RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 PHTF1Q9UMS5 762 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 GIT1Q9Y2X7 761 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 NOSIPQ9Y314 301 aaKnown RBP5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 IPPQ9Y573 584 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 PDZD2O15018 2839 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 HIVEP1P15822 2718 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 MYH6P13533 1939 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 A0A1W2PQ27 194 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 A0A1W2PQ64 194 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 A0A1W2PQC6 194 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 CASTOR2A6NHX0 329 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 LRRIQ3A6PVS8 624 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 LAD1O00515 517 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 RNF113AO15541 343 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 HNRNPRO43390 633 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 PSPNO60542 156 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 MTA2O94776 668 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 FGF19O95750 216 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 CCNE2O96020 404 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 MT-CO1P00395 513 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 LTFP02788 710 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 EIF2S1P05198 315 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 ZFYP08048 801 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 GSTA2P09210 222 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 GLI4P10075 376 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 ALOX15P16050 662 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 GABRG2P18507 467 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 FUT4P22083 530 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 ENPP1P22413 925 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 PTX3P26022 381 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 ALDH3A1P30838 453 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 KRT9P35527 623 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 SLC6A11P48066 632 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 SERPINB8P50452 374 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 ZNF75DP51815 510 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 KIF11P52732 1056 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 ARPP19P56211 112 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 UBE2HP62256 183 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 AKAP17AQ02040 695 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 CYP4A11Q02928 519 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 ACTN3Q08043 901 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 ST3GAL1Q11201 340 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 TUSC3Q13454 348 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 CLCA4Q14CN2 919 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 SPCS2Q15005 226 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 NR0B2Q15466 257 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 ZNF174Q15697 407 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 WHAMMP3Q1A5X7 153 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 VPS53Q5VIR6 699 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 STEAP3Q658P3 488 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 NCAPH2Q6IBW4 605 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 SWSAP1Q6NVH7 229 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 TIPARPQ7Z3E1 657 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 DGKHQ86XP1 1220 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 SPPL2CQ8IUH8 684 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 PASD1Q8IV76 773 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 HACE1Q8IYU2 909 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 C1orf131Q8NDD1 294 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 MAIP1Q8WWC4 291 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 DNASE2BQ8WZ79 361 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 IGSF8Q969P0 613 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 BPIFA3Q9BQP9 254 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 CCDC68Q9H2F9 335 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 SYNCQ9H7C4 482 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 ECT2Q9H8V3 914 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 VCX3AQ9NNX9 186 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 DMAP1Q9NPF5 467 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 KCNH7Q9NS40 1196 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 TOPORSQ9NS56 1045 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 C14orf119Q9NWQ9 140 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 VPS18Q9P253 973 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 GABBR1Q9UBS5 961 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 C15orf41Q9Y2V0 281 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 SH3GLB1Q9Y371 365 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 LUC7L2Q9Y383 392 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 MRFAP1Q9Y605 127 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 BZW2Q9Y6E2 419 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 CAPN7Q9Y6W3 813 aa5.7□□□□□ -1.5
ECHDC1-206ENST00000417628 BOD1L1Q8NFC6 3051 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 EVPLQ92817 2033 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 FITM1A5D6W6 292 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 ANTXRLA6NF34 631 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 FAM90A27PA6NNH2 459 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 TTC34A8MYJ7 566 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 DDX39AO00148 427 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 BIN1O00499 593 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 KRIT1O00522 736 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 PAPSS1O43252 624 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 MTSS1O43312 755 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 PRPF3O43395 683 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 VPS4BO75351 444 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 PEX14O75381 377 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 PRPF6O94906 941 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 MT-CO3P00414 261 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 HPXP02790 462 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 PRKCGP05129 697 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 KRT7P08729 469 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 POLR2EP19388 210 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 GNLYP22749 145 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 S100A1P23297 94 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms