RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 NUDT5Q9UKK9 219 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 PPT2Q9UMR5 302 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 SLC27A5Q9Y2P5 690 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 RAXQ9Y2V3 346 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 FHOD1Q9Y613 1164 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 NCOR1O75376 2440 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 TK2O00142 265 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 NRP1O14786 923 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 FSCN2O14926 492 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 GFPT2O94808 682 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 CD40LGP29965 261 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 SLC6A4P31645 630 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 CCKBRP32239 447 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 CARSP49589 748 aaKnown RBP3.59□□□□□ -1.83
TOP2A-201ENST00000423485 EEFSECP57772 596 aaKnown RBP3.59□□□□□ -1.83
TOP2A-201ENST00000423485 MRPS25P82663 173 aaKnown RBP3.59□□□□□ -1.83
TOP2A-201ENST00000423485 CYP24A1Q07973 514 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 ZNF543Q08ER8 600 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 ILKQ13418 452 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 LAPTM5Q13571 262 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 NCOA4Q13772 614 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 TLR1Q15399 786 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 CLEC16AQ2KHT3 1053 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 MINDY4Q4G0A6 757 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 EARS2Q5JPH6 523 aaKnown RBP3.59□□□□□ -1.83
TOP2A-201ENST00000423485 N4BP2L1Q5TBK1 243 aaPredicted RBP3.59□□□□□ -1.83
TOP2A-201ENST00000423485 OTOAQ7RTW8 1153 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 SLC44A2Q8IWA5 706 aaPredicted RBP3.59□□□□□ -1.83
TOP2A-201ENST00000423485 ZNF454Q8N9F8 522 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 TMEM158Q8WZ71 300 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 TOP1MTQ969P6 601 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 AZIN2Q96A70 460 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 ELSPBP1Q96BH3 223 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 CRELD1Q96HD1 420 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 DYDC2Q96IM9 177 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 EPB41L1Q9H4G0 881 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 C3orf14Q9HBI5 128 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 LRTM1Q9HBL6 345 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 TIMMDC1Q9NPL8 285 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 TIGARQ9NQ88 270 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 KRT82Q9NSB4 513 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 ZNF355PQ9NSJ1 428 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 ASNSD1Q9NWL6 643 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 PLXNA4Q9HCM2 1894 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 VWA3AA6NCI4 1184 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 TMEM150CB9EJG8 249 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 MAP3K6O95382 1288 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 IL33O95760 270 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 MYZAPP0CAP1 466 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 KCNA3P22001 575 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 CYP4F8P98187 520 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 ALDH6A1Q02252 535 aaKnown RBP3.59□□□□□ -1.83
TOP2A-201ENST00000423485 BMPR2Q13873 1038 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 PRKD1Q15139 912 aaPredicted RBP3.59□□□□□ -1.83
TOP2A-201ENST00000423485 EML3Q32P44 896 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 AARS2Q5JTZ9 985 aaKnown RBP3.59□□□□□ -1.83
TOP2A-201ENST00000423485 MORN1Q5T089 497 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 OTUD3Q5T2D3 398 aaPredicted RBP3.59□□□□□ -1.83
TOP2A-201ENST00000423485 LGSNQ5TDP6 509 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 HES3Q5TGS1 186 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 CACHD1Q5VU97 1274 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 SCARA3Q6AZY7 606 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 REP15Q6BDI9 236 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 PTRHD1Q6GMV3 140 aaKnown RBP3.59□□□□□ -1.83
TOP2A-201ENST00000423485 TIGD7Q6NT04 549 aaPredicted RBP3.59□□□□□ -1.83
TOP2A-201ENST00000423485 NIPAL1Q6NVV3 410 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 DHRS13Q6UX07 377 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 RFX6Q8HWS3 928 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 COPS5Q92905 334 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 MUCL1Q96DR8 90 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 NANSQ9NR45 359 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 MARCH2Q9P0N8 246 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 LRFN1Q9P244 771 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 STK17AQ9UEE5 414 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 VTI1BQ9UEU0 232 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 VPS9D1Q9Y2B5 631 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 PCDHGB6Q9Y5F9 930 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 INSL5Q9Y5Q6 135 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 OTOFQ9HC10 1997 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 H3BNH8 94 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 OR10H2O60403 315 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 RECQL4O94761 1208 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 UBXN7O94888 489 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 PFKLP17858 780 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 MZF1P28698 734 aaPredicted RBP3.59□□□□□ -1.83
TOP2A-201ENST00000423485 ALDH3A1P30838 453 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 VCPP55072 806 aaKnown RBP3.59□□□□□ -1.83
TOP2A-201ENST00000423485 EEF1A1P68104 462 aaKnown RBP3.59□□□□□ -1.83
TOP2A-201ENST00000423485 EEF1A2Q05639 463 aaKnown RBP3.59□□□□□ -1.83
TOP2A-201ENST00000423485 LRMPQ12912 555 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 MRPL49Q13405 166 aaKnown RBP3.59□□□□□ -1.83
TOP2A-201ENST00000423485 SERINC3Q13530 473 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 VEZF1Q14119 521 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 GNA13Q14344 377 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 EEF1A1P5Q5VTE0 462 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 KLHL17Q6TDP4 642 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 DYMQ7RTS9 669 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 SH3RF1Q7Z6J0 888 aa3.59□□□□□ -1.83
TOP2A-201ENST00000423485 SETD3Q86TU7 594 aaPredicted RBP3.59□□□□□ -1.83
TOP2A-201ENST00000423485 PACS2Q86VP3 889 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms