RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 CCDC117Q8IWD4 279 aaPredicted RBP8.73□□□□□ -1.01
HMGN1P34-201ENST00000413023 CMTM8Q8IZV2 173 aa8.73□□□□□ -1.01
HMGN1P34-201ENST00000413023 CPXM2Q8N436 756 aa8.73□□□□□ -1.01
HMGN1P34-201ENST00000413023 PIP4P2Q8N4L2 257 aa8.73□□□□□ -1.01
HMGN1P34-201ENST00000413023 TDRD5Q8NAT2 981 aaKnown RBP8.73□□□□□ -1.01
HMGN1P34-201ENST00000413023 SH3RF2Q8TEC5 729 aa8.73□□□□□ -1.01
HMGN1P34-201ENST00000413023 PTPRN2Q92932 1015 aa8.73□□□□□ -1.01
HMGN1P34-201ENST00000413023 RSPRY1Q96DX4 576 aa8.73□□□□□ -1.01
HMGN1P34-201ENST00000413023 RANBP9Q96S59 729 aa8.73□□□□□ -1.01
HMGN1P34-201ENST00000413023 DDX50Q9BQ39 737 aaKnown RBP8.73□□□□□ -1.01
HMGN1P34-201ENST00000413023 MGME1Q9BQP7 344 aa8.73□□□□□ -1.01
HMGN1P34-201ENST00000413023 FAM107BQ9H098 131 aa8.73□□□□□ -1.01
HMGN1P34-201ENST00000413023 C20orf96Q9NUD7 363 aaPredicted RBP8.73□□□□□ -1.01
HMGN1P34-201ENST00000413023 ZNF358Q9NW07 568 aa8.73□□□□□ -1.01
HMGN1P34-201ENST00000413023 DONSONQ9NYP3 566 aa8.73□□□□□ -1.01
HMGN1P34-201ENST00000413023 SENP1Q9P0U3 644 aa8.73□□□□□ -1.01
HMGN1P34-201ENST00000413023 UBA2Q9UBT2 640 aaPredicted RBP8.73□□□□□ -1.01
HMGN1P34-201ENST00000413023 GGT7Q9UJ14 662 aa8.73□□□□□ -1.01
HMGN1P34-201ENST00000413023 EMCNQ9ULC0 261 aa8.73□□□□□ -1.01
HMGN1P34-201ENST00000413023 SMG5Q9UPR3 1016 aaKnown RBP8.73□□□□□ -1.01
HMGN1P34-201ENST00000413023 TCAF1Q9Y4C2 921 aa8.73□□□□□ -1.01
HMGN1P34-201ENST00000413023 SPO11Q9Y5K1 396 aa8.73□□□□□ -1.01
HMGN1P34-201ENST00000413023 ANAPC1Q9H1A4 1944 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 DOCK4Q8N1I0 1966 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 AURKAO14965 403 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 BUD23O43709 281 aaKnown RBP8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 LPXNO60711 386 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 VAPBO95292 243 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 PRAMEF12O95522 483 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 C1RP00736 705 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 AHSGP02765 367 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 CKMP06732 381 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 PDHA1P08559 390 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 PIRTP0C851 137 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 CDC25CP30307 473 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 SLC8A1P32418 973 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 CD70P32970 193 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 CTSOP43234 321 aaPredicted RBP8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 MAGEA12P43365 314 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 SERPINB9P50453 376 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 SERPINH1P50454 418 aaKnown RBP8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 CDK18Q07002 472 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 LMAN2Q12907 356 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 CTBP1Q13363 440 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 PDE1CQ14123 709 aaPredicted RBP8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 DLG2Q15700 870 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 ZNF789Q5FWF6 425 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 TSTD2Q5T7W7 516 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 GRTP1Q5TC63 336 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 FYB2Q5VWT5 728 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 FSTL4Q6MZW2 842 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 C16orf46Q6P387 395 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 ZNF449Q6P9G9 518 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 NCEH1Q6PIU2 408 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 C6orf89Q6UWU4 347 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 ATG14Q6ZNE5 492 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 TPGS1Q6ZTW0 290 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 STRA8Q7Z7C7 330 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 KCNMB4Q86W47 210 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 DENND6AQ8IWF6 608 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 PLD6Q8N2A8 252 aaKnown RBP8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 DCLK2Q8N568 766 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 HJURPQ8NCD3 748 aaPredicted RBP8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 OR13J1Q8NGT2 312 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 ZNF75CPQ92670 426 aaPredicted RBP8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 SGSM3Q96HU1 749 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 APOPT1Q96IL0 206 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 SEC16BQ96JE7 1060 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 FEM1CQ96JP0 617 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 EXOC2Q96KP1 924 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 MAGEB18Q96M61 343 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 PAIP2Q9BPZ3 127 aaKnown RBP8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 ELAC2Q9BQ52 826 aaKnown RBP8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 LBHD1Q9BQE6 289 aaPredicted RBP8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 SLC13A1Q9BZW2 595 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 TASP1Q9H6P5 420 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 ZNF395Q9H8N7 513 aaPredicted RBP8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 MRM3Q9HC36 420 aaKnown RBP8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 ASAH2Q9NR71 780 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 VPS45Q9NRW7 570 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 NKIRAS1Q9NYS0 192 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 SAMD15Q9P1V8 674 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 VPS51Q9UID3 782 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 ARHGAP26Q9UNA1 814 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 FCF1Q9Y324 198 aaKnown RBP8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 PLLPQ9Y342 182 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 PCDHGC4Q9Y5F7 938 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 SHROOM3Q8TF72 1996 aa8.72□□□□□ -1.01
HMGN1P34-201ENST00000413023 MYO18AQ92614 2054 aaKnown RBP8.71□□□□□ -1.01
HMGN1P34-201ENST00000413023 CCDC195A0A1B0GUA6 201 aa8.71□□□□□ -1.02
HMGN1P34-201ENST00000413023 E2F8A0AVK6 867 aa8.71□□□□□ -1.02
HMGN1P34-201ENST00000413023 OR51F1A6NGY5 319 aa8.71□□□□□ -1.02
HMGN1P34-201ENST00000413023 H0Y626 953 aa8.71□□□□□ -1.02
HMGN1P34-201ENST00000413023 AP3B1O00203 1094 aa8.71□□□□□ -1.02
HMGN1P34-201ENST00000413023 NDUFAB1O14561 156 aa8.71□□□□□ -1.02
HMGN1P34-201ENST00000413023 TPP1O14773 563 aa8.71□□□□□ -1.02
HMGN1P34-201ENST00000413023 TRIM24O15164 1050 aa8.71□□□□□ -1.02
HMGN1P34-201ENST00000413023 SIN3BO75182 1162 aa8.71□□□□□ -1.02
HMGN1P34-201ENST00000413023 KRT37O76014 449 aa8.71□□□□□ -1.02
HMGN1P34-201ENST00000413023 KRT38O76015 456 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms