RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 SNX12Q9UMY4 172 aa15.14■□□□□ 0.01
GARNL3-204ENST00000429629 TSPAN11A1L157 253 aa15.13■□□□□ 0.01
GARNL3-204ENST00000429629 CFAP69A5D8W1 941 aa15.13■□□□□ 0.01
GARNL3-204ENST00000429629 KCNK1O00180 336 aa15.13■□□□□ 0.01
GARNL3-204ENST00000429629 ENC1O14682 589 aa15.13■□□□□ 0.01
GARNL3-204ENST00000429629 HTRA2O43464 458 aaPredicted RBP15.13■□□□□ 0.01
GARNL3-204ENST00000429629 AP1G1O43747 822 aa15.13■□□□□ 0.01
GARNL3-204ENST00000429629 BNIP3LO60238 219 aa15.13■□□□□ 0.01
GARNL3-204ENST00000429629 NEBLO76041 1014 aa15.13■□□□□ 0.01
GARNL3-204ENST00000429629 RHOBTB1O94844 696 aa15.13■□□□□ 0.01
GARNL3-204ENST00000429629 SERPINA4P29622 427 aa15.13■□□□□ 0.01
GARNL3-204ENST00000429629 RGRP47804 291 aa15.13■□□□□ 0.01
GARNL3-204ENST00000429629 PSMD8P48556 350 aa15.13■□□□□ 0.01
GARNL3-204ENST00000429629 SCNN1BP51168 640 aa15.13■□□□□ 0.01
GARNL3-204ENST00000429629 EIF3EP60228 445 aaKnown RBP15.13■□□□□ 0.01
GARNL3-204ENST00000429629 ETF1P62495 437 aaKnown RBP15.13■□□□□ 0.01
GARNL3-204ENST00000429629 POLR2LP62875 67 aaKnown RBP15.13■□□□□ 0.01
GARNL3-204ENST00000429629 BCL2L1Q07817 233 aa15.13■□□□□ 0.01
GARNL3-204ENST00000429629 WASHC5Q12768 1159 aa15.13■□□□□ 0.01
GARNL3-204ENST00000429629 ATXN7L2Q5T6C5 722 aaPredicted RBP15.13■□□□□ 0.01
GARNL3-204ENST00000429629 BRAT1Q6PJG6 821 aa15.13■□□□□ 0.01
GARNL3-204ENST00000429629 ERN2Q76MJ5 926 aaKnown RBP15.13■□□□□ 0.01
GARNL3-204ENST00000429629 ZC3H18Q86VM9 953 aaKnown RBP15.13■□□□□ 0.01
GARNL3-204ENST00000429629 KMT2EQ8IZD2 1858 aa15.13■□□□□ 0.01
GARNL3-204ENST00000429629 RYBPQ8N488 228 aaPredicted RBP15.13■□□□□ 0.01
GARNL3-204ENST00000429629 HDDC3Q8N4P3 179 aa15.13■□□□□ 0.01
GARNL3-204ENST00000429629 AADATQ8N5Z0 425 aa15.13■□□□□ 0.01
GARNL3-204ENST00000429629 ARRDC2Q8TBH0 407 aa15.13■□□□□ 0.01
GARNL3-204ENST00000429629 ACTRT1Q8TDG2 376 aa15.13■□□□□ 0.01
GARNL3-204ENST00000429629 ECHDC3Q96DC8 303 aa15.13■□□□□ 0.01
GARNL3-204ENST00000429629 ZNF419Q96HQ0 510 aaPredicted RBP15.13■□□□□ 0.01
GARNL3-204ENST00000429629 TPSD1Q9BZJ3 242 aa15.13■□□□□ 0.01
GARNL3-204ENST00000429629 SLC6A17Q9H1V8 727 aa15.13■□□□□ 0.01
GARNL3-204ENST00000429629 NEUROG2Q9H2A3 272 aa15.13■□□□□ 0.01
GARNL3-204ENST00000429629 USP29Q9HBJ7 922 aa15.13■□□□□ 0.01
GARNL3-204ENST00000429629 DRG1Q9Y295 367 aaKnown RBP15.13■□□□□ 0.01
GARNL3-204ENST00000429629 C5orf60A6NFR6 353 aa15.12■□□□□ 0.01
GARNL3-204ENST00000429629 H7C0C1 242 aa15.12■□□□□ 0.01
GARNL3-204ENST00000429629 KPNA3O00505 521 aaPredicted RBP15.12■□□□□ 0.01
GARNL3-204ENST00000429629 TRAFD1O14545 582 aaPredicted RBP15.12■□□□□ 0.01
GARNL3-204ENST00000429629 CEP104O60308 925 aa15.12■□□□□ 0.01
GARNL3-204ENST00000429629 ATP1A1P05023 1023 aaKnown RBP15.12■□□□□ 0.01
GARNL3-204ENST00000429629 PTPN3P26045 913 aa15.12■□□□□ 0.01
GARNL3-204ENST00000429629 NUDT1P36639 197 aa15.12■□□□□ 0.01
GARNL3-204ENST00000429629 DPP6P42658 865 aa15.12■□□□□ 0.01
GARNL3-204ENST00000429629 ATP5OP48047 213 aa15.12■□□□□ 0.01
GARNL3-204ENST00000429629 NEK3P51956 506 aa15.12■□□□□ 0.01
GARNL3-204ENST00000429629 RPL26P61254 145 aaKnown RBP15.12■□□□□ 0.01
GARNL3-204ENST00000429629 FOXJ1Q92949 421 aa15.12■□□□□ 0.01
GARNL3-204ENST00000429629 TADA1Q96BN2 335 aa15.12■□□□□ 0.01
GARNL3-204ENST00000429629 TOE1Q96GM8 510 aaKnown RBP15.12■□□□□ 0.01
GARNL3-204ENST00000429629 PPP1R2P1Q96PQ5 205 aa15.12■□□□□ 0.01
GARNL3-204ENST00000429629 OSBPL9Q96SU4 736 aa15.12■□□□□ 0.01
GARNL3-204ENST00000429629 SLC25A51Q9H1U9 297 aa15.12■□□□□ 0.01
GARNL3-204ENST00000429629 ZDHHC6Q9H6R6 413 aa15.12■□□□□ 0.01
GARNL3-204ENST00000429629 NOD2Q9HC29 1040 aa15.12■□□□□ 0.01
GARNL3-204ENST00000429629 NT5MQ9NPB1 228 aa15.12■□□□□ 0.01
GARNL3-204ENST00000429629 SCUBE2Q9NQ36 999 aa15.12■□□□□ 0.01
GARNL3-204ENST00000429629 RNF14Q9UBS8 474 aa15.12■□□□□ 0.01
GARNL3-204ENST00000429629 MBD1Q9UIS9 605 aaPredicted RBP15.12■□□□□ 0.01
GARNL3-204ENST00000429629 RPL26L1Q9UNX3 145 aaKnown RBP15.12■□□□□ 0.01
GARNL3-204ENST00000429629 MYO18AQ92614 2054 aaKnown RBP15.12■□□□□ 0.01
GARNL3-204ENST00000429629 TCRBV7S2A1N4TA0A589 114 aa15.11■□□□□ 0.01
GARNL3-204ENST00000429629 CTAGE9A4FU28 777 aa15.11■□□□□ 0.01
GARNL3-204ENST00000429629 LRRC72A6NJI9 287 aa15.11■□□□□ 0.01
GARNL3-204ENST00000429629 C16orf96A6NNT2 1141 aa15.11■□□□□ 0.01
GARNL3-204ENST00000429629 PLRG1O43660 514 aaKnown RBP15.11■□□□□ 0.01
GARNL3-204ENST00000429629 RNASEH2AO75792 299 aaKnown RBP15.11■□□□□ 0.01
GARNL3-204ENST00000429629 STK10O94804 968 aaKnown RBP15.11■□□□□ 0.01
GARNL3-204ENST00000429629 FGGP02679 453 aa15.11■□□□□ 0.01
GARNL3-204ENST00000429629 SERPINF2P08697 491 aa15.11■□□□□ 0.01
GARNL3-204ENST00000429629 CA4P22748 312 aa15.11■□□□□ 0.01
GARNL3-204ENST00000429629 CNTN1Q12860 1018 aa15.11■□□□□ 0.01
GARNL3-204ENST00000429629 ZBTB17Q13105 803 aa15.11■□□□□ 0.01
GARNL3-204ENST00000429629 SIM2Q14190 667 aaPredicted RBP15.11■□□□□ 0.01
GARNL3-204ENST00000429629 SIX1Q15475 284 aaPredicted RBP15.11■□□□□ 0.01
GARNL3-204ENST00000429629 OASLQ15646 514 aaKnown RBP15.11■□□□□ 0.01
GARNL3-204ENST00000429629 ELF2Q15723 593 aa15.11■□□□□ 0.01
GARNL3-204ENST00000429629 PLK5Q496M5 336 aa15.11■□□□□ 0.01
GARNL3-204ENST00000429629 PIP5KL1Q5T9C9 394 aa15.11■□□□□ 0.01
GARNL3-204ENST00000429629 AGBL4Q5VU57 503 aa15.11■□□□□ 0.01
GARNL3-204ENST00000429629 PMS2CLQ68D20 193 aa15.11■□□□□ 0.01
GARNL3-204ENST00000429629 DARS2Q6PI48 645 aaKnown RBP15.11■□□□□ 0.01
GARNL3-204ENST00000429629 LPCAT2Q7L5N7 544 aa15.11■□□□□ 0.01
GARNL3-204ENST00000429629 OR2T34Q8NGX1 318 aa15.11■□□□□ 0.01
GARNL3-204ENST00000429629 RLN3Q8WXF3 142 aa15.11■□□□□ 0.01
GARNL3-204ENST00000429629 ARRDC3Q96B67 414 aa15.11■□□□□ 0.01
GARNL3-204ENST00000429629 RTP4Q96DX8 246 aa15.11■□□□□ 0.01
GARNL3-204ENST00000429629 IMP4Q96G21 291 aaKnown RBP15.11■□□□□ 0.01
GARNL3-204ENST00000429629 EXOC2Q96KP1 924 aa15.11■□□□□ 0.01
GARNL3-204ENST00000429629 KLHL32Q96NJ5 620 aa15.11■□□□□ 0.01
GARNL3-204ENST00000429629 WDR24Q96S15 920 aa15.11■□□□□ 0.01
GARNL3-204ENST00000429629 NAPGQ99747 312 aaPredicted RBP15.11■□□□□ 0.01
GARNL3-204ENST00000429629 SEMA3CQ99985 751 aa15.11■□□□□ 0.01
GARNL3-204ENST00000429629 PREBQ9HCU5 417 aa15.11■□□□□ 0.01
GARNL3-204ENST00000429629 VPS45Q9NRW7 570 aa15.11■□□□□ 0.01
GARNL3-204ENST00000429629 CYP8B1Q9UNU6 501 aa15.11■□□□□ 0.01
GARNL3-204ENST00000429629 PPIL1Q9Y3C6 166 aa15.11■□□□□ 0.01
GARNL3-204ENST00000429629 CKAP5Q14008 2032 aa15.1■□□□□ 0.01
GARNL3-204ENST00000429629 A0A1W2PP55 124 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms