RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 CASKIN2Q8WXE0 1202 aa7.18□□□□□ -1.26
CHCHD3P1-201ENST00000425516 P3H4Q92791 437 aa7.18□□□□□ -1.26
CHCHD3P1-201ENST00000425516 HAUS1Q96CS2 278 aa7.18□□□□□ -1.26
CHCHD3P1-201ENST00000425516 NSMCE3Q96MG7 304 aa7.18□□□□□ -1.26
CHCHD3P1-201ENST00000425516 PSKH2Q96QS6 385 aa7.18□□□□□ -1.26
CHCHD3P1-201ENST00000425516 IL12RB2Q99665 862 aa7.18□□□□□ -1.26
CHCHD3P1-201ENST00000425516 NAPGQ99747 312 aaPredicted RBP7.18□□□□□ -1.26
CHCHD3P1-201ENST00000425516 CEP44Q9C0F1 390 aa7.18□□□□□ -1.26
CHCHD3P1-201ENST00000425516 BRD8Q9H0E9 1235 aa7.18□□□□□ -1.26
CHCHD3P1-201ENST00000425516 RUBCNLQ9H714 662 aa7.18□□□□□ -1.26
CHCHD3P1-201ENST00000425516 USP29Q9HBJ7 922 aa7.18□□□□□ -1.26
CHCHD3P1-201ENST00000425516 PRSS16Q9NQE7 514 aa7.18□□□□□ -1.26
CHCHD3P1-201ENST00000425516 LHX3Q9UBR4 397 aa7.18□□□□□ -1.26
CHCHD3P1-201ENST00000425516 UBA2Q9UBT2 640 aaPredicted RBP7.18□□□□□ -1.26
CHCHD3P1-201ENST00000425516 SUN2Q9UH99 717 aa7.18□□□□□ -1.26
CHCHD3P1-201ENST00000425516 SLC25A13Q9UJS0 675 aa7.18□□□□□ -1.26
CHCHD3P1-201ENST00000425516 MYO18AQ92614 2054 aaKnown RBP7.18□□□□□ -1.26
CHCHD3P1-201ENST00000425516 ATG2BQ96BY7 2078 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 EDDM13A0A1B0GTR0 161 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 BCLAF3A2AJT9 711 aaKnown RBP7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 CTAGE9A4FU28 777 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 HACD1B0YJ81 288 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 RNF103O00237 685 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 PPP1R12AO14974 1030 aaPredicted RBP7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 ZNF185O15231 689 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 CEP104O60308 925 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 SIN3BO75182 1162 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 FGGP02679 453 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 EPHX1P07099 455 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 CCNB1P14635 433 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 HOXB2P14652 356 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 TCP1P17987 556 aaKnown RBP7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 CR2P20023 1033 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 HOXA6P31267 233 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 NNMTP40261 264 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 RGRP47804 291 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 CSNK1DP48730 415 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 DGKEP52429 567 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 EIF3EP60228 445 aaKnown RBP7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 ST8SIA6P61647 398 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 IFI35P80217 286 aaPredicted RBP7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 SATB1Q01826 763 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 NSUN2Q08J23 767 aaKnown RBP eCLIP7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 WASHC5Q12768 1159 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 ZBTB17Q13105 803 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 IHHQ14623 411 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 LBRQ14739 615 aaKnown RBP7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 OASLQ15646 514 aaKnown RBP7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 SLC45A4Q5BKX6 768 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 CARD16Q5EG05 197 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 EOGTQ5NDL2 527 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 FAM182AQ5T1J6 154 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 TMCO4Q5TGY1 634 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 MARC1Q5VT66 337 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 ALG1LQ6GMV1 187 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 TIGD7Q6NT04 549 aaPredicted RBP7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 TMEM214Q6NUQ4 689 aaKnown RBP7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 C22orf39Q6P5X5 142 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 SERPINA13PQ6UXR4 307 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 SYT10Q6XYQ8 523 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 DPY19L3Q6ZPD9 716 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 B4GALNT4Q76KP1 1039 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 ADAT2Q7Z6V5 191 aaKnown RBP7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 ZSCAN30Q86W11 494 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 ZNF354CQ86Y25 554 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 CREG2Q8IUH2 290 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 C1orf210Q8IVY1 113 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 CCDC13Q8IYE1 715 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 PGBD5Q8N414 524 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 ATPAF2Q8N5M1 289 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 PCDH20Q8N6Y1 951 aaKnown RBP7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 CNTD1Q8N815 330 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 DTWD2Q8NBA8 298 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 TSEN2Q8NCE0 465 aaKnown RBP7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 CCNYQ8ND76 341 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 TFB1MQ8WVM0 346 aaKnown RBP7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 MAIP1Q8WWC4 291 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 GLMNQ92990 594 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 QKIQ96PU8 341 aaKnown RBP eCLIP7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 FAM118BQ9BPY3 351 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 LRFN3Q9BTN0 628 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 MKRN2Q9H000 416 aaKnown RBP7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 TNKS2Q9H2K2 1166 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 C10orf88Q9H8K7 445 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 SP110Q9HB58 689 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 PRMT8Q9NR22 394 aaPredicted RBP7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 AMACRQ9UHK6 382 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 ATP8A1Q9Y2Q0 1164 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 SAR1BQ9Y6B6 198 aa7.17□□□□□ -1.26
CHCHD3P1-201ENST00000425516 KCNK1O00180 336 aa7.16□□□□□ -1.26
CHCHD3P1-201ENST00000425516 PDE2AO00408 941 aaPredicted RBP7.16□□□□□ -1.26
CHCHD3P1-201ENST00000425516 DLL1O00548 723 aa7.16□□□□□ -1.26
CHCHD3P1-201ENST00000425516 MCF2LO15068 1137 aa7.16□□□□□ -1.26
CHCHD3P1-201ENST00000425516 INSIG1O15503 277 aa7.16□□□□□ -1.26
CHCHD3P1-201ENST00000425516 LIASO43766 372 aa7.16□□□□□ -1.26
CHCHD3P1-201ENST00000425516 GSRP00390 522 aa7.16□□□□□ -1.26
CHCHD3P1-201ENST00000425516 JCHAINP01591 159 aa7.16□□□□□ -1.26
CHCHD3P1-201ENST00000425516 TUBB4AP04350 444 aa7.16□□□□□ -1.26
CHCHD3P1-201ENST00000425516 CTSLP07711 333 aa7.16□□□□□ -1.26
CHCHD3P1-201ENST00000425516 RBP3P10745 1247 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms