RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.34■□□□□ 0.53
VCP-202ENST00000417448 CCDC81Q6ZN84 652 aa18.34■□□□□ 0.53
VCP-202ENST00000417448 ARCQ7LC44 396 aa18.34■□□□□ 0.53
VCP-202ENST00000417448 PRPF39Q86UA1 669 aaKnown RBP18.34■□□□□ 0.53
VCP-202ENST00000417448 CARNMT1Q8N4J0 409 aa18.34■□□□□ 0.53
VCP-202ENST00000417448 CCDC185Q8N715 623 aa18.34■□□□□ 0.53
VCP-202ENST00000417448 PTPRN2Q92932 1015 aa18.34■□□□□ 0.53
VCP-202ENST00000417448 PGAP3Q96FM1 320 aaPredicted RBP18.34■□□□□ 0.53
VCP-202ENST00000417448 APOLD1Q96LR9 279 aa18.34■□□□□ 0.53
VCP-202ENST00000417448 SLC46A1Q96NT5 459 aa18.34■□□□□ 0.53
VCP-202ENST00000417448 PARVAQ9NVD7 372 aa18.34■□□□□ 0.53
VCP-202ENST00000417448 ARHGEF38Q9NXL2 777 aa18.34■□□□□ 0.53
VCP-202ENST00000417448 VANGL2Q9ULK5 521 aa18.34■□□□□ 0.53
VCP-202ENST00000417448 HEMK1Q9Y5R4 338 aaPredicted RBP18.34■□□□□ 0.53
VCP-202ENST00000417448 RP1P56715 2156 aa18.33■□□□□ 0.52
VCP-202ENST00000417448 TMEM191CA6NGB0 347 aa18.33■□□□□ 0.52
VCP-202ENST00000417448 LZTS3O60299 673 aaPredicted RBP18.33■□□□□ 0.52
VCP-202ENST00000417448 MAGEC1O60732 1142 aa18.33■□□□□ 0.52
VCP-202ENST00000417448 F9P00740 461 aa18.33■□□□□ 0.52
VCP-202ENST00000417448 IL1BP01584 269 aa18.33■□□□□ 0.52
VCP-202ENST00000417448 SLC2A3P11169 496 aa18.33■□□□□ 0.52
VCP-202ENST00000417448 VAV1P15498 845 aa18.33■□□□□ 0.52
VCP-202ENST00000417448 PTPN9P43378 593 aa18.33■□□□□ 0.52
VCP-202ENST00000417448 CLN3Q13286 438 aa18.33■□□□□ 0.52
VCP-202ENST00000417448 AUHQ13825 339 aaKnown RBP18.33■□□□□ 0.52
VCP-202ENST00000417448 STAT4Q14765 748 aa18.33■□□□□ 0.52
VCP-202ENST00000417448 SLC18A3Q16572 532 aa18.33■□□□□ 0.52
VCP-202ENST00000417448 ISXQ2M1V0 245 aa18.33■□□□□ 0.52
VCP-202ENST00000417448 PITRM1Q5JRX3 1037 aa18.33■□□□□ 0.52
VCP-202ENST00000417448 C6orf132Q5T0Z8 1188 aa18.33■□□□□ 0.52
VCP-202ENST00000417448 FBXL22Q6P050 247 aa18.33■□□□□ 0.52
VCP-202ENST00000417448 CPNE8Q86YQ8 564 aa18.33■□□□□ 0.52
VCP-202ENST00000417448 CENPIQ92674 756 aaPredicted RBP18.33■□□□□ 0.52
VCP-202ENST00000417448 ATXN7L3BQ96GX2 97 aa18.33■□□□□ 0.52
VCP-202ENST00000417448 CCDC42Q96M95 316 aa18.33■□□□□ 0.52
VCP-202ENST00000417448 ANKRD62A6NC57 917 aa18.32■□□□□ 0.52
VCP-202ENST00000417448 CDRT15L2A8MXV6 281 aa18.32■□□□□ 0.52
VCP-202ENST00000417448 F5H5T6 163 aa18.32■□□□□ 0.52
VCP-202ENST00000417448 EFSO43281 561 aa18.32■□□□□ 0.52
VCP-202ENST00000417448 GP1BAP07359 652 aa18.32■□□□□ 0.52
VCP-202ENST00000417448 TGM2P21980 687 aa18.32■□□□□ 0.52
VCP-202ENST00000417448 PSMA2P25787 234 aa18.32■□□□□ 0.52
VCP-202ENST00000417448 STK19P49842 368 aaPredicted RBP18.32■□□□□ 0.52
VCP-202ENST00000417448 ZNF143P52747 638 aaPredicted RBP18.32■□□□□ 0.52
VCP-202ENST00000417448 ARL13BQ3SXY8 428 aa18.32■□□□□ 0.52
VCP-202ENST00000417448 BRMS1LQ5PSV4 323 aa18.32■□□□□ 0.52
VCP-202ENST00000417448 PPP1R2P3Q6NXS1 205 aa18.32■□□□□ 0.52
VCP-202ENST00000417448 PYROXD2Q8N2H3 581 aa18.32■□□□□ 0.52
VCP-202ENST00000417448 ARFGAP1Q8N6T3 406 aa18.32■□□□□ 0.52
VCP-202ENST00000417448 HJURPQ8NCD3 748 aaPredicted RBP18.32■□□□□ 0.52
VCP-202ENST00000417448 RPL10LQ96L21 214 aaKnown RBP18.32■□□□□ 0.52
VCP-202ENST00000417448 DDX50Q9BQ39 737 aaKnown RBP18.32■□□□□ 0.52
VCP-202ENST00000417448 CNPY3Q9BT09 278 aa18.32■□□□□ 0.52
VCP-202ENST00000417448 GPATCH2LQ9NWQ4 482 aa18.32■□□□□ 0.52
VCP-202ENST00000417448 TFR2Q9UP52 801 aa18.32■□□□□ 0.52
VCP-202ENST00000417448 DMTF1Q9Y222 760 aa18.32■□□□□ 0.52
VCP-202ENST00000417448 UTP20O75691 2785 aaKnown RBP18.32■□□□□ 0.52
VCP-202ENST00000417448 SSU72P8A0A1W2PR75 194 aa18.31■□□□□ 0.52
VCP-202ENST00000417448 PLRG1O43660 514 aaKnown RBP18.31■□□□□ 0.52
VCP-202ENST00000417448 SRGAP2O75044 1071 aa18.31■□□□□ 0.52
VCP-202ENST00000417448 PIAS2O75928 621 aa18.31■□□□□ 0.52
VCP-202ENST00000417448 CNTN5O94779 1100 aa18.31■□□□□ 0.52
VCP-202ENST00000417448 SRPRAP08240 638 aaKnown RBP18.31■□□□□ 0.52
VCP-202ENST00000417448 ADRA1BP35368 520 aa18.31■□□□□ 0.52
VCP-202ENST00000417448 ARTNQ5T4W7 220 aa18.31■□□□□ 0.52
VCP-202ENST00000417448 STRADAQ7RTN6 431 aa18.31■□□□□ 0.52
VCP-202ENST00000417448 TRIM69Q86WT6 500 aa18.31■□□□□ 0.52
VCP-202ENST00000417448 TMEM145Q8NBT3 493 aa18.31■□□□□ 0.52
VCP-202ENST00000417448 KLHDC7BQ96G42 594 aa18.31■□□□□ 0.52
VCP-202ENST00000417448 RPRD1AQ96P16 312 aaPredicted RBP18.31■□□□□ 0.52
VCP-202ENST00000417448 MYOCQ99972 504 aa18.31■□□□□ 0.52
VCP-202ENST00000417448 NUP85Q9BW27 656 aa18.31■□□□□ 0.52
VCP-202ENST00000417448 STARD5Q9NSY2 213 aa18.31■□□□□ 0.52
VCP-202ENST00000417448 KLHL11Q9NVR0 708 aa18.31■□□□□ 0.52
VCP-202ENST00000417448 MPP6Q9NZW5 540 aa18.31■□□□□ 0.52
VCP-202ENST00000417448 PCSK1NQ9UHG2 260 aa18.31■□□□□ 0.52
VCP-202ENST00000417448 SARDHQ9UL12 918 aa18.31■□□□□ 0.52
VCP-202ENST00000417448 ENTPD2Q9Y5L3 495 aa18.31■□□□□ 0.52
VCP-202ENST00000417448 SOWAHDA6NJG2 315 aa18.3■□□□□ 0.52
VCP-202ENST00000417448 FAM72CH0Y354 149 aa18.3■□□□□ 0.52
VCP-202ENST00000417448 CYP1A2P05177 515 aa18.3■□□□□ 0.52
VCP-202ENST00000417448 THEGLP0DJG4 465 aa18.3■□□□□ 0.52
VCP-202ENST00000417448 MYBL1P10243 752 aa18.3■□□□□ 0.52
VCP-202ENST00000417448 TCF4P15884 667 aa18.3■□□□□ 0.52
VCP-202ENST00000417448 ITGB6P18564 788 aa18.3■□□□□ 0.52
VCP-202ENST00000417448 RBMS1P29558 406 aaKnown RBP18.3■□□□□ 0.52
VCP-202ENST00000417448 CDC25BP30305 580 aa18.3■□□□□ 0.52
VCP-202ENST00000417448 ELAVL3Q14576 367 aaKnown RBP18.3■□□□□ 0.52
VCP-202ENST00000417448 ALFQ53S48 1182 aa18.3■□□□□ 0.52
VCP-202ENST00000417448 HS1BP3Q53T59 392 aa18.3■□□□□ 0.52
VCP-202ENST00000417448 FAM72AQ5TYM5 149 aa18.3■□□□□ 0.52
VCP-202ENST00000417448 AGBL4Q5VU57 503 aa18.3■□□□□ 0.52
VCP-202ENST00000417448 FAM72DQ6L9T8 149 aa18.3■□□□□ 0.52
VCP-202ENST00000417448 FAM72BQ86X60 149 aa18.3■□□□□ 0.52
VCP-202ENST00000417448 APCDD1Q8J025 514 aa18.3■□□□□ 0.52
VCP-202ENST00000417448 ZNF557Q8N988 423 aaPredicted RBP18.3■□□□□ 0.52
VCP-202ENST00000417448 IFI44Q8TCB0 444 aa18.3■□□□□ 0.52
VCP-202ENST00000417448 MAPK15Q8TD08 544 aa18.3■□□□□ 0.52
VCP-202ENST00000417448 TRIM11Q96F44 468 aa18.3■□□□□ 0.52
VCP-202ENST00000417448 IRX2Q9BZI1 471 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms