RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 SNAP91O60641 907 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 CCDC166P0CW27 439 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 CD86P42081 329 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 GPR1P46091 355 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 RAB10P61026 200 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 PPIDQ08752 370 aaKnown RBP12.91□□□□□ -0.34
LDB3-205ENST00000429277 DNAJC14Q6Y2X3 702 aaPredicted RBP12.91□□□□□ -0.34
LDB3-205ENST00000429277 C16orf59Q7L2K0 433 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 CLVS1Q8IUQ0 354 aaPredicted RBP12.91□□□□□ -0.34
LDB3-205ENST00000429277 ZNF671Q8TAW3 534 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 SHC3Q92529 594 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 SNRNP25Q9BV90 132 aaKnown RBP12.91□□□□□ -0.34
LDB3-205ENST00000429277 SPAG4Q9NPE6 437 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 A0A0B4J269 797 aa12.9□□□□□ -0.34
LDB3-205ENST00000429277 A0A1W2PQ67 120 aa12.9□□□□□ -0.34
LDB3-205ENST00000429277 PROCP04070 461 aa12.9□□□□□ -0.34
LDB3-205ENST00000429277 FGRP09769 529 aa12.9□□□□□ -0.34
LDB3-205ENST00000429277 FAM183BPQ6ZVS7 135 aa12.9□□□□□ -0.34
LDB3-205ENST00000429277 OR52K1Q8NGK4 314 aa12.9□□□□□ -0.34
LDB3-205ENST00000429277 RNASE11Q8TAA1 199 aaKnown RBP12.9□□□□□ -0.34
LDB3-205ENST00000429277 ACO2Q99798 780 aaKnown RBP12.9□□□□□ -0.34
LDB3-205ENST00000429277 RNF208Q9H0X6 261 aa12.9□□□□□ -0.34
LDB3-205ENST00000429277 RHBDL2Q9NX52 303 aa12.9□□□□□ -0.34
LDB3-205ENST00000429277 MRPL39Q9NYK5 338 aaKnown RBP12.9□□□□□ -0.34
LDB3-205ENST00000429277 BCL9O00512 1426 aa12.9□□□□□ -0.34
LDB3-205ENST00000429277 NDUFS2O75306 463 aa12.9□□□□□ -0.34
LDB3-205ENST00000429277 MYBL2P10244 700 aa12.9□□□□□ -0.34
LDB3-205ENST00000429277 LPOP22079 712 aaPredicted RBP12.9□□□□□ -0.34
LDB3-205ENST00000429277 KELP23276 732 aa12.9□□□□□ -0.34
LDB3-205ENST00000429277 RPA3P35244 121 aaPredicted RBP12.9□□□□□ -0.34
LDB3-205ENST00000429277 GRM5P41594 1212 aa12.9□□□□□ -0.34
LDB3-205ENST00000429277 CRATP43155 626 aa12.9□□□□□ -0.34
LDB3-205ENST00000429277 ZC3H12AQ5D1E8 599 aaKnown RBP12.9□□□□□ -0.34
LDB3-205ENST00000429277 MAP1SQ66K74 1059 aaPredicted RBP12.9□□□□□ -0.34
LDB3-205ENST00000429277 DENND6AQ8IWF6 608 aa12.9□□□□□ -0.34
LDB3-205ENST00000429277 AMER2Q8N7J2 671 aa12.9□□□□□ -0.34
LDB3-205ENST00000429277 TMEM161BQ8NDZ6 487 aa12.9□□□□□ -0.34
LDB3-205ENST00000429277 MYLPFQ96A32 169 aa12.9□□□□□ -0.34
LDB3-205ENST00000429277 UNKQ9C0B0 810 aaKnown RBP12.9□□□□□ -0.34
LDB3-205ENST00000429277 DDX4Q9NQI0 724 aaKnown RBP12.9□□□□□ -0.34
LDB3-205ENST00000429277 GALNT8Q9NY28 637 aa12.9□□□□□ -0.34
LDB3-205ENST00000429277 FAM50BQ9Y247 325 aa12.9□□□□□ -0.34
LDB3-205ENST00000429277 SLC27A6Q9Y2P4 619 aa12.9□□□□□ -0.34
LDB3-205ENST00000429277 TRIM17Q9Y577 477 aa12.9□□□□□ -0.34
LDB3-205ENST00000429277 NFKB1P19838 968 aa12.9□□□□□ -0.34
LDB3-205ENST00000429277 TPP2P29144 1249 aaPredicted RBP12.9□□□□□ -0.34
LDB3-205ENST00000429277 CCR4P51679 360 aa12.9□□□□□ -0.34
LDB3-205ENST00000429277 IFI35P80217 286 aaPredicted RBP12.9□□□□□ -0.34
LDB3-205ENST00000429277 PPP3CAQ08209 521 aa12.9□□□□□ -0.34
LDB3-205ENST00000429277 RAP1GAP2Q684P5 730 aa12.9□□□□□ -0.34
LDB3-205ENST00000429277 CES3Q6UWW8 571 aa12.9□□□□□ -0.34
LDB3-205ENST00000429277 BEND7Q8N7W2 519 aaPredicted RBP12.9□□□□□ -0.34
LDB3-205ENST00000429277 PIGUQ9H490 435 aa12.9□□□□□ -0.34
LDB3-205ENST00000429277 VPS4AQ9UN37 437 aa12.9□□□□□ -0.34
LDB3-205ENST00000429277 C1orf232A0A0U1RR37 186 aa12.9□□□□□ -0.35
LDB3-205ENST00000429277 SMIM10L2AP0DMW4 78 aa12.9□□□□□ -0.35
LDB3-205ENST00000429277 SMIM10L2BP0DMW5 78 aa12.9□□□□□ -0.35
LDB3-205ENST00000429277 ITGAXP20702 1163 aa12.9□□□□□ -0.35
LDB3-205ENST00000429277 HTR7P34969 479 aa12.9□□□□□ -0.35
LDB3-205ENST00000429277 POLD2P49005 469 aa12.9□□□□□ -0.35
LDB3-205ENST00000429277 CCR3P51677 355 aa12.9□□□□□ -0.35
LDB3-205ENST00000429277 RINLQ6ZS11 566 aa12.9□□□□□ -0.35
LDB3-205ENST00000429277 PIGZQ86VD9 579 aa12.9□□□□□ -0.35
LDB3-205ENST00000429277 NUAK2Q9H093 628 aa12.9□□□□□ -0.35
LDB3-205ENST00000429277 C8orf4Q9NR00 106 aa12.9□□□□□ -0.35
LDB3-205ENST00000429277 TBC1D30Q9Y2I9 924 aa12.9□□□□□ -0.35
LDB3-205ENST00000429277 C15orf41Q9Y2V0 281 aa12.9□□□□□ -0.35
LDB3-205ENST00000429277 LOC102724159A0A0B4J2E5 919 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 IRGMA1A4Y4 181 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 TRIM38O00635 465 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 SPTLC1O15269 473 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 PSMG1O95456 288 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 RCVRNP35243 200 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 PRKG2Q13237 762 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 PWP2Q15269 919 aaKnown RBP12.89□□□□□ -0.35
LDB3-205ENST00000429277 TRIM40Q6P9F5 258 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 UNC5AQ6ZN44 842 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 RERGQ96A58 199 aaPredicted RBP12.89□□□□□ -0.35
LDB3-205ENST00000429277 CDT1Q9H211 546 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 KCNE2Q9Y6J6 123 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 RGSL1A5PLK6 1076 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 TRIM43BA6NCK2 446 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 SERPINB7O75635 380 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 CDC25CP30307 473 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 HSPA14Q0VDF9 509 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 BMT2Q1RMZ1 405 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 TCEAL5Q5H9L2 206 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 KLHL35Q6PF15 583 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 CYP2R1Q6VVX0 501 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 GPRIN3Q6ZVF9 776 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 C12orf56Q8IXR9 622 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 POU5F2Q8N7G0 328 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 AKT1S1Q96B36 256 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 GLIS2Q9BZE0 524 aaPredicted RBP12.89□□□□□ -0.35
LDB3-205ENST00000429277 PDGFDQ9GZP0 370 aaPredicted RBP12.89□□□□□ -0.35
LDB3-205ENST00000429277 POLR1BQ9H9Y6 1135 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 CCNB1IP1Q9NPC3 277 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 MBD2Q9UBB5 411 aa12.89□□□□□ -0.35
LDB3-205ENST00000429277 MRPS33Q9Y291 106 aaKnown RBP12.89□□□□□ -0.35
LDB3-205ENST00000429277 CHURC1-FNTBB4DL54 471 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms