RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 ZNF766Q5HY98 468 aa2.28□□□□□ -2.04
CDC40-204ENST00000431461 OTUD1Q5VV17 481 aaPredicted RBP2.28□□□□□ -2.04
CDC40-204ENST00000431461 KLHL24Q6TFL4 600 aa2.28□□□□□ -2.04
CDC40-204ENST00000431461 PARM1Q6UWI2 310 aa2.28□□□□□ -2.04
CDC40-204ENST00000431461 PRSS45Q7RTY3 260 aa2.28□□□□□ -2.04
CDC40-204ENST00000431461 SERPINA11Q86U17 422 aa2.28□□□□□ -2.04
CDC40-204ENST00000431461 PALB2Q86YC2 1186 aa2.28□□□□□ -2.04
CDC40-204ENST00000431461 CPOQ8IVL8 374 aa2.28□□□□□ -2.04
CDC40-204ENST00000431461 LINS1Q8NG48 757 aa2.28□□□□□ -2.04
CDC40-204ENST00000431461 SLC35F5Q8WV83 523 aa2.28□□□□□ -2.04
CDC40-204ENST00000431461 ST8SIA4Q92187 359 aa2.28□□□□□ -2.04
CDC40-204ENST00000431461 HDAC2Q92769 488 aaKnown RBP2.28□□□□□ -2.04
CDC40-204ENST00000431461 FAM149B1Q96BN6 582 aa2.28□□□□□ -2.04
CDC40-204ENST00000431461 RNF183Q96D59 192 aa2.28□□□□□ -2.04
CDC40-204ENST00000431461 RNFT2Q96EX2 444 aa2.28□□□□□ -2.04
CDC40-204ENST00000431461 MPP4Q96JB8 637 aa2.28□□□□□ -2.04
CDC40-204ENST00000431461 H2AFJQ9BTM1 129 aa2.28□□□□□ -2.04
CDC40-204ENST00000431461 HDHD5Q9BXW7 423 aa2.28□□□□□ -2.04
CDC40-204ENST00000431461 CATSPERBQ9H7T0 1116 aa2.28□□□□□ -2.04
CDC40-204ENST00000431461 ATP8A2Q9NTI2 1148 aa2.28□□□□□ -2.04
CDC40-204ENST00000431461 SPATS2LQ9NUQ6 558 aaKnown RBP2.28□□□□□ -2.04
CDC40-204ENST00000431461 HIF1ANQ9NWT6 349 aa2.28□□□□□ -2.04
CDC40-204ENST00000431461 IRAK4Q9NWZ3 460 aa2.28□□□□□ -2.04
CDC40-204ENST00000431461 SLC25A10Q9UBX3 287 aaPredicted RBP2.28□□□□□ -2.04
CDC40-204ENST00000431461 ARHGAP26Q9UNA1 814 aa2.28□□□□□ -2.04
CDC40-204ENST00000431461 CARD8Q9Y2G2 431 aa2.28□□□□□ -2.04
CDC40-204ENST00000431461 PAM16Q9Y3D7 125 aa2.28□□□□□ -2.04
CDC40-204ENST00000431461 PCDHGB5Q9Y5G0 923 aa2.28□□□□□ -2.04
CDC40-204ENST00000431461 TRBV5-7A0A0A0MS05 114 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 CXorf65A6NEN9 183 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 FAM90A7PA6NKC0 464 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 A6NLC8 198 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 FAM90A22PA8MWA6 464 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 FAM90A12PA8MX19 464 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 FAM90A23PA8MXZ1 464 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 VWA5AO00534 786 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 ACOT8O14734 319 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 TNPO2O14787 897 aaKnown RBP2.27□□□□□ -2.05
CDC40-204ENST00000431461 PER2O15055 1255 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 CBX6O95503 412 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 DDX58O95786 925 aaKnown RBP2.27□□□□□ -2.05
CDC40-204ENST00000431461 POLBP06746 335 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 CYP21A2P08686 494 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 HNRNPA1P09651 372 aaKnown RBP eCLIP2.27□□□□□ -2.05
CDC40-204ENST00000431461 FMO4P31512 558 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 ABCD1P33897 745 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 RFC1P35251 1148 aaPredicted RBP2.27□□□□□ -2.05
CDC40-204ENST00000431461 BSGP35613 385 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 RARSP54136 660 aaKnown RBP2.27□□□□□ -2.05
CDC40-204ENST00000431461 ZP1P60852 638 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 RPL7AP62424 266 aaKnown RBP2.27□□□□□ -2.05
CDC40-204ENST00000431461 GAD2Q05329 585 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 PGM5Q15124 567 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 MAPRE1Q15691 268 aaKnown RBP2.27□□□□□ -2.05
CDC40-204ENST00000431461 RPE65Q16518 533 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 CCNG2Q16589 344 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 GSTA3Q16772 222 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 SMTNL2Q2TAL5 461 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 PLEKHO1Q53GL0 409 aaPredicted RBP2.27□□□□□ -2.05
CDC40-204ENST00000431461 EFHC1Q5JVL4 640 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 Q5PR19 223 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 OTUD3Q5T2D3 398 aaPredicted RBP2.27□□□□□ -2.05
CDC40-204ENST00000431461 SERTAD4-AS1Q5TG53 156 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 ZNF324BQ6AW86 544 aaPredicted RBP2.27□□□□□ -2.05
CDC40-204ENST00000431461 CAPRIN2Q6IMN6 1127 aaKnown RBP2.27□□□□□ -2.05
CDC40-204ENST00000431461 ACAD10Q6JQN1 1059 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 HEPHL1Q6MZM0 1159 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 C4orf50Q6ZRC1 276 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 RSRC2Q7L4I2 434 aaKnown RBP2.27□□□□□ -2.05
CDC40-204ENST00000431461 TADA2BQ86TJ2 420 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 RPAP2Q8IXW5 612 aaPredicted RBP2.27□□□□□ -2.05
CDC40-204ENST00000431461 HACE1Q8IYU2 909 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 SETD9Q8NE22 299 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 GABPB2Q8TAK5 448 aaPredicted RBP2.27□□□□□ -2.05
CDC40-204ENST00000431461 ETNPPLQ8TBG4 499 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 WFIKKN2Q8TEU8 576 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 C2CD4CQ8TF44 421 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 POMGNT1Q8WZA1 660 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 SGCDQ92629 289 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 STAMQ92783 540 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 RILPL2Q969X0 211 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 SLC25A28Q96A46 364 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 MOAP1Q96BY2 351 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 RNF125Q96EQ8 232 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 APOPT1Q96IL0 206 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 SLITRK1Q96PX8 696 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 SCNM1Q9BWG6 230 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 B3GNT4Q9C0J1 378 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 CTDSP1Q9GZU7 261 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 KLHL31Q9H511 634 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 ACAD9Q9H845 621 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 RMI1Q9H9A7 625 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 SPAG4Q9NPE6 437 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 KRCC1Q9NPI7 259 aaPredicted RBP2.27□□□□□ -2.05
CDC40-204ENST00000431461 SAGE1Q9NXZ1 904 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 KIAA1456Q9P272 454 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 TBC1D14Q9P2M4 693 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 CDH22Q9UJ99 828 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 UTS2RQ9UKP6 389 aa2.27□□□□□ -2.05
CDC40-204ENST00000431461 PCDHA12Q9UN75 941 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms