RNA–Protein interactions for RNA: ENST00000422906.6

UBE2W-202, Transcript of ubiquitin conjugating enzyme E2 W, humanhuman

TSL 1 (best)

Gene UBE2W, Length 3,903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2W-202ENST00000422906 WDR3Q9UNX4 943 aaKnown RBP eCLIP1.87□□□□□ -2.11
UBE2W-202ENST00000422906 EP300Q09472 2414 aaPredicted RBP1.87□□□□□ -2.11
UBE2W-202ENST00000422906 TLCD2A6NGC4 264 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 B4DXG7 233 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 MSTNO14793 375 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 TIMM44O43615 452 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 KLRC4O43908 158 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 SORBS3O60504 671 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 FZD7O75084 574 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 VAV1P15498 845 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 CDH5P33151 784 aaPredicted RBP1.87□□□□□ -2.11
UBE2W-202ENST00000422906 IRAK1P51617 712 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 CASP5P51878 434 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 SMTNP53814 917 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 DLX5P56178 289 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 GUCA2AQ02747 115 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 MTA1Q13330 715 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 ARHGAP44Q17R89 818 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 DEFB113Q30KQ7 82 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 IFIT1BQ5T764 474 aaKnown RBP1.87□□□□□ -2.11
UBE2W-202ENST00000422906 ITIH5Q86UX2 942 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 SATL1Q86VE3 508 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 PLA2G4DQ86XP0 818 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 ARL10Q8N8L6 244 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 KYQ8NBH2 561 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 SLC38A9Q8NBW4 561 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 RNF149Q8NC42 400 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 SENP8Q96LD8 212 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 TEFMQ96QE5 360 aaKnown RBP1.87□□□□□ -2.11
UBE2W-202ENST00000422906 CCSER2Q9H7U1 834 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 THG1LQ9NWX6 298 aaKnown RBP1.87□□□□□ -2.11
UBE2W-202ENST00000422906 ITGA11Q9UKX5 1188 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 RNF215Q9Y6U7 377 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 GAPDHSO14556 408 aaPredicted RBP1.87□□□□□ -2.11
UBE2W-202ENST00000422906 NHLRC4P0CG21 123 aaPredicted RBP1.87□□□□□ -2.11
UBE2W-202ENST00000422906 FAM157BP0CG42 384 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 TYRP14679 529 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 MAP4P27816 1152 aaKnown RBP1.87□□□□□ -2.11
UBE2W-202ENST00000422906 CD70P32970 193 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 CSNK1DP48730 415 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 PEX5P50542 639 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 SMSP52788 366 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 EFNA5P52803 228 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 DMPKQ09013 629 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 CHAF1BQ13112 559 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 ETFDHQ16134 617 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 CEP135Q66GS9 1140 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 RTL6Q6ICC9 239 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 FBXO42Q6P3S6 717 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 C12orf54Q6X4T0 127 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 MACC1Q6ZN28 852 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 BPHLQ86WA6 291 aaPredicted RBP1.87□□□□□ -2.11
UBE2W-202ENST00000422906 CARFQ8N187 725 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 GRIN3AQ8TCU5 1115 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 LMX1AQ8TE12 382 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 TBCKQ8TEA7 893 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 PIGKQ92643 395 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 CENPIQ92674 756 aaPredicted RBP1.87□□□□□ -2.11
UBE2W-202ENST00000422906 PLD4Q96BZ4 506 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 REPS1Q96D71 796 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 C19orf60Q96EN9 201 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 C19orf43Q9BQ61 176 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 JPH2Q9BR39 696 aaPredicted RBP1.87□□□□□ -2.11
UBE2W-202ENST00000422906 RAB11FIP5Q9BXF6 653 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 PITPNM3Q9BZ71 974 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 CPEB1Q9BZB8 566 aaKnown RBP1.87□□□□□ -2.11
UBE2W-202ENST00000422906 APOBEC3GQ9HC16 384 aaKnown RBP1.87□□□□□ -2.11
UBE2W-202ENST00000422906 TMEM9Q9P0T7 183 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 UXTQ9UBK9 157 aaPredicted RBP1.87□□□□□ -2.11
UBE2W-202ENST00000422906 EPHA6Q9UF33 1036 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 TLK1Q9UKI8 766 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 MMP24Q9Y5R2 645 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 RAD54BQ9Y620 910 aa1.87□□□□□ -2.11
UBE2W-202ENST00000422906 MINDY4BA8MYZ0 360 aa1.86□□□□□ -2.11
UBE2W-202ENST00000422906 ATP2C2O75185 946 aa1.86□□□□□ -2.11
UBE2W-202ENST00000422906 DNAJB5O75953 348 aa1.86□□□□□ -2.11
UBE2W-202ENST00000422906 GLSO94925 669 aaPredicted RBP1.86□□□□□ -2.11
UBE2W-202ENST00000422906 EML2O95834 649 aa1.86□□□□□ -2.11
UBE2W-202ENST00000422906 MPOP05164 745 aa1.86□□□□□ -2.11
UBE2W-202ENST00000422906 CYP2F1P24903 491 aa1.86□□□□□ -2.11
UBE2W-202ENST00000422906 CD38P28907 300 aa1.86□□□□□ -2.11
UBE2W-202ENST00000422906 SOX18P35713 384 aa1.86□□□□□ -2.11
UBE2W-202ENST00000422906 CTSOP43234 321 aaPredicted RBP1.86□□□□□ -2.11
UBE2W-202ENST00000422906 GABRB2P47870 512 aa1.86□□□□□ -2.11
UBE2W-202ENST00000422906 DHPSP49366 369 aaPredicted RBP1.86□□□□□ -2.11
UBE2W-202ENST00000422906 TUFMP49411 452 aaKnown RBP1.86□□□□□ -2.11
UBE2W-202ENST00000422906 CSNK1EP49674 416 aaKnown RBP1.86□□□□□ -2.11
UBE2W-202ENST00000422906 KIF11P52732 1056 aa1.86□□□□□ -2.11
UBE2W-202ENST00000422906 DHX9Q08211 1270 aaKnown RBP1.86□□□□□ -2.11
UBE2W-202ENST00000422906 KYAT1Q16773 422 aa1.86□□□□□ -2.11
UBE2W-202ENST00000422906 ATP11CQ8NB49 1132 aa1.86□□□□□ -2.11
UBE2W-202ENST00000422906 RHBDD1Q8TEB9 315 aa1.86□□□□□ -2.11
UBE2W-202ENST00000422906 SNRNP40Q96DI7 357 aaKnown RBP1.86□□□□□ -2.11
UBE2W-202ENST00000422906 CCDC136Q96JN2 1154 aa1.86□□□□□ -2.11
UBE2W-202ENST00000422906 MCCC1Q96RQ3 725 aaPredicted RBP1.86□□□□□ -2.11
UBE2W-202ENST00000422906 MRPL45Q9BRJ2 306 aaKnown RBP1.86□□□□□ -2.11
UBE2W-202ENST00000422906 TEKT3Q9BXF9 490 aa1.86□□□□□ -2.11
UBE2W-202ENST00000422906 KAT14Q9H8E8 782 aa1.86□□□□□ -2.11
UBE2W-202ENST00000422906 USP25Q9UHP3 1055 aa1.86□□□□□ -2.11
UBE2W-202ENST00000422906 STX8Q9UNK0 236 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms