RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 SERPINA4P29622 427 aa25.72■■□□□ 1.71
TSPAN3-203ENST00000424443 DHPSP49366 369 aaPredicted RBP25.72■■□□□ 1.71
TSPAN3-203ENST00000424443 MAXP61244 160 aa25.72■■□□□ 1.71
TSPAN3-203ENST00000424443 AP1S1P61966 158 aa25.72■■□□□ 1.71
TSPAN3-203ENST00000424443 FBXL19Q6PCT2 694 aa25.72■■□□□ 1.71
TSPAN3-203ENST00000424443 ERN2Q76MJ5 926 aaKnown RBP25.72■■□□□ 1.71
TSPAN3-203ENST00000424443 TTC13Q8NBP0 860 aa25.72■■□□□ 1.71
TSPAN3-203ENST00000424443 ARRDC3Q96B67 414 aa25.72■■□□□ 1.71
TSPAN3-203ENST00000424443 FERMT1Q9BQL6 677 aa25.72■■□□□ 1.71
TSPAN3-203ENST00000424443 MGME1Q9BQP7 344 aa25.72■■□□□ 1.71
TSPAN3-203ENST00000424443 HERPUD2Q9BSE4 406 aa25.72■■□□□ 1.71
TSPAN3-203ENST00000424443 FAM47DPA6NHR8 397 aa25.71■■□□□ 1.71
TSPAN3-203ENST00000424443 LRRC72A6NJI9 287 aa25.71■■□□□ 1.71
TSPAN3-203ENST00000424443 HACD1B0YJ81 288 aa25.71■■□□□ 1.71
TSPAN3-203ENST00000424443 PROB1E7EW31 1015 aa25.71■■□□□ 1.71
TSPAN3-203ENST00000424443 H7C0C1 242 aa25.71■■□□□ 1.71
TSPAN3-203ENST00000424443 PLK4O00444 970 aa25.71■■□□□ 1.71
TSPAN3-203ENST00000424443 MUSKO15146 869 aa25.71■■□□□ 1.71
TSPAN3-203ENST00000424443 SLC7A4O43246 635 aa25.71■■□□□ 1.71
TSPAN3-203ENST00000424443 JCHAINP01591 159 aa25.71■■□□□ 1.71
TSPAN3-203ENST00000424443 ATP5OP48047 213 aa25.71■■□□□ 1.71
TSPAN3-203ENST00000424443 NEK3P51956 506 aa25.71■■□□□ 1.71
TSPAN3-203ENST00000424443 OTUD4Q01804 1114 aaKnown RBP25.71■■□□□ 1.71
TSPAN3-203ENST00000424443 BCL2L1Q07817 233 aa25.71■■□□□ 1.71
TSPAN3-203ENST00000424443 NOMO1Q15155 1222 aa25.71■■□□□ 1.71
TSPAN3-203ENST00000424443 LAIR1Q6GTX8 287 aa25.71■■□□□ 1.71
TSPAN3-203ENST00000424443 DEFB119Q8N690 84 aa25.71■■□□□ 1.71
TSPAN3-203ENST00000424443 ACTL9Q8TC94 416 aa25.71■■□□□ 1.71
TSPAN3-203ENST00000424443 FOXJ1Q92949 421 aa25.71■■□□□ 1.71
TSPAN3-203ENST00000424443 NUDCD1Q96RS6 583 aa25.71■■□□□ 1.71
TSPAN3-203ENST00000424443 TLR10Q9BXR5 811 aa25.71■■□□□ 1.71
TSPAN3-203ENST00000424443 HDAC8Q9BY41 377 aa25.71■■□□□ 1.71
TSPAN3-203ENST00000424443 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP25.7■■□□□ 1.7
TSPAN3-203ENST00000424443 USP27XA6NNY8 438 aa25.7■■□□□ 1.7
TSPAN3-203ENST00000424443 MTSS1O43312 755 aa25.7■■□□□ 1.7
TSPAN3-203ENST00000424443 PIGNO95427 931 aa25.7■■□□□ 1.7
TSPAN3-203ENST00000424443 IFI35P80217 286 aaPredicted RBP25.7■■□□□ 1.7
TSPAN3-203ENST00000424443 XRCC4Q13426 336 aa25.7■■□□□ 1.7
TSPAN3-203ENST00000424443 RALGPS1Q5JS13 557 aa25.7■■□□□ 1.7
TSPAN3-203ENST00000424443 B4GALNT4Q76KP1 1039 aa25.7■■□□□ 1.7
TSPAN3-203ENST00000424443 SLC35F6Q8N357 371 aa25.7■■□□□ 1.7
TSPAN3-203ENST00000424443 PGBD5Q8N414 524 aa25.7■■□□□ 1.7
TSPAN3-203ENST00000424443 SUMF1Q8NBK3 374 aa25.7■■□□□ 1.7
TSPAN3-203ENST00000424443 ZNF641Q96N77 438 aaPredicted RBP25.7■■□□□ 1.7
TSPAN3-203ENST00000424443 SUV39H2Q9H5I1 410 aa25.7■■□□□ 1.7
TSPAN3-203ENST00000424443 GMEB2Q9UKD1 530 aa25.7■■□□□ 1.7
TSPAN3-203ENST00000424443 THADAQ6YHU6 1953 aa25.7■■□□□ 1.7
TSPAN3-203ENST00000424443 C16orf96A6NNT2 1141 aa25.69■■□□□ 1.7
TSPAN3-203ENST00000424443 ENC1O14682 589 aa25.69■■□□□ 1.7
TSPAN3-203ENST00000424443 EIF3EP60228 445 aaKnown RBP25.69■■□□□ 1.7
TSPAN3-203ENST00000424443 PRKD1Q15139 912 aaPredicted RBP25.69■■□□□ 1.7
TSPAN3-203ENST00000424443 SYCP2LQ5T4T6 812 aa25.69■■□□□ 1.7
TSPAN3-203ENST00000424443 AGBL4Q5VU57 503 aa25.69■■□□□ 1.7
TSPAN3-203ENST00000424443 ARMCX6Q7L4S7 300 aa25.69■■□□□ 1.7
TSPAN3-203ENST00000424443 CADM4Q8NFZ8 388 aa25.69■■□□□ 1.7
TSPAN3-203ENST00000424443 OR2T34Q8NGX1 318 aa25.69■■□□□ 1.7
TSPAN3-203ENST00000424443 PHOX2BQ99453 314 aa25.69■■□□□ 1.7
TSPAN3-203ENST00000424443 SPAG17Q6Q759 2223 aa25.69■■□□□ 1.7
TSPAN3-203ENST00000424443 TBC1D3DA0A087WVF3 549 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 TBC1D3IA0A087WXS9 549 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 TBC1D3EA0A087X179 549 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 TBC1D3KA0A087X1G2 549 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 TBC1D3FA6NER0 549 aaPredicted RBP25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 MEI4A8MW99 385 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 TBC1D3LB9A6J9 549 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 RNF103O00237 685 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 TBC1D3HP0C7X1 549 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 XPAP23025 273 aaPredicted RBP25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 CES1P23141 567 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 ADPRHP54922 357 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 LYSMD4Q5XG99 296 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 TBC1D3GQ6DHY5 549 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 TBC1D3CQ6IPX1 549 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 PARS2Q7L3T8 475 aaKnown RBP25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 CAMK1DQ8IU85 385 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 TBC1D3Q8IZP1 549 aaPredicted RBP25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 ABCA7Q8IZY2 2146 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 LOXL4Q96JB6 756 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 HSPA12BQ96MM6 686 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 QKIQ96PU8 341 aaKnown RBP eCLIP25.68■■□□□ 1.73e-6■□□□□ 10.1
TSPAN3-203ENST00000424443 IL12RB2Q99665 862 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 SEMA3CQ99985 751 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 PCED1AQ9H1Q7 454 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 KDM4CQ9H3R0 1056 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 NCDNQ9UBB6 729 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 TTC24A2A3L6 582 aaPredicted RBP25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 PRR23AA6NEV1 266 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 HLA-DQB2P05538 268 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 ADRB3P13945 408 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 ZBTB17Q13105 803 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 SLC45A4Q5BKX6 768 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 PIP5KL1Q5T9C9 394 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 NCEH1Q6PIU2 408 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 TTC7BQ86TV6 843 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 CDKL3Q8IVW4 592 aaPredicted RBP25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 RGL4Q8IZJ4 473 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 HCAR2Q8TDS4 363 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 NOD2Q9HC29 1040 aa25.68■■□□□ 1.7
TSPAN3-203ENST00000424443 PLRG1O43660 514 aaKnown RBP25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms