RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 SPATA22Q8NHS9 363 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 FAM76AQ8TAV0 307 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 RIN3Q8TB24 985 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 FBF1Q8TES7 1133 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 USP33Q8TEY7 942 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 SLC44A1Q8WWI5 657 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 ING5Q8WYH8 240 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 ELSPBP1Q96BH3 223 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 MSLNLQ96KJ4 702 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 ZSWIM3Q96MP5 696 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 TRIB3Q96RU7 358 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 SEMA3CQ99985 751 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 FICDQ9BVA6 458 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 ADGRE3Q9BY15 652 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 CNOT10Q9H9A5 744 aaKnown RBP9.18□□□□□ -0.94
NR1I3-209ENST00000428574 ZFP14Q9HCL3 533 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 DNAJC17Q9NVM6 304 aaKnown RBP9.18□□□□□ -0.94
NR1I3-209ENST00000428574 HACD3Q9P035 362 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 EPS15L1Q9UBC2 864 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 LHX3Q9UBR4 397 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 SLC25A13Q9UJS0 675 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 SLC8A2Q9UPR5 921 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 TTLL3Q9Y4R7 772 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 MTCH2Q9Y6C9 303 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 IKBKGQ9Y6K9 419 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 NEDD8-MDP1E9PL57 170 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 SIN3BO75182 1162 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 IGSF6O95976 241 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 MT-CYBP00156 380 aaPredicted RBP9.17□□□□□ -0.94
NR1I3-209ENST00000428574 INHBAP08476 426 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 MGAT1P26572 445 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 HLA-FP30511 346 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 SSTR1P30872 391 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 HADHAP40939 763 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 GRIA1P42261 906 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 MSH2P43246 934 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 SLC18A1P54219 525 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 SESN2P58004 480 aaPredicted RBP9.17□□□□□ -0.94
NR1I3-209ENST00000428574 DSC2Q02487 901 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 ACVR1Q04771 509 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 MGAT5Q09328 741 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 TTMPQ5BVD1 217 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 KIAA0930Q6ICG6 404 aaPredicted RBP9.17□□□□□ -0.94
NR1I3-209ENST00000428574 GPR153Q6NV75 609 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 CASC4Q6P4E1 433 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 PKN3Q6P5Z2 889 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 NCEH1Q6PIU2 408 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 KDM7AQ6ZMT4 941 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 TPGS1Q6ZTW0 290 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 KIAA0408Q6ZU52 694 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 GALNT7Q86SF2 657 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 IGDCC3Q8IVU1 814 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 SUGP1Q8IWZ8 645 aaKnown RBP9.17□□□□□ -0.94
NR1I3-209ENST00000428574 CPA6Q8N4T0 437 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 SMRP1Q8NCR6 262 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 IPMKQ8NFU5 416 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 OR2W6PQ8NHA6 318 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 WFDC5Q8TCV5 224 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 NXPE3Q969Y0 559 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 ALKBH8Q96BT7 664 aaKnown RBP9.17□□□□□ -0.94
NR1I3-209ENST00000428574 IFT43Q96FT9 208 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 SGSM3Q96HU1 749 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 LRIG1Q96JA1 1093 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 PAFAH2Q99487 392 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 FAM83CQ9BQN1 747 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 TDRD1Q9BXT4 1180 aaKnown RBP9.17□□□□□ -0.94
NR1I3-209ENST00000428574 CPEB1Q9BZB8 566 aaKnown RBP9.17□□□□□ -0.94
NR1I3-209ENST00000428574 SMG9Q9H0W8 520 aaKnown RBP9.17□□□□□ -0.94
NR1I3-209ENST00000428574 TRABDQ9H4I3 376 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 PLAC1Q9HBJ0 212 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 SCUBE2Q9NQ36 999 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 SYBUQ9NX95 663 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 CLEC1BQ9P126 229 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 INTS6Q9UL03 887 aaKnown RBP9.17□□□□□ -0.94
NR1I3-209ENST00000428574 TCAF1Q9Y4C2 921 aa9.17□□□□□ -0.94
NR1I3-209ENST00000428574 CHD7Q9P2D1 2997 aa9.16□□□□□ -0.94
NR1I3-209ENST00000428574 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.16□□□□□ -0.94
NR1I3-209ENST00000428574 IQANK1A0A1B0GTG1 560 aa9.16□□□□□ -0.94
NR1I3-209ENST00000428574 ZCWPW2A0A1B0GU75 182 aa9.16□□□□□ -0.94
NR1I3-209ENST00000428574 MROH6A6NGR9 719 aa9.16□□□□□ -0.94
NR1I3-209ENST00000428574 SRRM3A6NNA2 597 aaPredicted RBP9.16□□□□□ -0.94
NR1I3-209ENST00000428574 HEPACAM2A8MVW5 462 aa9.16□□□□□ -0.94
NR1I3-209ENST00000428574 WASH3PC4AMC7 463 aa9.16□□□□□ -0.94
NR1I3-209ENST00000428574 NPC1O15118 1278 aa9.16□□□□□ -0.94
NR1I3-209ENST00000428574 MUSKO15146 869 aa9.16□□□□□ -0.94
NR1I3-209ENST00000428574 HTRA2O43464 458 aaPredicted RBP9.16□□□□□ -0.94
NR1I3-209ENST00000428574 ATP9BO43861 1147 aa9.16□□□□□ -0.94
NR1I3-209ENST00000428574 SNAP91O60641 907 aa9.16□□□□□ -0.94
NR1I3-209ENST00000428574 TBX10O75333 385 aa9.16□□□□□ -0.94
NR1I3-209ENST00000428574 PMPCBO75439 489 aa9.16□□□□□ -0.94
NR1I3-209ENST00000428574 BANF1O75531 89 aa9.16□□□□□ -0.94
NR1I3-209ENST00000428574 KRT37O76014 449 aa9.16□□□□□ -0.94
NR1I3-209ENST00000428574 KRT38O76015 456 aa9.16□□□□□ -0.94
NR1I3-209ENST00000428574 CRTAMO95727 393 aa9.16□□□□□ -0.94
NR1I3-209ENST00000428574 ATP5BP06576 529 aaKnown RBP9.16□□□□□ -0.94
NR1I3-209ENST00000428574 ATXN1LP0C7T5 689 aaKnown RBP9.16□□□□□ -0.94
NR1I3-209ENST00000428574 LAMP2P13473 410 aa9.16□□□□□ -0.94
NR1I3-209ENST00000428574 PSMC3P17980 439 aa9.16□□□□□ -0.94
NR1I3-209ENST00000428574 NR1D1P20393 614 aa9.16□□□□□ -0.94
NR1I3-209ENST00000428574 NFKBIAP25963 317 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms