RNA–Protein interactions for RNA: ENST00000411243.1

RNU4-61P-201, Transcript of RNA, U4 small nuclear 61, pseudogene, humanhuman

BASIC

Gene RNU4-61P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-61P-201ENST00000411243 GXYLT2A0PJZ3 443 aa0.89□□□□□ -2.27
RNU4-61P-201ENST00000411243 C1orf226A1L170 272 aa0.89□□□□□ -2.27
RNU4-61P-201ENST00000411243 PHOX2AO14813 284 aa0.89□□□□□ -2.27
RNU4-61P-201ENST00000411243 SYTL3Q4VX76 610 aa0.89□□□□□ -2.27
RNU4-61P-201ENST00000411243 TAF1BQ53T94 588 aaPredicted RBP0.89□□□□□ -2.27
RNU4-61P-201ENST00000411243 SEL1L3Q68CR1 1132 aa0.89□□□□□ -2.27
RNU4-61P-201ENST00000411243 B3GNT9Q6UX72 402 aa0.89□□□□□ -2.27
RNU4-61P-201ENST00000411243 KRT27Q7Z3Y8 459 aa0.89□□□□□ -2.27
RNU4-61P-201ENST00000411243 KRT77Q7Z794 578 aa0.89□□□□□ -2.27
RNU4-61P-201ENST00000411243 TRPT1Q86TN4 253 aaKnown RBP0.89□□□□□ -2.27
RNU4-61P-201ENST00000411243 TMEM219Q86XT9 240 aa0.89□□□□□ -2.27
RNU4-61P-201ENST00000411243 HERC6Q8IVU3 1022 aa0.89□□□□□ -2.27
RNU4-61P-201ENST00000411243 ODF3L1Q8IXM7 274 aa0.89□□□□□ -2.27
RNU4-61P-201ENST00000411243 GPATCH1Q9BRR8 931 aaKnown RBP0.89□□□□□ -2.27
RNU4-61P-201ENST00000411243 ATP6V0A4Q9HBG4 840 aa0.89□□□□□ -2.27
RNU4-61P-201ENST00000411243 FBXO28Q9NVF7 368 aa0.89□□□□□ -2.27
RNU4-61P-201ENST00000411243 KLHL8Q9P2G9 620 aaPredicted RBP0.89□□□□□ -2.27
RNU4-61P-201ENST00000411243 SLC9A2Q9UBY0 812 aa0.89□□□□□ -2.27
RNU4-61P-201ENST00000411243 CHL1O00533 1208 aa0.88□□□□□ -2.27
RNU4-61P-201ENST00000411243 MOCS3O95396 460 aa0.88□□□□□ -2.27
RNU4-61P-201ENST00000411243 TUBB8Q3ZCM7 444 aa0.88□□□□□ -2.27
RNU4-61P-201ENST00000411243 FAM171A1Q5VUB5 890 aa0.88□□□□□ -2.27
RNU4-61P-201ENST00000411243 CCNI2Q6ZMN8 369 aaPredicted RBP0.88□□□□□ -2.27
RNU4-61P-201ENST00000411243 FAM110DQ8TAY7 271 aaPredicted RBP0.88□□□□□ -2.27
RNU4-61P-201ENST00000411243 HDAC7Q8WUI4 952 aa0.88□□□□□ -2.27
RNU4-61P-201ENST00000411243 OMA1Q96E52 524 aa0.88□□□□□ -2.27
RNU4-61P-201ENST00000411243 MAP3K14Q99558 947 aa0.88□□□□□ -2.27
RNU4-61P-201ENST00000411243 OR6C3Q9NZP0 311 aa0.88□□□□□ -2.27
RNU4-61P-201ENST00000411243 AFF4Q9UHB7 1163 aaKnown RBP0.88□□□□□ -2.27
RNU4-61P-201ENST00000411243 ZDHHC2Q9UIJ5 367 aa0.88□□□□□ -2.27
RNU4-61P-201ENST00000411243 C3orf70A6NLC5 250 aaPredicted RBP0.87□□□□□ -2.27
RNU4-61P-201ENST00000411243 ITIH1P19827 911 aa0.87□□□□□ -2.27
RNU4-61P-201ENST00000411243 HTR1BP28222 390 aa0.87□□□□□ -2.27
RNU4-61P-201ENST00000411243 MAP2K2P36507 400 aa0.87□□□□□ -2.27
RNU4-61P-201ENST00000411243 BMXP51813 675 aa0.87□□□□□ -2.27
RNU4-61P-201ENST00000411243 SUMO3P55854 103 aaPredicted RBP0.87□□□□□ -2.27
RNU4-61P-201ENST00000411243 RPS16P62249 146 aaKnown RBP0.87□□□□□ -2.27
RNU4-61P-201ENST00000411243 MPEG1Q2M385 716 aa0.87□□□□□ -2.27
RNU4-61P-201ENST00000411243 C5orf22Q49AR2 442 aa0.87□□□□□ -2.27
RNU4-61P-201ENST00000411243 C3orf38Q5JPI3 329 aa0.87□□□□□ -2.27
RNU4-61P-201ENST00000411243 STXBP5Q5T5C0 1151 aa0.87□□□□□ -2.27
RNU4-61P-201ENST00000411243 ADAMTSL4-AS1Q5T5F5 129 aa0.87□□□□□ -2.27
RNU4-61P-201ENST00000411243 GPRIN3Q6ZVF9 776 aa0.87□□□□□ -2.27
RNU4-61P-201ENST00000411243 CREB3L4Q8TEY5 395 aa0.87□□□□□ -2.27
RNU4-61P-201ENST00000411243 FCAMRQ8WWV6 532 aa0.87□□□□□ -2.27
RNU4-61P-201ENST00000411243 C1GALT1C1Q96EU7 318 aa0.87□□□□□ -2.27
RNU4-61P-201ENST00000411243 AS3MTQ9HBK9 375 aa0.87□□□□□ -2.27
RNU4-61P-201ENST00000411243 TLR8Q9NR97 1041 aaKnown RBP0.87□□□□□ -2.27
RNU4-61P-201ENST00000411243 ARL15Q9NXU5 204 aa0.87□□□□□ -2.27
RNU4-61P-201ENST00000411243 C1RLQ9NZP8 487 aa0.87□□□□□ -2.27
RNU4-61P-201ENST00000411243 ZNF180Q9UJW8 692 aa0.87□□□□□ -2.27
RNU4-61P-201ENST00000411243 IGLV7-46A0A075B6I9 117 aa0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 ENPP3O14638 875 aa0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 CCNT2O60583 730 aaKnown RBP0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 CTNND1O60716 968 aaKnown RBP0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 IGKV3-11P04433 115 aa0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 CEACAM1P13688 526 aa0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 CARSP49589 748 aaKnown RBP0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 TAS2R50P59544 299 aa0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 SPOCK1Q08629 439 aa0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 AMZ1Q400G9 498 aa0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 NCAPH2Q6IBW4 605 aa0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 SLC30A9Q6PML9 568 aa0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 ANKS1BQ7Z6G8 1248 aa0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 TRIM74Q86UV6 250 aa0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 TRIM73Q86UV7 250 aa0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 JAZF1Q86VZ6 243 aa0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 KMT5CQ86Y97 462 aa0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 IPCEF1Q8WWN9 437 aaPredicted RBP0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 HPS3Q969F9 1004 aa0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 STAMBPL1Q96FJ0 436 aa0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 SCRN2Q96FV2 425 aa0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 CNOT6LQ96LI5 555 aaKnown RBP0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 ZIM3Q96PE6 472 aa0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 RPP25Q9BUL9 199 aaKnown RBP0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 FKRPQ9H9S5 495 aa0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 ZBTB26Q9HCK0 441 aa0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 Q9N2J8 555 aa0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 INTS10Q9NVR2 710 aaKnown RBP0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 ITGB1BP2Q9UKP3 347 aa0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 PKP3Q9Y446 797 aa0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 KIF25-AS1Q9Y6Z4 181 aa0.86□□□□□ -2.27
RNU4-61P-201ENST00000411243 CIDEAO60543 219 aa0.85□□□□□ -2.27
RNU4-61P-201ENST00000411243 TRIM49P0CI25 452 aa0.85□□□□□ -2.27
RNU4-61P-201ENST00000411243 TRIM49CP0CI26 452 aa0.85□□□□□ -2.27
RNU4-61P-201ENST00000411243 ATICP31939 592 aa0.85□□□□□ -2.27
RNU4-61P-201ENST00000411243 USP8P40818 1118 aa0.85□□□□□ -2.27
RNU4-61P-201ENST00000411243 LYZP61626 148 aa0.85□□□□□ -2.27
RNU4-61P-201ENST00000411243 TLE3Q04726 772 aa0.85□□□□□ -2.27
RNU4-61P-201ENST00000411243 CHAF1AQ13111 956 aaPredicted RBP0.85□□□□□ -2.27
RNU4-61P-201ENST00000411243 GRAPQ13588 217 aa0.85□□□□□ -2.27
RNU4-61P-201ENST00000411243 P3H1Q32P28 736 aa0.85□□□□□ -2.27
RNU4-61P-201ENST00000411243 DCAF6Q58WW2 860 aa0.85□□□□□ -2.27
RNU4-61P-201ENST00000411243 SIRPB2Q5JXA9 342 aa0.85□□□□□ -2.27
RNU4-61P-201ENST00000411243 KRTAP5-10Q6L8G5 202 aa0.85□□□□□ -2.27
RNU4-61P-201ENST00000411243 RBMS3Q6XE24 437 aaKnown RBP0.85□□□□□ -2.27
RNU4-61P-201ENST00000411243 UNC13DQ70J99 1090 aa0.85□□□□□ -2.27
RNU4-61P-201ENST00000411243 TBC1D1Q86TI0 1168 aaPredicted RBP0.85□□□□□ -2.27
RNU4-61P-201ENST00000411243 RTN4RL2Q86UN3 420 aa0.85□□□□□ -2.27
RNU4-61P-201ENST00000411243 GRAMD1CQ8IYS0 662 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms