RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 TAF4O00268 1085 aa15.42■□□□□ 0.06
USB1-202ENST00000423271 DDX3XO00571 662 aaKnown RBP eCLIP15.42■□□□□ 0.062e-15■■■■■ 27.4
USB1-202ENST00000423271 RAD51BO15315 384 aa15.42■□□□□ 0.06
USB1-202ENST00000423271 RASA4O43374 803 aa15.42■□□□□ 0.06
USB1-202ENST00000423271 LDOC1O95751 146 aaPredicted RBP15.42■□□□□ 0.06
USB1-202ENST00000423271 AIF1P55008 147 aa15.42■□□□□ 0.06
USB1-202ENST00000423271 CLDN6P56747 220 aa15.42■□□□□ 0.06
USB1-202ENST00000423271 SNRPD1P62314 119 aaKnown RBP15.42■□□□□ 0.06
USB1-202ENST00000423271 LRRC73Q5JTD7 316 aa15.42■□□□□ 0.06
USB1-202ENST00000423271 HGSNATQ68CP4 663 aa15.42■□□□□ 0.06
USB1-202ENST00000423271 SLC22A18ASQ8N1D0 253 aa15.42■□□□□ 0.06
USB1-202ENST00000423271 VCPIP1Q96JH7 1222 aa15.42■□□□□ 0.06
USB1-202ENST00000423271 CALN1Q9BXU9 219 aa15.42■□□□□ 0.06
USB1-202ENST00000423271 PARVAQ9NVD7 372 aa15.42■□□□□ 0.06
USB1-202ENST00000423271 AP4E1Q9UPM8 1137 aa15.42■□□□□ 0.06
USB1-202ENST00000423271 FAM208BQ5VWN6 2430 aa15.42■□□□□ 0.06
USB1-202ENST00000423271 KNTC1P50748 2209 aa15.41■□□□□ 0.06
USB1-202ENST00000423271 DSPP15924 2871 aaKnown RBP15.41■□□□□ 0.06
USB1-202ENST00000423271 ZSCAN5CA6NGD5 496 aaPredicted RBP15.41■□□□□ 0.06
USB1-202ENST00000423271 AP1G1O43747 822 aa15.41■□□□□ 0.06
USB1-202ENST00000423271 ACADVLP49748 655 aa15.41■□□□□ 0.06
USB1-202ENST00000423271 TPI1P60174 286 aa15.41■□□□□ 0.06
USB1-202ENST00000423271 RPS21P63220 83 aaKnown RBP15.41■□□□□ 0.06
USB1-202ENST00000423271 SERINC3Q13530 473 aa15.41■□□□□ 0.06
USB1-202ENST00000423271 MYLK3Q32MK0 819 aa15.41■□□□□ 0.06
USB1-202ENST00000423271 TDRD12Q587J7 1177 aaKnown RBP15.41■□□□□ 0.06
USB1-202ENST00000423271 ZNF805Q5CZA5 627 aa15.41■□□□□ 0.06
USB1-202ENST00000423271 KIAA1161Q6NSJ0 714 aa15.41■□□□□ 0.06
USB1-202ENST00000423271 PPP1R2P3Q6NXS1 205 aa15.41■□□□□ 0.06
USB1-202ENST00000423271 KDM7AQ6ZMT4 941 aa15.41■□□□□ 0.06
USB1-202ENST00000423271 ABI3BPQ7Z7G0 1075 aa15.41■□□□□ 0.06
USB1-202ENST00000423271 UMODL1-AS1Q8N2C9 162 aa15.41■□□□□ 0.06
USB1-202ENST00000423271 ZNF653Q96CK0 615 aa15.41■□□□□ 0.06
USB1-202ENST00000423271 LRIG1Q96JA1 1093 aa15.41■□□□□ 0.06
USB1-202ENST00000423271 EXOC2Q96KP1 924 aa15.41■□□□□ 0.06
USB1-202ENST00000423271 GDAP1L1Q96MZ0 367 aa15.41■□□□□ 0.06
USB1-202ENST00000423271 KLHL32Q96NJ5 620 aa15.41■□□□□ 0.06
USB1-202ENST00000423271 SNRNP25Q9BV90 132 aaKnown RBP15.41■□□□□ 0.06
USB1-202ENST00000423271 SLC17A9Q9BYT1 436 aa15.41■□□□□ 0.06
USB1-202ENST00000423271 CATSPERBQ9H7T0 1116 aa15.41■□□□□ 0.06
USB1-202ENST00000423271 CNOT8Q9UFF9 292 aaKnown RBP15.41■□□□□ 0.06
USB1-202ENST00000423271 PCSK1NQ9UHG2 260 aa15.41■□□□□ 0.06
USB1-202ENST00000423271 RALYQ9UKM9 306 aaKnown RBP15.41■□□□□ 0.06
USB1-202ENST00000423271 POM121BA6NF01 834 aa15.4■□□□□ 0.06
USB1-202ENST00000423271 TMEM191CA6NGB0 347 aa15.4■□□□□ 0.06
USB1-202ENST00000423271 IGLON5A6NGN9 336 aa15.4■□□□□ 0.06
USB1-202ENST00000423271 INSIG1O15503 277 aa15.4■□□□□ 0.06
USB1-202ENST00000423271 FGF10O15520 208 aaPredicted RBP15.4■□□□□ 0.06
USB1-202ENST00000423271 POP4O95707 220 aaKnown RBP15.4■□□□□ 0.06
USB1-202ENST00000423271 PAK4O96013 591 aaPredicted RBP15.4■□□□□ 0.06
USB1-202ENST00000423271 FTLP02792 175 aaPredicted RBP15.4■□□□□ 0.06
USB1-202ENST00000423271 SERPING1P05155 500 aa15.4■□□□□ 0.06
USB1-202ENST00000423271 TPM1P09493 284 aa15.4■□□□□ 0.06
USB1-202ENST00000423271 DESP17661 470 aa15.4■□□□□ 0.06
USB1-202ENST00000423271 YBEYP58557 167 aaPredicted RBP15.4■□□□□ 0.06
USB1-202ENST00000423271 RHOAP61586 193 aa15.4■□□□□ 0.06
USB1-202ENST00000423271 TBX2Q13207 712 aaPredicted RBP15.4■□□□□ 0.06
USB1-202ENST00000423271 SMAD1Q15797 465 aaKnown RBP15.4■□□□□ 0.06
USB1-202ENST00000423271 PARP15Q460N3 678 aa15.4■□□□□ 0.06
USB1-202ENST00000423271 CYP4V2Q6ZWL3 525 aaPredicted RBP15.4■□□□□ 0.06
USB1-202ENST00000423271 PTAR1Q7Z6K3 402 aaPredicted RBP15.4■□□□□ 0.06
USB1-202ENST00000423271 SLC25A45Q8N413 288 aa15.4■□□□□ 0.06
USB1-202ENST00000423271 MDM1Q8TC05 714 aa15.4■□□□□ 0.06
USB1-202ENST00000423271 MRFAP1L1Q96HT8 127 aa15.4■□□□□ 0.06
USB1-202ENST00000423271 CELF6Q96J87 481 aaKnown RBP15.4■□□□□ 0.06
USB1-202ENST00000423271 FEM1CQ96JP0 617 aa15.4■□□□□ 0.06
USB1-202ENST00000423271 BMFQ96LC9 184 aa15.4■□□□□ 0.06
USB1-202ENST00000423271 KCTD15Q96SI1 283 aaPredicted RBP15.4■□□□□ 0.06
USB1-202ENST00000423271 DNAJC7Q99615 494 aa15.4■□□□□ 0.06
USB1-202ENST00000423271 DHX35Q9H5Z1 703 aaKnown RBP15.4■□□□□ 0.06
USB1-202ENST00000423271 LRRC19Q9H756 370 aa15.4■□□□□ 0.06
USB1-202ENST00000423271 KLHL11Q9NVR0 708 aa15.4■□□□□ 0.06
USB1-202ENST00000423271 UCKL1Q9NWZ5 548 aa15.4■□□□□ 0.06
USB1-202ENST00000423271 LHX3Q9UBR4 397 aa15.4■□□□□ 0.06
USB1-202ENST00000423271 A6NNZ2 444 aa15.39■□□□□ 0.05
USB1-202ENST00000423271 EEF2KO00418 725 aaKnown RBP15.39■□□□□ 0.05
USB1-202ENST00000423271 TRIM38O00635 465 aa15.39■□□□□ 0.05
USB1-202ENST00000423271 MFAP3LO75121 409 aa15.39■□□□□ 0.05
USB1-202ENST00000423271 RFPL3O75679 317 aa15.39■□□□□ 0.05
USB1-202ENST00000423271 IGSF6O95976 241 aa15.39■□□□□ 0.05
USB1-202ENST00000423271 GZMAP12544 262 aa15.39■□□□□ 0.05
USB1-202ENST00000423271 ITIH2P19823 946 aa15.39■□□□□ 0.05
USB1-202ENST00000423271 HNRNPH3P31942 346 aaKnown RBP15.39■□□□□ 0.05
USB1-202ENST00000423271 ADKP55263 362 aaKnown RBP15.39■□□□□ 0.05
USB1-202ENST00000423271 CYTH1Q15438 398 aa15.39■□□□□ 0.05
USB1-202ENST00000423271 INO80DQ53TQ3 878 aaPredicted RBP15.39■□□□□ 0.05
USB1-202ENST00000423271 ZNF542PQ5EBM4 170 aa15.39■□□□□ 0.05
USB1-202ENST00000423271 GDPD4Q6W3E5 623 aa15.39■□□□□ 0.05
USB1-202ENST00000423271 KYAT3Q6YP21 454 aaKnown RBP15.39■□□□□ 0.05
USB1-202ENST00000423271 Q6ZSR6 202 aa15.39■□□□□ 0.05
USB1-202ENST00000423271 PROSER1Q86XN7 944 aa15.39■□□□□ 0.05
USB1-202ENST00000423271 GALNT15Q8N3T1 639 aa15.39■□□□□ 0.05
USB1-202ENST00000423271 OR8K1Q8NGG5 319 aa15.39■□□□□ 0.05
USB1-202ENST00000423271 CASKIN2Q8WXE0 1202 aa15.39■□□□□ 0.05
USB1-202ENST00000423271 TSC1Q92574 1164 aa15.39■□□□□ 0.05
USB1-202ENST00000423271 RAB7BQ96AH8 199 aa15.39■□□□□ 0.05
USB1-202ENST00000423271 KLF6Q99612 283 aaPredicted RBP15.39■□□□□ 0.05
USB1-202ENST00000423271 C1QTNF2Q9BXJ5 285 aa15.39■□□□□ 0.05
USB1-202ENST00000423271 OSBPL1AQ9BXW6 950 aa15.39■□□□□ 0.05
USB1-202ENST00000423271 PDFQ9HBH1 243 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms