RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 OR14C36Q8NHC7 312 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 LRRN4Q8WUT4 740 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 PIGKQ92643 395 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 TCEAL3Q969E4 200 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 PPP1R16AQ96I34 528 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 KLHL32Q96NJ5 620 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 HINFPQ9BQA5 517 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 MGME1Q9BQP7 344 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 CINPQ9BW66 212 aaPredicted RBP13.34□□□□□ -0.27
HDAC8-210ENST00000412342 OSBPL1AQ9BXW6 950 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 TSGA10Q9BZW7 698 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 KCNF1Q9H3M0 494 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 KDM4CQ9H3R0 1056 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 VPS45Q9NRW7 570 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 ADAMTS9Q9P2N4 1935 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 PTPRZ1P23471 2315 aaPredicted RBP13.33□□□□□ -0.28
HDAC8-210ENST00000412342 LRRC72A6NJI9 287 aa13.33□□□□□ -0.28
HDAC8-210ENST00000412342 C16orf96A6NNT2 1141 aa13.33□□□□□ -0.28
HDAC8-210ENST00000412342 MEI4A8MW99 385 aa13.33□□□□□ -0.28
HDAC8-210ENST00000412342 MATN3O15232 486 aa13.33□□□□□ -0.28
HDAC8-210ENST00000412342 DDX3YO15523 660 aaKnown RBP13.33□□□□□ -0.28
HDAC8-210ENST00000412342 PIGNO95427 931 aa13.33□□□□□ -0.28
HDAC8-210ENST00000412342 CCDC175P0C221 793 aa13.33□□□□□ -0.28
HDAC8-210ENST00000412342 ADRB3P13945 408 aa13.33□□□□□ -0.28
HDAC8-210ENST00000412342 PECAM1P16284 738 aaPredicted RBP13.33□□□□□ -0.28
HDAC8-210ENST00000412342 ZFXP17010 805 aaPredicted RBP13.33□□□□□ -0.28
HDAC8-210ENST00000412342 MX2P20592 715 aa13.33□□□□□ -0.28
HDAC8-210ENST00000412342 CCNCP24863 283 aa13.33□□□□□ -0.28
HDAC8-210ENST00000412342 PTPN7P35236 360 aa13.33□□□□□ -0.28
HDAC8-210ENST00000412342 DPP6P42658 865 aa13.33□□□□□ -0.28
HDAC8-210ENST00000412342 CCR5P51681 352 aa13.33□□□□□ -0.28
HDAC8-210ENST00000412342 NEK3P51956 506 aa13.33□□□□□ -0.28
HDAC8-210ENST00000412342 HNRNPDQ14103 355 aaKnown RBP13.33□□□□□ -0.28
HDAC8-210ENST00000412342 LLGL1Q15334 1064 aa13.33□□□□□ -0.28
HDAC8-210ENST00000412342 SF3A2Q15428 464 aaKnown RBP13.33□□□□□ -0.28
HDAC8-210ENST00000412342 TFDP3Q5H9I0 405 aa13.33□□□□□ -0.28
HDAC8-210ENST00000412342 WDR45BQ5MNZ6 344 aa13.33□□□□□ -0.28
HDAC8-210ENST00000412342 ALG1LQ6GMV1 187 aa13.33□□□□□ -0.28
HDAC8-210ENST00000412342 GDPD4Q6W3E5 623 aa13.33□□□□□ -0.28
HDAC8-210ENST00000412342 PRR23CQ6ZRP0 262 aa13.33□□□□□ -0.28
HDAC8-210ENST00000412342 SRLQ86TD4 932 aa13.33□□□□□ -0.28
HDAC8-210ENST00000412342 ZSWIM9Q86XI8 627 aa13.33□□□□□ -0.28
HDAC8-210ENST00000412342 RFX6Q8HWS3 928 aa13.33□□□□□ -0.28
HDAC8-210ENST00000412342 SYCE1Q8N0S2 351 aa13.33□□□□□ -0.28
HDAC8-210ENST00000412342 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.33□□□□□ -0.28
HDAC8-210ENST00000412342 RBM41Q96IZ5 413 aaKnown RBP13.33□□□□□ -0.28
HDAC8-210ENST00000412342 LGMNQ99538 433 aa13.33□□□□□ -0.28
HDAC8-210ENST00000412342 CAPN10Q9HC96 672 aa13.33□□□□□ -0.28
HDAC8-210ENST00000412342 RXFP3Q9NSD7 469 aa13.33□□□□□ -0.28
HDAC8-210ENST00000412342 DKK3Q9UBP4 350 aa13.33□□□□□ -0.28
HDAC8-210ENST00000412342 AMFRQ9UKV5 643 aa13.33□□□□□ -0.28
HDAC8-210ENST00000412342 PACSIN2Q9UNF0 486 aaPredicted RBP13.33□□□□□ -0.28
HDAC8-210ENST00000412342 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.33□□□□□ -0.28
HDAC8-210ENST00000412342 LRRK1Q38SD2 2015 aa13.33□□□□□ -0.28
HDAC8-210ENST00000412342 TTC24A2A3L6 582 aaPredicted RBP13.32□□□□□ -0.28
HDAC8-210ENST00000412342 FAM47DPA6NHR8 397 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 TRAFD1O14545 582 aaPredicted RBP13.32□□□□□ -0.28
HDAC8-210ENST00000412342 AREL1O15033 823 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 AP1G1O43747 822 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 KRT86O43790 486 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 CST8O60676 142 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 FSBPO95073 299 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 FTCDO95954 541 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 PYGMP11217 842 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 TGM2P21980 687 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 HSPA9P38646 679 aaKnown RBP13.32□□□□□ -0.28
HDAC8-210ENST00000412342 MMP13P45452 471 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 RENBPP51606 427 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 COPS2P61201 443 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 AP1S1P61966 158 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 DYNLT1P63172 113 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 RAD51Q06609 339 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 TFDP2Q14188 446 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 ZNF235Q14590 738 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 IHHQ14623 411 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 SYCP2LQ5T4T6 812 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 MARC1Q5VT66 337 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 TIGD7Q6NT04 549 aaPredicted RBP13.32□□□□□ -0.28
HDAC8-210ENST00000412342 AADACL2Q6P093 401 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 SLC23A3Q6PIS1 610 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 BBS12Q6ZW61 710 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 PEX26Q7Z412 305 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 TRIM69Q86WT6 500 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 CAMK1DQ8IU85 385 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 CCDC13Q8IYE1 715 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 GPR161Q8N6U8 529 aaKnown RBP13.32□□□□□ -0.28
HDAC8-210ENST00000412342 HCAR2Q8TDS4 363 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 SPOCK2Q92563 424 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 ECHDC3Q96DC8 303 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 HES6Q96HZ4 224 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 NUDCD1Q96RS6 583 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 TUBGCP5Q96RT8 1024 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 MAK16Q9BXY0 300 aaKnown RBP13.32□□□□□ -0.28
HDAC8-210ENST00000412342 PREBQ9HCU5 417 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 DYRK4Q9NR20 520 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 SAE1Q9UBE0 346 aaPredicted RBP13.32□□□□□ -0.28
HDAC8-210ENST00000412342 EIF2B4Q9UI10 523 aaKnown RBP13.32□□□□□ -0.28
HDAC8-210ENST00000412342 GUCA1BQ9UMX6 200 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 EFR3BQ9Y2G0 817 aa13.32□□□□□ -0.28
HDAC8-210ENST00000412342 PPP2R2CQ9Y2T4 447 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms