RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 FAM207AQ9NSI2 230 aaPredicted RBP15.12■□□□□ 0.01
MSH5-208ENST00000429846 IPO11Q9UI26 975 aaKnown RBP15.12■□□□□ 0.01
MSH5-208ENST00000429846 ACTL7AQ9Y615 435 aa15.12■□□□□ 0.01
MSH5-208ENST00000429846 U3KQA8 63 aa15.12■□□□□ 0.01
MSH5-208ENST00000429846 SMG1Q96Q15 3661 aaKnown RBP15.12■□□□□ 0.01
MSH5-208ENST00000429846 IGLON5A6NGN9 336 aa15.11■□□□□ 0.01
MSH5-208ENST00000429846 FAM72CH0Y354 149 aa15.11■□□□□ 0.01
MSH5-208ENST00000429846 KRIT1O00522 736 aa15.11■□□□□ 0.01
MSH5-208ENST00000429846 TPP1O14773 563 aa15.11■□□□□ 0.01
MSH5-208ENST00000429846 AQP9O43315 295 aa15.11■□□□□ 0.01
MSH5-208ENST00000429846 KDELR3O43731 214 aa15.11■□□□□ 0.01
MSH5-208ENST00000429846 NEBLO76041 1014 aa15.11■□□□□ 0.01
MSH5-208ENST00000429846 UGT2B4P06133 528 aa15.11■□□□□ 0.01
MSH5-208ENST00000429846 CHRNB2P17787 502 aa15.11■□□□□ 0.01
MSH5-208ENST00000429846 THOP1P52888 689 aa15.11■□□□□ 0.01
MSH5-208ENST00000429846 AIF1P55008 147 aa15.11■□□□□ 0.01
MSH5-208ENST00000429846 PCBP4P57723 403 aaKnown RBP15.11■□□□□ 0.01
MSH5-208ENST00000429846 PTP4A2Q12974 167 aa15.11■□□□□ 0.01
MSH5-208ENST00000429846 MYLK3Q32MK0 819 aa15.11■□□□□ 0.01
MSH5-208ENST00000429846 ZNF542PQ5EBM4 170 aa15.11■□□□□ 0.01
MSH5-208ENST00000429846 FAM72AQ5TYM5 149 aa15.11■□□□□ 0.01
MSH5-208ENST00000429846 FAM72DQ6L9T8 149 aa15.11■□□□□ 0.01
MSH5-208ENST00000429846 SLFN11Q7Z7L1 901 aa15.11■□□□□ 0.01
MSH5-208ENST00000429846 FAM72BQ86X60 149 aa15.11■□□□□ 0.01
MSH5-208ENST00000429846 CCDC185Q8N715 623 aa15.11■□□□□ 0.01
MSH5-208ENST00000429846 C3orf20Q8ND61 904 aa15.11■□□□□ 0.01
MSH5-208ENST00000429846 ZNF248Q8NDW4 579 aa15.11■□□□□ 0.01
MSH5-208ENST00000429846 IFI44Q8TCB0 444 aa15.11■□□□□ 0.01
MSH5-208ENST00000429846 MAPK15Q8TD08 544 aa15.11■□□□□ 0.01
MSH5-208ENST00000429846 GRAMD1AQ96CP6 724 aa15.11■□□□□ 0.01
MSH5-208ENST00000429846 FCRL3Q96P31 734 aaPredicted RBP15.11■□□□□ 0.01
MSH5-208ENST00000429846 SELENOOQ9BVL4 669 aa15.11■□□□□ 0.01
MSH5-208ENST00000429846 VPS16Q9H269 839 aa15.11■□□□□ 0.01
MSH5-208ENST00000429846 NLRC4Q9NPP4 1024 aa15.11■□□□□ 0.01
MSH5-208ENST00000429846 ADAM22Q9P0K1 906 aa15.11■□□□□ 0.01
MSH5-208ENST00000429846 SALL4Q9UJQ4 1053 aa15.11■□□□□ 0.01
MSH5-208ENST00000429846 PCDHB1Q9Y5F3 818 aa15.11■□□□□ 0.01
MSH5-208ENST00000429846 COL27A1Q8IZC6 1860 aaPredicted RBP15.1■□□□□ 0.01
MSH5-208ENST00000429846 TEX51A0A1B0GUA7 166 aa15.1■□□□□ 0.01
MSH5-208ENST00000429846 AREL1O15033 823 aa15.1■□□□□ 0.01
MSH5-208ENST00000429846 ATXN7O15265 892 aaPredicted RBP15.1■□□□□ 0.01
MSH5-208ENST00000429846 IGSF6O95976 241 aa15.1■□□□□ 0.01
MSH5-208ENST00000429846 JUNDP17535 347 aa15.1■□□□□ 0.01
MSH5-208ENST00000429846 GPD1P21695 349 aa15.1■□□□□ 0.01
MSH5-208ENST00000429846 GKP32189 559 aa15.1■□□□□ 0.01
MSH5-208ENST00000429846 KLK7P49862 253 aa15.1■□□□□ 0.01
MSH5-208ENST00000429846 YBEYP58557 167 aaPredicted RBP15.1■□□□□ 0.01
MSH5-208ENST00000429846 ERVPABLB-1P60509 514 aa15.1■□□□□ 0.01
MSH5-208ENST00000429846 YPEL5P62699 121 aa15.1■□□□□ 0.01
MSH5-208ENST00000429846 TLE3Q04726 772 aa15.1■□□□□ 0.01
MSH5-208ENST00000429846 SYCP1Q15431 976 aa15.1■□□□□ 0.01
MSH5-208ENST00000429846 INO80DQ53TQ3 878 aaPredicted RBP15.1■□□□□ 0.01
MSH5-208ENST00000429846 EFHC2Q5JST6 749 aa15.1■□□□□ 0.01
MSH5-208ENST00000429846 GDPD4Q6W3E5 623 aa15.1■□□□□ 0.01
MSH5-208ENST00000429846 PHF13Q86YI8 300 aaPredicted RBP15.1■□□□□ 0.01
MSH5-208ENST00000429846 RTL3Q8N8U3 475 aaKnown RBP15.1■□□□□ 0.01
MSH5-208ENST00000429846 ANKRD20A12PQ8NF67 263 aa15.1■□□□□ 0.01
MSH5-208ENST00000429846 TPCN2Q8NHX9 752 aa15.1■□□□□ 0.01
MSH5-208ENST00000429846 CENPTQ96BT3 561 aa15.1■□□□□ 0.01
MSH5-208ENST00000429846 KLHL32Q96NJ5 620 aa15.1■□□□□ 0.01
MSH5-208ENST00000429846 LGMNQ99538 433 aa15.1■□□□□ 0.01
MSH5-208ENST00000429846 IL12RB2Q99665 862 aa15.1■□□□□ 0.01
MSH5-208ENST00000429846 TTYH3Q9C0H2 523 aa15.1■□□□□ 0.01
MSH5-208ENST00000429846 POLR1BQ9H9Y6 1135 aa15.1■□□□□ 0.01
MSH5-208ENST00000429846 SPASTQ9UBP0 616 aa15.1■□□□□ 0.01
MSH5-208ENST00000429846 APOBEC3BQ9UH17 382 aaKnown RBP15.1■□□□□ 0.01
MSH5-208ENST00000429846 GGT7Q9UJ14 662 aa15.1■□□□□ 0.01
MSH5-208ENST00000429846 ITM2BQ9Y287 266 aa15.1■□□□□ 0.01
MSH5-208ENST00000429846 SIK3Q9Y2K2 1263 aa15.1■□□□□ 0.01
MSH5-208ENST00000429846 MFHAS1Q9Y4C4 1052 aa15.1■□□□□ 0.01
MSH5-208ENST00000429846 EME2A4GXA9 379 aaPredicted RBP15.09■□□□□ 0.01
MSH5-208ENST00000429846 ANKRD62A6NC57 917 aa15.09■□□□□ 0.01
MSH5-208ENST00000429846 EPHB6O15197 1021 aa15.09■□□□□ 0.01
MSH5-208ENST00000429846 SPINT1O43278 529 aa15.09■□□□□ 0.01
MSH5-208ENST00000429846 BUB1O43683 1085 aa15.09■□□□□ 0.01
MSH5-208ENST00000429846 USP12O75317 370 aa15.09■□□□□ 0.01
MSH5-208ENST00000429846 CSO75390 466 aaKnown RBP15.09■□□□□ 0.01
MSH5-208ENST00000429846 TM7SF2O76062 418 aa15.09■□□□□ 0.01
MSH5-208ENST00000429846 TMCC1O94876 653 aa15.09■□□□□ 0.01
MSH5-208ENST00000429846 DESP17661 470 aa15.09■□□□□ 0.01
MSH5-208ENST00000429846 EPHB2P29323 1055 aa15.09■□□□□ 0.01
MSH5-208ENST00000429846 RFC1P35251 1148 aaPredicted RBP15.09■□□□□ 0.01
MSH5-208ENST00000429846 LSSP48449 732 aa15.09■□□□□ 0.01
MSH5-208ENST00000429846 SUOXP51687 545 aa15.09■□□□□ 0.01
MSH5-208ENST00000429846 UCNP55089 124 aa15.09■□□□□ 0.01
MSH5-208ENST00000429846 RHOAP61586 193 aa15.09■□□□□ 0.01
MSH5-208ENST00000429846 GABREP78334 506 aa15.09■□□□□ 0.01
MSH5-208ENST00000429846 GRM3Q14832 879 aa15.09■□□□□ 0.01
MSH5-208ENST00000429846 CLEC16AQ2KHT3 1053 aa15.09■□□□□ 0.01
MSH5-208ENST00000429846 PARP15Q460N3 678 aa15.09■□□□□ 0.01
MSH5-208ENST00000429846 IGF2-ASQ6U949 168 aa15.09■□□□□ 0.01
MSH5-208ENST00000429846 MACC1Q6ZN28 852 aa15.09■□□□□ 0.01
MSH5-208ENST00000429846 MON1BQ7L1V2 547 aa15.09■□□□□ 0.01
MSH5-208ENST00000429846 GPR155Q7Z3F1 870 aa15.09■□□□□ 0.01
MSH5-208ENST00000429846 ZNF354CQ86Y25 554 aa15.09■□□□□ 0.01
MSH5-208ENST00000429846 SPACA3Q8IXA5 215 aa15.09■□□□□ 0.01
MSH5-208ENST00000429846 CXorf40AQ8TE69 158 aa15.09■□□□□ 0.01
MSH5-208ENST00000429846 GLMNQ92990 594 aa15.09■□□□□ 0.01
MSH5-208ENST00000429846 VOPP1Q96AW1 172 aa15.09■□□□□ 0.01
MSH5-208ENST00000429846 EPAS1Q99814 870 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms