RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 NSUN2Q08J23 767 aaKnown RBP eCLIP9.4□□□□□ -0.9
PDGFC-202ENST00000422544 ZBTB17Q13105 803 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 XRCC4Q13426 336 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 PRKD1Q15139 912 aaPredicted RBP9.4□□□□□ -0.9
PDGFC-202ENST00000422544 MAP7D1Q3KQU3 841 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 USP39Q53GS9 565 aaKnown RBP9.4□□□□□ -0.9
PDGFC-202ENST00000422544 FAM46CQ5VWP2 391 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 SRLQ86TD4 932 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 FAM124AQ86V42 546 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 BBS5Q8N3I7 341 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 HDDC3Q8N4P3 179 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.4□□□□□ -0.9
PDGFC-202ENST00000422544 FAM160A2Q8N612 972 aaPredicted RBP9.4□□□□□ -0.9
PDGFC-202ENST00000422544 TMIEQ8NEW7 156 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 GANCQ8TET4 914 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 FATE1Q969F0 183 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 VOPP1Q96AW1 172 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 MS4A14Q96JA4 679 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 PBKQ96KB5 322 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 CNTNAP3BQ96NU0 1288 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 CEP41Q9BYV8 373 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 CNTNAP3Q9BZ76 1288 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 PABPC3Q9H361 631 aaKnown RBP9.4□□□□□ -0.9
PDGFC-202ENST00000422544 ZDHHC6Q9H6R6 413 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 NT5MQ9NPB1 228 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 FBXL12Q9NXK8 326 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 CYP8B1Q9UNU6 501 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 WASF2Q9Y6W5 498 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 R4GN57 208 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 DMXL2Q8TDJ6 3036 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 SETXQ7Z333 2677 aaKnown RBP9.39□□□□□ -0.91
PDGFC-202ENST00000422544 A0A1W2PP55 124 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 HACD1B0YJ81 288 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 C1QTNF3-AMACRE9PGA6 284 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 ZNF217O75362 1048 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 RNASEH2AO75792 299 aaKnown RBP9.39□□□□□ -0.91
PDGFC-202ENST00000422544 RPP40O75818 363 aaKnown RBP9.39□□□□□ -0.91
PDGFC-202ENST00000422544 PIGNO95427 931 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 ADH1BP00325 375 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 FGGP02679 453 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 PRNPP04156 253 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 HLA-DQB2P05538 268 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 RBP3P10745 1247 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 RBL1P28749 1068 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 HSPA9P38646 679 aaKnown RBP9.39□□□□□ -0.91
PDGFC-202ENST00000422544 P2RY2P41231 377 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 CSNK1DP48730 415 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 IFI35P80217 286 aaPredicted RBP9.39□□□□□ -0.91
PDGFC-202ENST00000422544 RAD51Q06609 339 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 LONRF2Q1L5Z9 754 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 SLC45A4Q5BKX6 768 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 DARS2Q6PI48 645 aaKnown RBP9.39□□□□□ -0.91
PDGFC-202ENST00000422544 NCEH1Q6PIU2 408 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 GDPD4Q6W3E5 623 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 CAMK1DQ8IU85 385 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 AADATQ8N5Z0 425 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 CNTD1Q8N815 330 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 TTC13Q8NBP0 860 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 ZBTB44Q8NCP5 570 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 COG1Q8WTW3 980 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 HTR3CQ8WXA8 447 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 ATG4AQ8WYN0 398 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 ARRDC3Q96B67 414 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 NSMCE3Q96MG7 304 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 AGAP3Q96P47 875 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 QKIQ96PU8 341 aaKnown RBP eCLIP9.39□□□□□ -0.912e-6■■■■□ 20.3
PDGFC-202ENST00000422544 OSBPL9Q96SU4 736 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 IL12RB2Q99665 862 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 OMDQ99983 421 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 SEMA3CQ99985 751 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 MGME1Q9BQP7 344 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 NEUROG2Q9H2A3 272 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 NOD2Q9HC29 1040 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 SCUBE2Q9NQ36 999 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 USP36Q9P275 1121 aaKnown RBP9.39□□□□□ -0.91
PDGFC-202ENST00000422544 SERGEFQ9UGK8 458 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 MBD1Q9UIS9 605 aaPredicted RBP9.39□□□□□ -0.91
PDGFC-202ENST00000422544 SNX12Q9UMY4 172 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 SCML1Q9UN30 329 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 NCKAP1Q9Y2A7 1128 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 ZKSCAN5Q9Y2L8 839 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 TTLL3Q9Y4R7 772 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 PCDHGA2Q9Y5H1 932 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 CHD5Q8TDI0 1954 aa9.39□□□□□ -0.91
PDGFC-202ENST00000422544 LAMA5O15230 3695 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 MUC22E2RYF6 1773 aaPredicted RBP9.38□□□□□ -0.91
PDGFC-202ENST00000422544 IGHV1OR15-9A0A0B4J2B8 117 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 CTAGE9A4FU28 777 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 RIOK3O14730 519 aaKnown RBP9.38□□□□□ -0.91
PDGFC-202ENST00000422544 ZNF185O15231 689 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 FANCGO15287 622 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 LILRB5O75023 590 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 UGT2B4P06133 528 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 CR2P20023 1033 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 BCKDHBP21953 392 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 PTPN3P26045 913 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 CD6P30203 668 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 OXTRP30559 389 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 CNR2P34972 360 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 DRD3P35462 400 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms