RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 DNAJB2P25686 324 aa18.21■□□□□ 0.5
SCARB1-203ENST00000415380 UBXN11Q5T124 520 aa18.21■□□□□ 0.5
SCARB1-203ENST00000415380 EDEM1Q92611 657 aa18.21■□□□□ 0.5
SCARB1-203ENST00000415380 EME1Q96AY2 570 aa18.21■□□□□ 0.5
SCARB1-203ENST00000415380 TBL1YQ9BQ87 522 aa18.21■□□□□ 0.5
SCARB1-203ENST00000415380 PCDHAC1Q9H158 963 aa18.21■□□□□ 0.5
SCARB1-203ENST00000415380 OSBPL2Q9H1P3 480 aa18.21■□□□□ 0.5
SCARB1-203ENST00000415380 WDCPQ9H6R7 721 aa18.21■□□□□ 0.5
SCARB1-203ENST00000415380 TMCO1Q9UM00 188 aa18.21■□□□□ 0.5
SCARB1-203ENST00000415380 PHF24Q9UPV7 400 aa18.21■□□□□ 0.5
SCARB1-203ENST00000415380 FIS1Q9Y3D6 152 aa18.21■□□□□ 0.5
SCARB1-203ENST00000415380 RRN3P2A6NIE6 340 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 PSMD3O43242 534 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 ARNTP27540 789 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 ARCN1P48444 511 aaKnown RBP18.2■□□□□ 0.5
SCARB1-203ENST00000415380 INHBCP55103 352 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 NRF1Q16656 503 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 ARHGAP36Q6ZRI8 547 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 TRIM67Q6ZTA4 783 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 FASTKD5Q7L8L6 764 aaKnown RBP18.2■□□□□ 0.5
SCARB1-203ENST00000415380 PTAR1Q7Z6K3 402 aaPredicted RBP18.2■□□□□ 0.5
SCARB1-203ENST00000415380 AMIGO2Q86SJ2 522 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 OR6J1Q8NGC5 347 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 HMGCLL1Q8TB92 370 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 DDI1Q8WTU0 396 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 HEXDCQ8WVB3 486 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 ELMO2Q96JJ3 720 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 SEMA6AQ9H2E6 1030 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 TMEM30AQ9NV96 361 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 SUCOQ9UBS9 1254 aaKnown RBP18.2■□□□□ 0.5
SCARB1-203ENST00000415380 SLC2A6Q9UGQ3 507 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 NUP205Q92621 2012 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 BPTFQ12830 3046 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 A0A1B0GTW7 788 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 NEMP2A6NFY4 417 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 E7ENX8 843 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 GABRDO14764 452 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 CACNG3O60359 315 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 SLC1A2P43004 574 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 POLD2P49005 469 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 TAS2R39P59534 338 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 PDAP1Q13442 181 aaKnown RBP18.2■□□□□ 0.5
SCARB1-203ENST00000415380 TRIM25Q14258 630 aaKnown RBP18.2■□□□□ 0.5
SCARB1-203ENST00000415380 TMEM259Q4ZIN3 620 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 PIWIL4Q7Z3Z4 852 aaKnown RBP18.2■□□□□ 0.5
SCARB1-203ENST00000415380 KLHDC8BQ8IXV7 354 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 ZMIZ2Q8NF64 920 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 DDX18Q9NVP1 670 aaKnown RBP18.2■□□□□ 0.5
SCARB1-203ENST00000415380 HSFX1Q9UBD0 423 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 AP4S1Q9Y587 144 aa18.2■□□□□ 0.5
SCARB1-203ENST00000415380 C7orf72A4D263 438 aa18.19■□□□□ 0.5
SCARB1-203ENST00000415380 UNCXA6NJT0 531 aa18.19■□□□□ 0.5
SCARB1-203ENST00000415380 TMCC1O94876 653 aa18.19■□□□□ 0.5
SCARB1-203ENST00000415380 C8BP07358 591 aa18.19■□□□□ 0.5
SCARB1-203ENST00000415380 HOXD8P13378 290 aaPredicted RBP18.19■□□□□ 0.5
SCARB1-203ENST00000415380 PSMC3P17980 439 aa18.19■□□□□ 0.5
SCARB1-203ENST00000415380 CDC42EP1Q00587 391 aa18.19■□□□□ 0.5
SCARB1-203ENST00000415380 SULT2A1Q06520 285 aa18.19■□□□□ 0.5
SCARB1-203ENST00000415380 SPNS2Q8IVW8 549 aa18.19■□□□□ 0.5
SCARB1-203ENST00000415380 CHERPQ8IWX8 916 aaKnown RBP18.19■□□□□ 0.5
SCARB1-203ENST00000415380 IPMKQ8NFU5 416 aa18.19■□□□□ 0.5
SCARB1-203ENST00000415380 SPPL2BQ8TCT7 592 aa18.19■□□□□ 0.5
SCARB1-203ENST00000415380 MRPL57Q9BQC6 102 aaKnown RBP18.19■□□□□ 0.5
SCARB1-203ENST00000415380 COQ10BQ9H8M1 238 aa18.19■□□□□ 0.5
SCARB1-203ENST00000415380 TRPC7Q9HCX4 862 aa18.19■□□□□ 0.5
SCARB1-203ENST00000415380 CNGB3Q9NQW8 809 aa18.19■□□□□ 0.5
SCARB1-203ENST00000415380 AAR2Q9Y312 384 aaKnown RBP18.19■□□□□ 0.5
SCARB1-203ENST00000415380 AXLP30530 894 aa18.19■□□□□ 0.5
SCARB1-203ENST00000415380 BAG6P46379 1132 aa18.19■□□□□ 0.5
SCARB1-203ENST00000415380 PSMD8P48556 350 aa18.19■□□□□ 0.5
SCARB1-203ENST00000415380 NR1H2P55055 460 aa18.19■□□□□ 0.5
SCARB1-203ENST00000415380 PCBP1Q15365 356 aaKnown RBP eCLIP18.19■□□□□ 0.51e-7■■■□□ 18.8
SCARB1-203ENST00000415380 DENND5AQ6IQ26 1287 aa18.19■□□□□ 0.5
SCARB1-203ENST00000415380 ZNF280DQ6N043 979 aa18.19■□□□□ 0.5
SCARB1-203ENST00000415380 CHSY3Q70JA7 882 aa18.19■□□□□ 0.5
SCARB1-203ENST00000415380 FAM35AQ86V20 835 aa18.19■□□□□ 0.5
SCARB1-203ENST00000415380 LRTOMTQ8WZ04 291 aa18.19■□□□□ 0.5
SCARB1-203ENST00000415380 TSGA13Q96PP4 275 aa18.19■□□□□ 0.5
SCARB1-203ENST00000415380 CACNG4Q9UBN1 327 aa18.19■□□□□ 0.5
SCARB1-203ENST00000415380 RNF11Q9Y3C5 154 aa18.19■□□□□ 0.5
SCARB1-203ENST00000415380 DFFAO00273 331 aa18.18■□□□□ 0.5
SCARB1-203ENST00000415380 ATP5F1P24539 256 aaPredicted RBP18.18■□□□□ 0.5
SCARB1-203ENST00000415380 CXCR3P49682 368 aa18.18■□□□□ 0.5
SCARB1-203ENST00000415380 DNAJB13P59910 316 aa18.18■□□□□ 0.5
SCARB1-203ENST00000415380 LRP8Q14114 963 aa18.18■□□□□ 0.5
SCARB1-203ENST00000415380 EML3Q32P44 896 aa18.18■□□□□ 0.5
SCARB1-203ENST00000415380 PPHLN1Q8NEY8 458 aaKnown RBP18.18■□□□□ 0.5
SCARB1-203ENST00000415380 ZNF419Q96HQ0 510 aaPredicted RBP18.18■□□□□ 0.5
SCARB1-203ENST00000415380 FICDQ9BVA6 458 aa18.18■□□□□ 0.5
SCARB1-203ENST00000415380 UNC93B1Q9H1C4 597 aa18.18■□□□□ 0.5
SCARB1-203ENST00000415380 TNFRSF12AQ9NP84 129 aa18.18■□□□□ 0.5
SCARB1-203ENST00000415380 CACNA2D2Q9NY47 1150 aa18.18■□□□□ 0.5
SCARB1-203ENST00000415380 PADI4Q9UM07 663 aa18.18■□□□□ 0.5
SCARB1-203ENST00000415380 IPPQ9Y573 584 aa18.18■□□□□ 0.5
SCARB1-203ENST00000415380 FBP2O00757 339 aa18.18■□□□□ 0.5
SCARB1-203ENST00000415380 CSPG5O95196 566 aa18.18■□□□□ 0.5
SCARB1-203ENST00000415380 F9P00740 461 aa18.18■□□□□ 0.5
SCARB1-203ENST00000415380 SMIM10L2AP0DMW4 78 aa18.18■□□□□ 0.5
SCARB1-203ENST00000415380 SMIM10L2BP0DMW5 78 aa18.18■□□□□ 0.5
SCARB1-203ENST00000415380 HDCP19113 662 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms