RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 AKT2P31751 481 aa15.33■□□□□ 0.04
UBXN4-203ENST00000416538 SERINC3Q13530 473 aa15.33■□□□□ 0.04
UBXN4-203ENST00000416538 PROX2Q3B8N5 592 aa15.33■□□□□ 0.04
UBXN4-203ENST00000416538 ZNF805Q5CZA5 627 aa15.33■□□□□ 0.04
UBXN4-203ENST00000416538 KIAA1161Q6NSJ0 714 aa15.33■□□□□ 0.04
UBXN4-203ENST00000416538 DCUN1D2Q6PH85 259 aa15.33■□□□□ 0.04
UBXN4-203ENST00000416538 PTAR1Q7Z6K3 402 aaPredicted RBP15.33■□□□□ 0.04
UBXN4-203ENST00000416538 UMODL1-AS1Q8N2C9 162 aa15.33■□□□□ 0.04
UBXN4-203ENST00000416538 RYBPQ8N488 228 aaPredicted RBP15.33■□□□□ 0.04
UBXN4-203ENST00000416538 OXR1Q8N573 874 aa15.33■□□□□ 0.04
UBXN4-203ENST00000416538 NPWQ8N729 165 aa15.33■□□□□ 0.04
UBXN4-203ENST00000416538 KCTD15Q96SI1 283 aaPredicted RBP15.33■□□□□ 0.04
UBXN4-203ENST00000416538 LRRC19Q9H756 370 aa15.33■□□□□ 0.04
UBXN4-203ENST00000416538 AIPL1Q9NZN9 384 aa15.33■□□□□ 0.04
UBXN4-203ENST00000416538 AP4E1Q9UPM8 1137 aa15.33■□□□□ 0.04
UBXN4-203ENST00000416538 LAMA5O15230 3695 aa15.32■□□□□ 0.04
UBXN4-203ENST00000416538 KIF26BQ2KJY2 2108 aa15.32■□□□□ 0.04
UBXN4-203ENST00000416538 SYCE3A1L190 88 aa15.32■□□□□ 0.04
UBXN4-203ENST00000416538 TMEM191CA6NGB0 347 aa15.32■□□□□ 0.04
UBXN4-203ENST00000416538 IGLON5A6NGN9 336 aa15.32■□□□□ 0.04
UBXN4-203ENST00000416538 AREL1O15033 823 aa15.32■□□□□ 0.04
UBXN4-203ENST00000416538 PIAS2O75928 621 aa15.32■□□□□ 0.04
UBXN4-203ENST00000416538 PIGNO95427 931 aa15.32■□□□□ 0.04
UBXN4-203ENST00000416538 PAK4O96013 591 aaPredicted RBP15.32■□□□□ 0.04
UBXN4-203ENST00000416538 TCF4P15884 667 aa15.32■□□□□ 0.04
UBXN4-203ENST00000416538 PSMA2P25787 234 aa15.32■□□□□ 0.04
UBXN4-203ENST00000416538 PBX1P40424 430 aa15.32■□□□□ 0.04
UBXN4-203ENST00000416538 RGRP47804 291 aa15.32■□□□□ 0.04
UBXN4-203ENST00000416538 AIF1P55008 147 aa15.32■□□□□ 0.04
UBXN4-203ENST00000416538 GEMIN4P57678 1058 aaKnown RBP15.32■□□□□ 0.04
UBXN4-203ENST00000416538 SNRPD1P62314 119 aaKnown RBP15.32■□□□□ 0.04
UBXN4-203ENST00000416538 NR1I3Q14994 352 aa15.32■□□□□ 0.04
UBXN4-203ENST00000416538 CYTH1Q15438 398 aa15.32■□□□□ 0.04
UBXN4-203ENST00000416538 MYLK3Q32MK0 819 aa15.32■□□□□ 0.04
UBXN4-203ENST00000416538 ZNF542PQ5EBM4 170 aa15.32■□□□□ 0.04
UBXN4-203ENST00000416538 HGSNATQ68CP4 663 aa15.32■□□□□ 0.04
UBXN4-203ENST00000416538 FBXL19Q6PCT2 694 aa15.32■□□□□ 0.04
UBXN4-203ENST00000416538 KYAT3Q6YP21 454 aaKnown RBP15.32■□□□□ 0.04
UBXN4-203ENST00000416538 LUZP1Q86V48 1076 aa15.32■□□□□ 0.04
UBXN4-203ENST00000416538 ARHGAP12Q8IWW6 846 aa15.32■□□□□ 0.04
UBXN4-203ENST00000416538 TP53INP2Q8IXH6 220 aa15.32■□□□□ 0.04
UBXN4-203ENST00000416538 CELF6Q96J87 481 aaKnown RBP15.32■□□□□ 0.04
UBXN4-203ENST00000416538 VCPIP1Q96JH7 1222 aa15.32■□□□□ 0.04
UBXN4-203ENST00000416538 GDAP1L1Q96MZ0 367 aa15.32■□□□□ 0.04
UBXN4-203ENST00000416538 KLHL32Q96NJ5 620 aa15.32■□□□□ 0.04
UBXN4-203ENST00000416538 EPAS1Q99814 870 aa15.32■□□□□ 0.04
UBXN4-203ENST00000416538 SLC17A9Q9BYT1 436 aa15.32■□□□□ 0.04
UBXN4-203ENST00000416538 CBX8Q9HC52 389 aa15.32■□□□□ 0.04
UBXN4-203ENST00000416538 PNMA8BQ9ULN7 279 aaPredicted RBP15.32■□□□□ 0.04
UBXN4-203ENST00000416538 MFHAS1Q9Y4C4 1052 aa15.32■□□□□ 0.04
UBXN4-203ENST00000416538 PCDHGA1Q9Y5H4 931 aa15.32■□□□□ 0.04
UBXN4-203ENST00000416538 LY6G6EA0A0G2JKS1 128 aa15.31■□□□□ 0.04
UBXN4-203ENST00000416538 ANKRD62A6NC57 917 aa15.31■□□□□ 0.04
UBXN4-203ENST00000416538 ZSCAN5CA6NGD5 496 aaPredicted RBP15.31■□□□□ 0.04
UBXN4-203ENST00000416538 A6NNZ2 444 aa15.31■□□□□ 0.04
UBXN4-203ENST00000416538 SMTNL1A8MU46 457 aa15.31■□□□□ 0.04
UBXN4-203ENST00000416538 J3KR12 359 aa15.31■□□□□ 0.04
UBXN4-203ENST00000416538 FFAR2O15552 330 aa15.31■□□□□ 0.04
UBXN4-203ENST00000416538 SIGLEC6O43699 453 aa15.31■□□□□ 0.04
UBXN4-203ENST00000416538 LRCH4O75427 683 aa15.31■□□□□ 0.04
UBXN4-203ENST00000416538 RFPL3O75679 317 aa15.31■□□□□ 0.04
UBXN4-203ENST00000416538 CCDC172P0C7W6 258 aa15.31■□□□□ 0.04
UBXN4-203ENST00000416538 DGKAP23743 735 aa15.31■□□□□ 0.04
UBXN4-203ENST00000416538 MIPP30301 263 aa15.31■□□□□ 0.04
UBXN4-203ENST00000416538 IGFALSP35858 605 aa15.31■□□□□ 0.04
UBXN4-203ENST00000416538 YBEYP58557 167 aaPredicted RBP15.31■□□□□ 0.04
UBXN4-203ENST00000416538 TPI1P60174 286 aa15.31■□□□□ 0.04
UBXN4-203ENST00000416538 RPS21P63220 83 aaKnown RBP15.31■□□□□ 0.04
UBXN4-203ENST00000416538 FZD2Q14332 565 aa15.31■□□□□ 0.04
UBXN4-203ENST00000416538 ARHGAP36Q6ZRI8 547 aa15.31■□□□□ 0.04
UBXN4-203ENST00000416538 Q6ZSR6 202 aa15.31■□□□□ 0.04
UBXN4-203ENST00000416538 ZSWIM9Q86XI8 627 aa15.31■□□□□ 0.04
UBXN4-203ENST00000416538 ZNF354CQ86Y25 554 aa15.31■□□□□ 0.04
UBXN4-203ENST00000416538 NSMCE3Q96MG7 304 aa15.31■□□□□ 0.04
UBXN4-203ENST00000416538 C1QTNF2Q9BXJ5 285 aa15.31■□□□□ 0.04
UBXN4-203ENST00000416538 DHX35Q9H5Z1 703 aaKnown RBP15.31■□□□□ 0.04
UBXN4-203ENST00000416538 PARVAQ9NVD7 372 aa15.31■□□□□ 0.04
UBXN4-203ENST00000416538 KLHL11Q9NVR0 708 aa15.31■□□□□ 0.04
UBXN4-203ENST00000416538 CNOT8Q9UFF9 292 aaKnown RBP15.31■□□□□ 0.04
UBXN4-203ENST00000416538 PCSK1NQ9UHG2 260 aa15.31■□□□□ 0.04
UBXN4-203ENST00000416538 KLF15Q9UIH9 416 aa15.31■□□□□ 0.04
UBXN4-203ENST00000416538 HPCAL4Q9UM19 191 aa15.31■□□□□ 0.04
UBXN4-203ENST00000416538 U3KQA8 63 aa15.31■□□□□ 0.04
UBXN4-203ENST00000416538 ITPR1Q14643 2758 aa15.3■□□□□ 0.04
UBXN4-203ENST00000416538 FGF10O15520 208 aaPredicted RBP15.3■□□□□ 0.04
UBXN4-203ENST00000416538 MAGEC1O60732 1142 aa15.3■□□□□ 0.04
UBXN4-203ENST00000416538 POP4O95707 220 aaKnown RBP15.3■□□□□ 0.04
UBXN4-203ENST00000416538 FTLP02792 175 aaPredicted RBP15.3■□□□□ 0.04
UBXN4-203ENST00000416538 MYF5P13349 255 aa15.3■□□□□ 0.04
UBXN4-203ENST00000416538 IL1R2P27930 398 aa15.3■□□□□ 0.04
UBXN4-203ENST00000416538 RHOAP61586 193 aa15.3■□□□□ 0.04
UBXN4-203ENST00000416538 KLHL30Q0D2K2 578 aa15.3■□□□□ 0.04
UBXN4-203ENST00000416538 CCDC15Q0P6D6 951 aa15.3■□□□□ 0.04
UBXN4-203ENST00000416538 PARP15Q460N3 678 aa15.3■□□□□ 0.04
UBXN4-203ENST00000416538 HES3Q5TGS1 186 aa15.3■□□□□ 0.04
UBXN4-203ENST00000416538 AFMIDQ63HM1 303 aa15.3■□□□□ 0.04
UBXN4-203ENST00000416538 GALNT15Q8N3T1 639 aa15.3■□□□□ 0.04
UBXN4-203ENST00000416538 ZNF653Q96CK0 615 aa15.3■□□□□ 0.04
UBXN4-203ENST00000416538 LRIG1Q96JA1 1093 aa15.3■□□□□ 0.04
UBXN4-203ENST00000416538 SLC39A8Q9C0K1 460 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms