RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 AREL1O15033 823 aa15.04■□□□□ -0
RPS28-201ENST00000417088 EPHB6O15197 1021 aa15.04■□□□□ -0
RPS28-201ENST00000417088 AQP9O43315 295 aa15.04■□□□□ -0
RPS28-201ENST00000417088 RAMP2O60895 175 aa15.04■□□□□ -0
RPS28-201ENST00000417088 DXOO77932 396 aaKnown RBP15.04■□□□□ -0
RPS28-201ENST00000417088 POP4O95707 220 aaKnown RBP15.04■□□□□ -0
RPS28-201ENST00000417088 UGT2B4P06133 528 aa15.04■□□□□ -0
RPS28-201ENST00000417088 PLEKP08567 350 aaPredicted RBP15.04■□□□□ -0
RPS28-201ENST00000417088 JUNDP17535 347 aa15.04■□□□□ -0
RPS28-201ENST00000417088 LSSP48449 732 aa15.04■□□□□ -0
RPS28-201ENST00000417088 HDAC4P56524 1084 aa15.04■□□□□ -0
RPS28-201ENST00000417088 POLR2FP61218 127 aaKnown RBP15.04■□□□□ -0
RPS28-201ENST00000417088 SNRPD1P62314 119 aaKnown RBP15.04■□□□□ -0
RPS28-201ENST00000417088 GABREP78334 506 aa15.04■□□□□ -0
RPS28-201ENST00000417088 PTP4A2Q12974 167 aa15.04■□□□□ -0
RPS28-201ENST00000417088 CDKN3Q16667 212 aa15.04■□□□□ -0
RPS28-201ENST00000417088 DEFB133Q30KQ1 61 aa15.04■□□□□ -0
RPS28-201ENST00000417088 CT47A1Q5JQC4 288 aaPredicted RBP15.04■□□□□ -0
RPS28-201ENST00000417088 GPR155Q7Z3F1 870 aa15.04■□□□□ -0
RPS28-201ENST00000417088 LSMEM2Q8N112 164 aa15.04■□□□□ -0
RPS28-201ENST00000417088 CCDC185Q8N715 623 aa15.04■□□□□ -0
RPS28-201ENST00000417088 LMX1AQ8TE12 382 aa15.04■□□□□ -0
RPS28-201ENST00000417088 CENPTQ96BT3 561 aa15.04■□□□□ -0
RPS28-201ENST00000417088 TBC1D31Q96DN5 1066 aa15.04■□□□□ -0
RPS28-201ENST00000417088 HIC2Q96JB3 615 aa15.04■□□□□ -0
RPS28-201ENST00000417088 KLHL32Q96NJ5 620 aa15.04■□□□□ -0
RPS28-201ENST00000417088 ABCG4Q9H172 646 aa15.04■□□□□ -0
RPS28-201ENST00000417088 NUP62CLQ9H1M0 184 aa15.04■□□□□ -0
RPS28-201ENST00000417088 VPS16Q9H269 839 aa15.04■□□□□ -0
RPS28-201ENST00000417088 CHMP5Q9NZZ3 219 aa15.04■□□□□ -0
RPS28-201ENST00000417088 SALL4Q9UJQ4 1053 aa15.04■□□□□ -0
RPS28-201ENST00000417088 HPCAL4Q9UM19 191 aa15.04■□□□□ -0
RPS28-201ENST00000417088 KALRNO60229 2985 aa15.04■□□□□ -0
RPS28-201ENST00000417088 MGAQ8IWI9 3026 aa15.03■□□□□ -0
RPS28-201ENST00000417088 CPED1A4D0V7 1026 aa15.03■□□□□ -0
RPS28-201ENST00000417088 TPP1O14773 563 aa15.03■□□□□ -0
RPS28-201ENST00000417088 KDELR3O43731 214 aa15.03■□□□□ -0
RPS28-201ENST00000417088 LZTS3O60299 673 aaPredicted RBP15.03■□□□□ -0
RPS28-201ENST00000417088 C1QL1O75973 258 aa15.03■□□□□ -0
RPS28-201ENST00000417088 UNGP13051 313 aaPredicted RBP15.03■□□□□ -0
RPS28-201ENST00000417088 TGM2P21980 687 aa15.03■□□□□ -0
RPS28-201ENST00000417088 RFC1P35251 1148 aaPredicted RBP15.03■□□□□ -0
RPS28-201ENST00000417088 SOX5P35711 763 aa15.03■□□□□ -0
RPS28-201ENST00000417088 JAM2P57087 298 aa15.03■□□□□ -0
RPS28-201ENST00000417088 PCBP4P57723 403 aaKnown RBP15.03■□□□□ -0
RPS28-201ENST00000417088 C19orf57Q0VDD7 668 aa15.03■□□□□ -0
RPS28-201ENST00000417088 ISXQ2M1V0 245 aa15.03■□□□□ -0
RPS28-201ENST00000417088 ATXN7L2Q5T6C5 722 aaPredicted RBP15.03■□□□□ -0
RPS28-201ENST00000417088 GUSBP11Q6P575 273 aa15.03■□□□□ -0
RPS28-201ENST00000417088 GDPD4Q6W3E5 623 aa15.03■□□□□ -0
RPS28-201ENST00000417088 TRIM72Q6ZMU5 477 aa15.03■□□□□ -0
RPS28-201ENST00000417088 RBFAQ8N0V3 343 aa15.03■□□□□ -0
RPS28-201ENST00000417088 LSM14AQ8ND56 463 aaKnown RBP15.03■□□□□ -0
RPS28-201ENST00000417088 ZNF248Q8NDW4 579 aa15.03■□□□□ -0
RPS28-201ENST00000417088 FAM172AQ8WUF8 416 aa15.03■□□□□ -0
RPS28-201ENST00000417088 NTAN1Q96AB6 310 aa15.03■□□□□ -0
RPS28-201ENST00000417088 ARHGEF26Q96DR7 871 aa15.03■□□□□ -0
RPS28-201ENST00000417088 NAF1Q96HR8 494 aaKnown RBP15.03■□□□□ -0
RPS28-201ENST00000417088 PCDHB18PQ96TA0 734 aa15.03■□□□□ -0
RPS28-201ENST00000417088 LGMNQ99538 433 aa15.03■□□□□ -0
RPS28-201ENST00000417088 OSBPL1AQ9BXW6 950 aa15.03■□□□□ -0
RPS28-201ENST00000417088 TCEAL2Q9H3H9 227 aaPredicted RBP15.03■□□□□ -0
RPS28-201ENST00000417088 NOL6Q9H6R4 1146 aaKnown RBP15.03■□□□□ -0
RPS28-201ENST00000417088 POLR1BQ9H9Y6 1135 aa15.03■□□□□ -0
RPS28-201ENST00000417088 NLRC4Q9NPP4 1024 aa15.03■□□□□ -0
RPS28-201ENST00000417088 FAM207AQ9NSI2 230 aaPredicted RBP15.03■□□□□ -0
RPS28-201ENST00000417088 PNMA8BQ9ULN7 279 aaPredicted RBP15.03■□□□□ -0
RPS28-201ENST00000417088 TEX51A0A1B0GUA7 166 aa15.02■□□□□ -0
RPS28-201ENST00000417088 EME2A4GXA9 379 aaPredicted RBP15.02■□□□□ -0
RPS28-201ENST00000417088 BUB1O43683 1085 aa15.02■□□□□ -0
RPS28-201ENST00000417088 MMP20O60882 483 aa15.02■□□□□ -0
RPS28-201ENST00000417088 TMCC1O94876 653 aa15.02■□□□□ -0
RPS28-201ENST00000417088 KRT3P12035 628 aa15.02■□□□□ -0
RPS28-201ENST00000417088 IGFALSP35858 605 aa15.02■□□□□ -0
RPS28-201ENST00000417088 CXADRP78310 365 aa15.02■□□□□ -0
RPS28-201ENST00000417088 KRT31Q15323 416 aa15.02■□□□□ -0
RPS28-201ENST00000417088 LRRC73Q5JTD7 316 aa15.02■□□□□ -0
RPS28-201ENST00000417088 CDKAL1Q5VV42 579 aa15.02■□□□□ -0
RPS28-201ENST00000417088 WDR59Q6PJI9 974 aa15.02■□□□□ -0
RPS28-201ENST00000417088 EFL1Q7Z2Z2 1120 aaKnown RBP15.02■□□□□ -0
RPS28-201ENST00000417088 TTC7BQ86TV6 843 aa15.02■□□□□ -0
RPS28-201ENST00000417088 PYROXD2Q8N2H3 581 aa15.02■□□□□ -0
RPS28-201ENST00000417088 NETO2Q8NC67 525 aa15.02■□□□□ -0
RPS28-201ENST00000417088 ENOX1Q8TC92 643 aaKnown RBP15.02■□□□□ -0
RPS28-201ENST00000417088 BTN2A2Q8WVV5 523 aa15.02■□□□□ -0
RPS28-201ENST00000417088 KLC2Q9H0B6 622 aa15.02■□□□□ -0
RPS28-201ENST00000417088 ASCL3Q9NQ33 180 aa15.02■□□□□ -0
RPS28-201ENST00000417088 NCKIPSDQ9NZQ3 722 aa15.02■□□□□ -0
RPS28-201ENST00000417088 SPASTQ9UBP0 616 aa15.02■□□□□ -0
RPS28-201ENST00000417088 A0A1W2PNU3 283 aaPredicted RBP15.01□□□□□ -0.01
RPS28-201ENST00000417088 ZSCAN5CA6NGD5 496 aaPredicted RBP15.01□□□□□ -0.01
RPS28-201ENST00000417088 RIOK3O14730 519 aaKnown RBP15.01□□□□□ -0.01
RPS28-201ENST00000417088 GCATO75600 419 aa15.01□□□□□ -0.01
RPS28-201ENST00000417088 TIMP2P16035 220 aa15.01□□□□□ -0.01
RPS28-201ENST00000417088 ITIH2P19823 946 aa15.01□□□□□ -0.01
RPS28-201ENST00000417088 GPD1P21695 349 aa15.01□□□□□ -0.01
RPS28-201ENST00000417088 STAT1P42224 750 aa15.01□□□□□ -0.01
RPS28-201ENST00000417088 THOP1P52888 689 aa15.01□□□□□ -0.01
RPS28-201ENST00000417088 GSCP56915 257 aaPredicted RBP15.01□□□□□ -0.01
RPS28-201ENST00000417088 ERVPABLB-1P60509 514 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms