aaKnown RBP10.69□□□□□ -0.7
NEFM-202ENST00000433454 PLK1P53350 603 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 RHOAP61586 193 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 CDK18Q07002 472 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 MGAT5Q09328 741 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 LY6G5CQ5SRR4 150 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 ANKRD54Q6NXT1 300 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 PKN3Q6P5Z2 889 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 TRABD2AQ86V40 505 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 UNC5BQ8IZJ1 945 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 SMARCD2Q92925 531 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 MFSD3Q96ES6 412 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 FCRL3Q96P31 734 aaPredicted RBP10.69□□□□□ -0.7
NEFM-202ENST00000433454 NUDCD1Q96RS6 583 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 APOL5Q9BWW9 433 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 LINC00597Q9H2U6 94 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 MRM3Q9HC36 420 aaKnown RBP10.69□□□□□ -0.7
NEFM-202ENST00000433454 GDE1Q9NZC3 331 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 MARK1Q9P0L2 795 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 ZFATQ9P243 1243 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 TCAF1Q9Y4C2 921 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 FAM169AQ9Y6X4 670 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 MYLKQ15746 1914 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 ZCWPW2A0A1B0GU75 182 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 LINC01565O15544 149 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 FGF1P05230 155 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 ATXN1LP0C7T5 689 aaKnown RBP10.69□□□□□ -0.7
NEFM-202ENST00000433454 NSUN2Q08J23 767 aaKnown RBP eCLIP10.69□□□□□ -0.7
NEFM-202ENST00000433454 SEPT6Q14141 434 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 FAM78AQ5JUQ0 283 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 SIRPB2Q5JXA9 342 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 MARK2Q7KZI7 788 aaKnown RBP10.69□□□□□ -0.7
NEFM-202ENST00000433454 RASSF3Q86WH2 238 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 ADGRG2Q8IZP9 1017 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 ASB16Q96NS5 453 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 DUS2Q9NX74 493 aaKnown RBP10.69□□□□□ -0.7
NEFM-202ENST00000433454 LHX3Q9UBR4 397 aa10.69□□□□□ -0.7
NEFM-202ENST00000433454 FCF1Q9Y324 198 aaKnown RBP10.69□□□□□ -0.7
NEFM-202ENST00000433454 TNRC18O15417 2968 aaPredicted RBP10.69□□□□□ -0.7
NEFM-202ENST00000433454 HEATR9A2RTY3 570 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 A6NNZ2 444 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 FOXO6A8MYZ6 492 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 KRT37O76014 449 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 MT-CO1P00395 513 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 HOXB8P17481 243 aaPredicted RBP10.68□□□□□ -0.7
NEFM-202ENST00000433454 ADRA1DP25100 572 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 SLC20A2Q08357 652 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 TUBB8Q3ZCM7 444 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 PITRM1Q5JRX3 1037 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 RALGPS1Q5JS13 557 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 LGSNQ5TDP6 509 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 SYCE2Q6PIF2 218 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 RNF135Q8IUD6 432 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 OSCP1Q8WVF1 389 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 LMLNQ96KR4 655 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 CAPS2Q9BXY5 557 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 TRABDQ9H4I3 376 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 PRKAG3Q9UGI9 489 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 GGA2Q9UJY4 613 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 INTS6Q9UL03 887 aaKnown RBP10.68□□□□□ -0.7
NEFM-202ENST00000433454 ARIH1Q9Y4X5 557 aaPredicted RBP10.68□□□□□ -0.7
NEFM-202ENST00000433454 KRT38O76015 456 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 NDST3O95803 873 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 ADH1CP00326 375 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 ERVK-10P10266 1014 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 BRAFP15056 766 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 CA4P22748 312 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 NMBRP28336 390 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 VIPR2P41587 438 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 SERPINB9P50453 376 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 FUT11Q495W5 492 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 CNPY4Q8N129 248 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 BPIFB1Q8TDL5 484 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 MZB1Q8WU39 189 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 RSPRY1Q96DX4 576 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 LRRC3BQ96PB8 259 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 TRIB3Q96RU7 358 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 RANBP9Q96S59 729 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 SMC6Q96SB8 1091 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 TDRD1Q9BXT4 1180 aaKnown RBP10.68□□□□□ -0.7
NEFM-202ENST00000433454 ZNF576Q9H609 170 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 C20orf96Q9NUD7 363 aaPredicted RBP10.68□□□□□ -0.7
NEFM-202ENST00000433454 IL1RAPL1Q9NZN1 696 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 TXNDC16Q9P2K2 825 aa10.68□□□□□ -0.7
NEFM-202ENST00000433454 CDH22Q9UJ99 828 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms