RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 PAFAH1B1P43034 410 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 PGGT1BP53609 377 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 TMPRSS3P57727 454 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 UFM1P61960 85 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 PPATQ06203 517 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 G3BP1Q13283 466 aaKnown RBP eCLIP4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 TDGQ13569 410 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 LPIN1Q14693 890 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 SERTAD4-AS1Q5TG53 156 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 MOB3CQ70IA8 216 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 H1FNTQ75WM6 255 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 TRILQ7L0X0 811 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 CTU1Q7Z7A3 348 aaKnown RBP4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 TADA2BQ86TJ2 420 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 FAM160B2Q86V87 743 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 ARMC8Q8IUR7 673 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 DENND6AQ8IWF6 608 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 CADM3Q8N126 398 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 TCP11L2Q8N4U5 519 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 RFFLQ8WZ73 363 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 RNF183Q96D59 192 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 LBHD1Q9BQE6 289 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 MSTO1Q9BUK6 570 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 POLDIP3Q9BY77 421 aaKnown RBP4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 PLAC1Q9HBJ0 212 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 SNTG1Q9NSN8 517 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 ANKRD10Q9NXR5 420 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 KCND2Q9NZV8 630 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 MPP6Q9NZW5 540 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 HSPB7Q9UBY9 170 aa4.01□□□□□ -1.77
HMGB1P11-201ENST00000413899 KDM3AQ9Y4C1 1321 aa4□□□□□ -1.77
HMGB1P11-201ENST00000413899 I6L893 689 aaPredicted RBP4□□□□□ -1.77
HMGB1P11-201ENST00000413899 TNFRSF13BO14836 293 aaPredicted RBP4□□□□□ -1.77
HMGB1P11-201ENST00000413899 TNFSF14O43557 240 aa4□□□□□ -1.77
HMGB1P11-201ENST00000413899 SLC25A17O43808 307 aa4□□□□□ -1.77
HMGB1P11-201ENST00000413899 CYP1A2P05177 515 aa4□□□□□ -1.77
HMGB1P11-201ENST00000413899 GALTP07902 379 aa4□□□□□ -1.77
HMGB1P11-201ENST00000413899 SLC2A4P14672 509 aa4□□□□□ -1.77
HMGB1P11-201ENST00000413899 FMO4P31512 558 aa4□□□□□ -1.77
HMGB1P11-201ENST00000413899 LINC00205P59089 165 aa4□□□□□ -1.77
HMGB1P11-201ENST00000413899 ADORA2A-AS1P86434 159 aa4□□□□□ -1.77
HMGB1P11-201ENST00000413899 MPP1Q00013 466 aa4□□□□□ -1.77
HMGB1P11-201ENST00000413899 ROR2Q01974 943 aaKnown RBP4□□□□□ -1.77
HMGB1P11-201ENST00000413899 TRAF1Q13077 416 aa4□□□□□ -1.77
HMGB1P11-201ENST00000413899 GPR18Q14330 331 aa4□□□□□ -1.77
HMGB1P11-201ENST00000413899 FAM69AQ5T7M9 428 aa4□□□□□ -1.77
HMGB1P11-201ENST00000413899 LRCH2Q5VUJ6 765 aa4□□□□□ -1.77
HMGB1P11-201ENST00000413899 DAB2IPQ5VWQ8 1189 aa4□□□□□ -1.77
HMGB1P11-201ENST00000413899 C9orf47Q6ZRZ4 202 aa4□□□□□ -1.77
HMGB1P11-201ENST00000413899 RRM2BQ7LG56 351 aa4□□□□□ -1.77
HMGB1P11-201ENST00000413899 PELI3Q8N2H9 469 aa4□□□□□ -1.77
HMGB1P11-201ENST00000413899 RASSF8Q8NHQ8 419 aa4□□□□□ -1.77
HMGB1P11-201ENST00000413899 SNAPC3Q92966 411 aa4□□□□□ -1.77
HMGB1P11-201ENST00000413899 ZUFSPQ96AP4 578 aa4□□□□□ -1.77
HMGB1P11-201ENST00000413899 NAP1L4Q99733 375 aaKnown RBP4□□□□□ -1.77
HMGB1P11-201ENST00000413899 CDT1Q9H211 546 aa4□□□□□ -1.77
HMGB1P11-201ENST00000413899 BRF2Q9HAW0 419 aa4□□□□□ -1.77
HMGB1P11-201ENST00000413899 VEZTQ9HBM0 779 aa4□□□□□ -1.77
HMGB1P11-201ENST00000413899 BABAM1Q9NWV8 329 aa4□□□□□ -1.77
HMGB1P11-201ENST00000413899 NCKIPSDQ9NZQ3 722 aa4□□□□□ -1.77
HMGB1P11-201ENST00000413899 IL36RNQ9UBH0 155 aa4□□□□□ -1.77
HMGB1P11-201ENST00000413899 SARDHQ9UL12 918 aa4□□□□□ -1.77
HMGB1P11-201ENST00000413899 SRPRBQ9Y5M8 271 aaKnown RBP4□□□□□ -1.77
HMGB1P11-201ENST00000413899 RSF1Q96T23 1441 aaPredicted RBP4□□□□□ -1.77
HMGB1P11-201ENST00000413899 PEG3Q9GZU2 1588 aa4□□□□□ -1.77
HMGB1P11-201ENST00000413899 A0A0U1RQF3 1178 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 CHL1O00533 1208 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 VWA5AO00534 786 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 RGS14O43566 566 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 TMEM63AO94886 807 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 PCNAP12004 261 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 ATP1A3P13637 1013 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 SRD5A1P18405 259 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 SCP2P22307 547 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 MYF6P23409 242 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 EPHA8P29322 1005 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 ABCD1P33897 745 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 RFX5P48382 616 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 CXCR3P49682 368 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 ENTPD1P49961 510 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 EFNA5P52803 228 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 CASP6P55212 293 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 ST3GAL1Q11201 340 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 TAF11Q15544 211 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 ZNF284Q2VY69 593 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 ZNF260Q3ZCT1 412 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 SLC9B1Q4ZJI4 515 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 DCAF6Q58WW2 860 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 DNTTIP2Q5QJE6 756 aaKnown RBP3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 OTUD1Q5VV17 481 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 TXNDC8Q6A555 127 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 Q6ZSV7 163 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 ZNF367Q7RTV3 350 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 TBC1D26Q86UD7 250 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 TEX19Q8NA77 164 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 NSMCE1Q8WV22 266 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 CAMK1GQ96NX5 476 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 NR1H4Q96RI1 486 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 GFM1Q96RP9 751 aaKnown RBP3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 YME1L1Q96TA2 773 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms