RNA–Protein interactions for RNA: ENST00000429040.5

SLC39A1-207, Transcript of solute carrier family 39 member 1, humanhuman

TSL 2

Gene SLC39A1, Length 1,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-207ENST00000429040 MAPK8P45983 427 aa17.29■□□□□ 0.36
SLC39A1-207ENST00000429040 PAPOLAP51003 745 aaKnown RBP17.29■□□□□ 0.36
SLC39A1-207ENST00000429040 SLC10A2Q12908 348 aaPredicted RBP17.29■□□□□ 0.36
SLC39A1-207ENST00000429040 TMEM215Q68D42 235 aa17.29■□□□□ 0.36
SLC39A1-207ENST00000429040 TTC27Q6P3X3 843 aa17.29■□□□□ 0.36
SLC39A1-207ENST00000429040 C4orf22Q6V702 233 aa17.29■□□□□ 0.36
SLC39A1-207ENST00000429040 RABEPKQ7Z6M1 372 aa17.29■□□□□ 0.36
SLC39A1-207ENST00000429040 SLC41A1Q8IVJ1 513 aa17.29■□□□□ 0.36
SLC39A1-207ENST00000429040 CCDC13Q8IYE1 715 aa17.29■□□□□ 0.36
SLC39A1-207ENST00000429040 FIBINQ8TAL6 211 aa17.29■□□□□ 0.36
SLC39A1-207ENST00000429040 HTR3CQ8WXA8 447 aa17.29■□□□□ 0.36
SLC39A1-207ENST00000429040 SORCS1Q8WY21 1168 aa17.29■□□□□ 0.36
SLC39A1-207ENST00000429040 FATE1Q969F0 183 aa17.29■□□□□ 0.36
SLC39A1-207ENST00000429040 HMCESQ96FZ2 354 aa17.29■□□□□ 0.36
SLC39A1-207ENST00000429040 HSPA12BQ96MM6 686 aa17.29■□□□□ 0.36
SLC39A1-207ENST00000429040 VAT1Q99536 393 aa17.29■□□□□ 0.36
SLC39A1-207ENST00000429040 TMEM121Q9BTD3 319 aa17.29■□□□□ 0.36
SLC39A1-207ENST00000429040 CD93Q9NPY3 652 aa17.29■□□□□ 0.36
SLC39A1-207ENST00000429040 IPO11Q9UI26 975 aaKnown RBP17.29■□□□□ 0.36
SLC39A1-207ENST00000429040 IFNB1P01574 187 aa17.28■□□□□ 0.36
SLC39A1-207ENST00000429040 SERPINF2P08697 491 aa17.28■□□□□ 0.36
SLC39A1-207ENST00000429040 CSRP1P21291 193 aaKnown RBP17.28■□□□□ 0.36
SLC39A1-207ENST00000429040 MCM3P25205 808 aa17.28■□□□□ 0.36
SLC39A1-207ENST00000429040 CD6P30203 668 aa17.28■□□□□ 0.36
SLC39A1-207ENST00000429040 KCNJ1P48048 391 aa17.28■□□□□ 0.36
SLC39A1-207ENST00000429040 GEMIN4P57678 1058 aaKnown RBP17.28■□□□□ 0.36
SLC39A1-207ENST00000429040 P3H1Q32P28 736 aa17.28■□□□□ 0.36
SLC39A1-207ENST00000429040 TMCO4Q5TGY1 634 aa17.28■□□□□ 0.36
SLC39A1-207ENST00000429040 RNF219Q5W0B1 726 aaPredicted RBP17.28■□□□□ 0.36
SLC39A1-207ENST00000429040 CXorf57Q6NSI4 855 aaKnown RBP17.28■□□□□ 0.36
SLC39A1-207ENST00000429040 SERPINA13PQ6UXR4 307 aa17.28■□□□□ 0.36
SLC39A1-207ENST00000429040 JAMLQ86YT9 394 aa17.28■□□□□ 0.36
SLC39A1-207ENST00000429040 TMPRSS6Q8IU80 811 aa17.28■□□□□ 0.36
SLC39A1-207ENST00000429040 BBS5Q8N3I7 341 aa17.28■□□□□ 0.36
SLC39A1-207ENST00000429040 WFIKKN2Q8TEU8 576 aa17.28■□□□□ 0.36
SLC39A1-207ENST00000429040 ARHGEF2Q92974 986 aaKnown RBP17.28■□□□□ 0.36
SLC39A1-207ENST00000429040 ZNF419Q96HQ0 510 aaPredicted RBP17.28■□□□□ 0.36
SLC39A1-207ENST00000429040 LGMNQ99538 433 aa17.28■□□□□ 0.36
SLC39A1-207ENST00000429040 SPON2Q9BUD6 331 aa17.28■□□□□ 0.36
SLC39A1-207ENST00000429040 C2orf49Q9BVC5 232 aaPredicted RBP17.28■□□□□ 0.36
SLC39A1-207ENST00000429040 MKRN2Q9H000 416 aaKnown RBP17.28■□□□□ 0.36
SLC39A1-207ENST00000429040 PCDH9Q9HC56 1237 aa17.28■□□□□ 0.36
SLC39A1-207ENST00000429040 ATP13A1Q9HD20 1204 aa17.28■□□□□ 0.36
SLC39A1-207ENST00000429040 ITM2CQ9NQX7 267 aa17.28■□□□□ 0.36
SLC39A1-207ENST00000429040 NDFIP2Q9NV92 336 aa17.28■□□□□ 0.36
SLC39A1-207ENST00000429040 ASIC3Q9UHC3 531 aa17.28■□□□□ 0.36
SLC39A1-207ENST00000429040 VPS28Q9UK41 221 aa17.28■□□□□ 0.36
SLC39A1-207ENST00000429040 ANGPTL2Q9UKU9 493 aa17.28■□□□□ 0.36
SLC39A1-207ENST00000429040 TARSL2A2RTX5 802 aaKnown RBP17.27■□□□□ 0.36
SLC39A1-207ENST00000429040 GIPC1O14908 333 aa17.27■□□□□ 0.36
SLC39A1-207ENST00000429040 TTI1O43156 1089 aa17.27■□□□□ 0.36
SLC39A1-207ENST00000429040 RAD51CO43502 376 aa17.27■□□□□ 0.36
SLC39A1-207ENST00000429040 EPHX1P07099 455 aa17.27■□□□□ 0.36
SLC39A1-207ENST00000429040 TUBBP07437 444 aa17.27■□□□□ 0.36
SLC39A1-207ENST00000429040 PRKCHP24723 683 aa17.27■□□□□ 0.36
SLC39A1-207ENST00000429040 RBL1P28749 1068 aa17.27■□□□□ 0.36
SLC39A1-207ENST00000429040 HLA-FP30511 346 aa17.27■□□□□ 0.36
SLC39A1-207ENST00000429040 ATXN3P54252 364 aaPredicted RBP17.27■□□□□ 0.36
SLC39A1-207ENST00000429040 IL10RBQ08334 325 aa17.27■□□□□ 0.36
SLC39A1-207ENST00000429040 SERINC3Q13530 473 aa17.27■□□□□ 0.36
SLC39A1-207ENST00000429040 PTK6Q13882 451 aa17.27■□□□□ 0.36
SLC39A1-207ENST00000429040 SYCP2LQ5T4T6 812 aa17.27■□□□□ 0.36
SLC39A1-207ENST00000429040 RGL4Q8IZJ4 473 aa17.27■□□□□ 0.36
SLC39A1-207ENST00000429040 FAM71DQ8N9W8 422 aa17.27■□□□□ 0.36
SLC39A1-207ENST00000429040 DCAF4L2Q8NA75 395 aa17.27■□□□□ 0.36
SLC39A1-207ENST00000429040 MYRIPQ8NFW9 859 aa17.27■□□□□ 0.36
SLC39A1-207ENST00000429040 PRCCQ92733 491 aaPredicted RBP17.27■□□□□ 0.36
SLC39A1-207ENST00000429040 FOXJ1Q92949 421 aa17.27■□□□□ 0.36
SLC39A1-207ENST00000429040 RTP4Q96DX8 246 aa17.27■□□□□ 0.36
SLC39A1-207ENST00000429040 SIPA1Q96FS4 1042 aa17.27■□□□□ 0.36
SLC39A1-207ENST00000429040 ZNF599Q96NL3 588 aa17.27■□□□□ 0.36
SLC39A1-207ENST00000429040 NOL6Q9H6R4 1146 aaKnown RBP17.27■□□□□ 0.36
SLC39A1-207ENST00000429040 FSCN3Q9NQT6 498 aa17.27■□□□□ 0.36
SLC39A1-207ENST00000429040 WSB2Q9NYS7 404 aaPredicted RBP17.27■□□□□ 0.36
SLC39A1-207ENST00000429040 SEPT10Q9P0V9 454 aa17.27■□□□□ 0.36
SLC39A1-207ENST00000429040 USP36Q9P275 1121 aaKnown RBP17.27■□□□□ 0.36
SLC39A1-207ENST00000429040 PAK5Q9P286 719 aa17.27■□□□□ 0.36
SLC39A1-207ENST00000429040 RNF103O00237 685 aa17.26■□□□□ 0.35
SLC39A1-207ENST00000429040 OPHN1O60890 802 aa17.26■□□□□ 0.35
SLC39A1-207ENST00000429040 HEXIM1O94992 359 aaKnown RBP17.26■□□□□ 0.35
SLC39A1-207ENST00000429040 KRT14P02533 472 aa17.26■□□□□ 0.35
SLC39A1-207ENST00000429040 CEACAM1P13688 526 aa17.26■□□□□ 0.35
SLC39A1-207ENST00000429040 CSKP41240 450 aa17.26■□□□□ 0.35
SLC39A1-207ENST00000429040 PTGIRP43119 386 aa17.26■□□□□ 0.35
SLC39A1-207ENST00000429040 RENBPP51606 427 aa17.26■□□□□ 0.35
SLC39A1-207ENST00000429040 WDR45BQ5MNZ6 344 aa17.26■□□□□ 0.35
SLC39A1-207ENST00000429040 ITPRIPL1Q6GPH6 555 aa17.26■□□□□ 0.35
SLC39A1-207ENST00000429040 RETSATQ6NUM9 610 aa17.26■□□□□ 0.35
SLC39A1-207ENST00000429040 ARHGEF18Q6ZSZ5 1173 aa17.26■□□□□ 0.35
SLC39A1-207ENST00000429040 KIAA0907Q7Z7F0 614 aaPredicted RBP17.26■□□□□ 0.35
SLC39A1-207ENST00000429040 AHI1Q8N157 1196 aa17.26■□□□□ 0.35
SLC39A1-207ENST00000429040 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.26■□□□□ 0.35
SLC39A1-207ENST00000429040 BBOF1Q8ND07 529 aa17.26■□□□□ 0.35
SLC39A1-207ENST00000429040 LRRN4CLQ8ND94 238 aa17.26■□□□□ 0.35
SLC39A1-207ENST00000429040 LRRC45Q96CN5 670 aa17.26■□□□□ 0.35
SLC39A1-207ENST00000429040 TOE1Q96GM8 510 aaKnown RBP17.26■□□□□ 0.35
SLC39A1-207ENST00000429040 PPP1R2P1Q96PQ5 205 aa17.26■□□□□ 0.35
SLC39A1-207ENST00000429040 LRRC1Q9BTT6 524 aa17.26■□□□□ 0.35
SLC39A1-207ENST00000429040 GTPBP2Q9BX10 602 aaKnown RBP17.26■□□□□ 0.35
SLC39A1-207ENST00000429040 CAPN10Q9HC96 672 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms