RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 KLHL6Q8WZ60 621 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 STMN2Q93045 179 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 C1GALT1C1Q96EU7 318 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 ZBTB45Q96K62 511 aaPredicted RBP9.54□□□□□ -0.88
SNHG3-201ENST00000413987 ZC3H10Q96K80 434 aaKnown RBP9.54□□□□□ -0.88
SNHG3-201ENST00000413987 HAPLN3Q96S86 360 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 SPATA16Q9BXB7 569 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 EPS8L2Q9H6S3 715 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 C8orf33Q9H7E9 229 aaPredicted RBP9.54□□□□□ -0.88
SNHG3-201ENST00000413987 XPNPEP3Q9NQH7 507 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 STX18Q9P2W9 335 aaKnown RBP9.54□□□□□ -0.88
SNHG3-201ENST00000413987 CPSF3Q9UKF6 684 aaKnown RBP9.54□□□□□ -0.88
SNHG3-201ENST00000413987 AKT3Q9Y243 479 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 PCDHB5Q9Y5E4 795 aa9.54□□□□□ -0.88
SNHG3-201ENST00000413987 IGKV6-21A0A0C4DH24 114 aa9.53□□□□□ -0.88
SNHG3-201ENST00000413987 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.53□□□□□ -0.88
SNHG3-201ENST00000413987 HGSO14964 777 aaPredicted RBP9.53□□□□□ -0.88
SNHG3-201ENST00000413987 HNRNPDLO14979 420 aaKnown RBP9.53□□□□□ -0.88
SNHG3-201ENST00000413987 B4GALT5O43286 388 aa9.53□□□□□ -0.88
SNHG3-201ENST00000413987 CALUO43852 315 aaPredicted RBP9.53□□□□□ -0.88
SNHG3-201ENST00000413987 DUSP11O75319 330 aaKnown RBP9.53□□□□□ -0.88
SNHG3-201ENST00000413987 PLGP00747 810 aaPredicted RBP9.53□□□□□ -0.88
SNHG3-201ENST00000413987 HMGCRP04035 888 aa9.53□□□□□ -0.88
SNHG3-201ENST00000413987 DLATP10515 647 aaKnown RBP9.53□□□□□ -0.88
SNHG3-201ENST00000413987 RARBP10826 455 aa9.53□□□□□ -0.88
SNHG3-201ENST00000413987 CREB1P16220 341 aa9.53□□□□□ -0.88
SNHG3-201ENST00000413987 NNMTP40261 264 aa9.53□□□□□ -0.88
SNHG3-201ENST00000413987 WNT7BP56706 349 aa9.53□□□□□ -0.88
SNHG3-201ENST00000413987 CREB5Q02930 508 aa9.53□□□□□ -0.88
SNHG3-201ENST00000413987 LSAMPQ13449 338 aa9.53□□□□□ -0.88
SNHG3-201ENST00000413987 DBN1Q16643 649 aa9.53□□□□□ -0.88
SNHG3-201ENST00000413987 CLEC16AQ2KHT3 1053 aa9.53□□□□□ -0.88
SNHG3-201ENST00000413987 MPEG1Q2M385 716 aa9.53□□□□□ -0.88
SNHG3-201ENST00000413987 CNPY1Q3B7I2 92 aa9.53□□□□□ -0.88
SNHG3-201ENST00000413987 KHDC1Q4VXA5 237 aaKnown RBP9.53□□□□□ -0.88
SNHG3-201ENST00000413987 ACAD10Q6JQN1 1059 aa9.53□□□□□ -0.88
SNHG3-201ENST00000413987 DRICH1Q6PGQ1 229 aaPredicted RBP9.53□□□□□ -0.88
SNHG3-201ENST00000413987 P3H2Q8IVL5 708 aa9.53□□□□□ -0.88
SNHG3-201ENST00000413987 ALDH16A1Q8IZ83 802 aa9.53□□□□□ -0.88
SNHG3-201ENST00000413987 ARHGAP24Q8N264 748 aa9.53□□□□□ -0.88
SNHG3-201ENST00000413987 C12orf50Q8NA57 414 aaPredicted RBP9.53□□□□□ -0.88
SNHG3-201ENST00000413987 ST8SIA4Q92187 359 aa9.53□□□□□ -0.88
SNHG3-201ENST00000413987 SLCO2A1Q92959 643 aa9.53□□□□□ -0.88
SNHG3-201ENST00000413987 PPP1R14BQ96C90 147 aa9.53□□□□□ -0.88
SNHG3-201ENST00000413987 DDX50Q9BQ39 737 aaKnown RBP9.53□□□□□ -0.88
SNHG3-201ENST00000413987 LRFN3Q9BTN0 628 aa9.53□□□□□ -0.88
SNHG3-201ENST00000413987 HAPLN2Q9GZV7 340 aa9.53□□□□□ -0.88
SNHG3-201ENST00000413987 TRPV6Q9H1D0 765 aa9.53□□□□□ -0.88
SNHG3-201ENST00000413987 WNT8AQ9H1J5 351 aa9.53□□□□□ -0.88
SNHG3-201ENST00000413987 MLXIPLQ9NP71 852 aa9.53□□□□□ -0.88
SNHG3-201ENST00000413987 OBP2BQ9NPH6 170 aa9.53□□□□□ -0.88
SNHG3-201ENST00000413987 ANKFY1Q9P2R3 1169 aa9.53□□□□□ -0.88
SNHG3-201ENST00000413987 FETUBQ9UGM5 382 aa9.53□□□□□ -0.88
SNHG3-201ENST00000413987 ZFP69BQ9UJL9 534 aa9.53□□□□□ -0.88
SNHG3-201ENST00000413987 ANGPTL2Q9UKU9 493 aa9.53□□□□□ -0.88
SNHG3-201ENST00000413987 RANBP2P49792 3224 aaKnown RBP9.53□□□□□ -0.88
SNHG3-201ENST00000413987 A8MXQ7 604 aa9.52□□□□□ -0.88
SNHG3-201ENST00000413987 GPR89AB7ZAQ6 455 aa9.52□□□□□ -0.88
SNHG3-201ENST00000413987 PDXKO00764 312 aa9.52□□□□□ -0.88
SNHG3-201ENST00000413987 SLC16A3O15427 465 aaKnown RBP9.52□□□□□ -0.88
SNHG3-201ENST00000413987 CILPO75339 1184 aa9.52□□□□□ -0.88
SNHG3-201ENST00000413987 ACSL3O95573 720 aa9.52□□□□□ -0.88
SNHG3-201ENST00000413987 POP4O95707 220 aaKnown RBP9.52□□□□□ -0.88
SNHG3-201ENST00000413987 S100A9P06702 114 aaKnown RBP9.52□□□□□ -0.88
SNHG3-201ENST00000413987 GPR89BP0CG08 455 aa9.52□□□□□ -0.88
SNHG3-201ENST00000413987 TRIM49P0CI25 452 aa9.52□□□□□ -0.88
SNHG3-201ENST00000413987 TRIM49CP0CI26 452 aa9.52□□□□□ -0.88
SNHG3-201ENST00000413987 CSH1P0DML2 217 aa9.52□□□□□ -0.88
SNHG3-201ENST00000413987 CSH2P0DML3 217 aa9.52□□□□□ -0.88
SNHG3-201ENST00000413987 TSHRP16473 764 aa9.52□□□□□ -0.88
SNHG3-201ENST00000413987 RPL13P26373 211 aaKnown RBP9.52□□□□□ -0.88
SNHG3-201ENST00000413987 FOXN2P32314 431 aa9.52□□□□□ -0.88
SNHG3-201ENST00000413987 GRIA2P42262 883 aa9.52□□□□□ -0.88
SNHG3-201ENST00000413987 SLC26A2P50443 739 aa9.52□□□□□ -0.88
SNHG3-201ENST00000413987 CREMQ03060 361 aa9.52□□□□□ -0.88
SNHG3-201ENST00000413987 KIZQ2M2Z5 673 aa9.52□□□□□ -0.88
SNHG3-201ENST00000413987 KCNT1Q5JUK3 1230 aa9.52□□□□□ -0.88
SNHG3-201ENST00000413987 ZBTB41Q5SVQ8 909 aa9.52□□□□□ -0.88
SNHG3-201ENST00000413987 RNF19BQ6ZMZ0 732 aa9.52□□□□□ -0.88
SNHG3-201ENST00000413987 KIF18BQ86Y91 864 aa9.52□□□□□ -0.88
SNHG3-201ENST00000413987 C10orf53Q8N6V4 93 aa9.52□□□□□ -0.88
SNHG3-201ENST00000413987 MFSD2AQ8NA29 543 aa9.52□□□□□ -0.88
SNHG3-201ENST00000413987 PSPC1Q8WXF1 523 aaKnown RBP9.52□□□□□ -0.88
SNHG3-201ENST00000413987 JADE3Q92613 823 aa9.52□□□□□ -0.88
SNHG3-201ENST00000413987 ELMO3Q96BJ8 720 aa9.52□□□□□ -0.88
SNHG3-201ENST00000413987 HS6ST2Q96MM7 605 aa9.52□□□□□ -0.88
SNHG3-201ENST00000413987 ZNF184Q99676 751 aaPredicted RBP9.52□□□□□ -0.88
SNHG3-201ENST00000413987 REXO4Q9GZR2 422 aaKnown RBP9.52□□□□□ -0.88
SNHG3-201ENST00000413987 ERVMER34-1Q9H9K5 563 aa9.52□□□□□ -0.88
SNHG3-201ENST00000413987 DECR2Q9NUI1 292 aa9.52□□□□□ -0.88
SNHG3-201ENST00000413987 NDUFA13Q9P0J0 144 aa9.52□□□□□ -0.88
SNHG3-201ENST00000413987 CACNG4Q9UBN1 327 aa9.52□□□□□ -0.88
SNHG3-201ENST00000413987 SMG5Q9UPR3 1016 aaKnown RBP9.52□□□□□ -0.88
SNHG3-201ENST00000413987 ALG6Q9Y672 507 aa9.52□□□□□ -0.88
SNHG3-201ENST00000413987 A0A087WZ62 844 aa9.52□□□□□ -0.89
SNHG3-201ENST00000413987 CAPN14A8MX76 684 aa9.52□□□□□ -0.89
SNHG3-201ENST00000413987 C2CD2LO14523 706 aa9.52□□□□□ -0.89
SNHG3-201ENST00000413987 KHNYNO15037 678 aaKnown RBP9.52□□□□□ -0.89
SNHG3-201ENST00000413987 EDF1O60869 148 aaKnown RBP9.52□□□□□ -0.89
SNHG3-201ENST00000413987 TBX10O75333 385 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms