RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 LATS1O95835 1130 aa13.73□□□□□ -0.21
LIMS1-205ENST00000410093 MT-CYBP00156 380 aaPredicted RBP13.73□□□□□ -0.21
LIMS1-205ENST00000410093 KRT16P08779 473 aa13.73□□□□□ -0.21
LIMS1-205ENST00000410093 ESRRAP11474 423 aaPredicted RBP13.73□□□□□ -0.21
LIMS1-205ENST00000410093 TPH1P17752 444 aa13.73□□□□□ -0.21
LIMS1-205ENST00000410093 HLA-DPA1P20036 260 aa13.73□□□□□ -0.21
LIMS1-205ENST00000410093 TACR2P21452 398 aa13.73□□□□□ -0.21
LIMS1-205ENST00000410093 ETFBP38117 255 aa13.73□□□□□ -0.21
LIMS1-205ENST00000410093 SLC26A3P40879 764 aa13.73□□□□□ -0.21
LIMS1-205ENST00000410093 CD151P48509 253 aa13.73□□□□□ -0.21
LIMS1-205ENST00000410093 OLIG2Q13516 323 aa13.73□□□□□ -0.21
LIMS1-205ENST00000410093 RTP2Q5QGT7 225 aa13.73□□□□□ -0.21
LIMS1-205ENST00000410093 RASIP1Q5U651 963 aa13.73□□□□□ -0.21
LIMS1-205ENST00000410093 METTL21CQ5VZV1 264 aa13.73□□□□□ -0.21
LIMS1-205ENST00000410093 ALG1LQ6GMV1 187 aa13.73□□□□□ -0.21
LIMS1-205ENST00000410093 RNF168Q8IYW5 571 aaPredicted RBP13.73□□□□□ -0.21
LIMS1-205ENST00000410093 SLC7A6OSQ96CW6 309 aaPredicted RBP13.73□□□□□ -0.21
LIMS1-205ENST00000410093 PTCD3Q96EY7 689 aaKnown RBP13.73□□□□□ -0.21
LIMS1-205ENST00000410093 HMCESQ96FZ2 354 aa13.73□□□□□ -0.21
LIMS1-205ENST00000410093 TRMT2BQ96GJ1 504 aaKnown RBP13.73□□□□□ -0.21
LIMS1-205ENST00000410093 MYRFLQ96LU7 910 aa13.73□□□□□ -0.21
LIMS1-205ENST00000410093 FAM161BQ96MY7 647 aa13.73□□□□□ -0.21
LIMS1-205ENST00000410093 ANKRD27Q96NW4 1050 aa13.73□□□□□ -0.21
LIMS1-205ENST00000410093 APOL2Q9BQE5 337 aa13.73□□□□□ -0.21
LIMS1-205ENST00000410093 NDFIP2Q9NV92 336 aa13.73□□□□□ -0.21
LIMS1-205ENST00000410093 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.73□□□□□ -0.21
LIMS1-205ENST00000410093 NUDT5Q9UKK9 219 aa13.73□□□□□ -0.21
LIMS1-205ENST00000410093 ACOT9Q9Y305 439 aa13.73□□□□□ -0.21
LIMS1-205ENST00000410093 PCDHB12Q9Y5F1 795 aa13.73□□□□□ -0.21
LIMS1-205ENST00000410093 LOC285095A0A1B0GVY8 99 aa13.72□□□□□ -0.21
LIMS1-205ENST00000410093 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.72□□□□□ -0.21
LIMS1-205ENST00000410093 ZBBXA8MT70 800 aa13.72□□□□□ -0.21
LIMS1-205ENST00000410093 FCHO1O14526 889 aa13.72□□□□□ -0.21
LIMS1-205ENST00000410093 ACSL4O60488 711 aa13.72□□□□□ -0.21
LIMS1-205ENST00000410093 PRAMEF11O60813 436 aa13.72□□□□□ -0.21
LIMS1-205ENST00000410093 PMPCBO75439 489 aa13.72□□□□□ -0.21
LIMS1-205ENST00000410093 FGF1P05230 155 aa13.72□□□□□ -0.21
LIMS1-205ENST00000410093 EZRP15311 586 aaKnown RBP13.72□□□□□ -0.21
LIMS1-205ENST00000410093 STMN1P16949 149 aa13.72□□□□□ -0.21
LIMS1-205ENST00000410093 OR1E1P30953 314 aa13.72□□□□□ -0.21
LIMS1-205ENST00000410093 CLCN5P51795 746 aa13.72□□□□□ -0.21
LIMS1-205ENST00000410093 AQP5P55064 265 aa13.72□□□□□ -0.21
LIMS1-205ENST00000410093 CDH4P55283 916 aa13.72□□□□□ -0.21
LIMS1-205ENST00000410093 ARPP19P56211 112 aa13.72□□□□□ -0.21
LIMS1-205ENST00000410093 RAB10P61026 200 aa13.72□□□□□ -0.21
LIMS1-205ENST00000410093 DUSP4Q13115 394 aa13.72□□□□□ -0.21
LIMS1-205ENST00000410093 IKBKEQ14164 716 aa13.72□□□□□ -0.21
LIMS1-205ENST00000410093 USP10Q14694 798 aaKnown RBP13.72□□□□□ -0.21
LIMS1-205ENST00000410093 LBRQ14739 615 aaKnown RBP13.72□□□□□ -0.21
LIMS1-205ENST00000410093 POU6F1Q14863 301 aa13.72□□□□□ -0.21
LIMS1-205ENST00000410093 FAM182AQ5T1J6 154 aa13.72□□□□□ -0.21
LIMS1-205ENST00000410093 HECTD3Q5T447 861 aa13.72□□□□□ -0.21
LIMS1-205ENST00000410093 SDHAF4Q5VUM1 108 aa13.72□□□□□ -0.21
LIMS1-205ENST00000410093 RAP1GAP2Q684P5 730 aa13.72□□□□□ -0.21
LIMS1-205ENST00000410093 RAPH1Q70E73 1250 aa13.72□□□□□ -0.21
LIMS1-205ENST00000410093 CHST9Q7L1S5 443 aa13.72□□□□□ -0.21
LIMS1-205ENST00000410093 OTOP2Q7RTS6 562 aa13.72□□□□□ -0.21
LIMS1-205ENST00000410093 PDCD6IPQ8WUM4 868 aaKnown RBP13.72□□□□□ -0.21
LIMS1-205ENST00000410093 CCDC126Q96EE4 140 aa13.72□□□□□ -0.21
LIMS1-205ENST00000410093 SCLYQ96I15 445 aa13.72□□□□□ -0.21
LIMS1-205ENST00000410093 FEM1CQ96JP0 617 aa13.72□□□□□ -0.21
LIMS1-205ENST00000410093 TBC1D10AQ9BXI6 508 aa13.72□□□□□ -0.21
LIMS1-205ENST00000410093 C1orf21Q9H246 121 aa13.72□□□□□ -0.21
LIMS1-205ENST00000410093 SLC27A5Q9Y2P5 690 aa13.72□□□□□ -0.21
LIMS1-205ENST00000410093 ARIH1Q9Y4X5 557 aaPredicted RBP13.72□□□□□ -0.21
LIMS1-205ENST00000410093 CLDN11O75508 207 aa13.71□□□□□ -0.21
LIMS1-205ENST00000410093 VAPBO95292 243 aa13.71□□□□□ -0.21
LIMS1-205ENST00000410093 VNN2O95498 520 aa13.71□□□□□ -0.21
LIMS1-205ENST00000410093 PRKCGP05129 697 aa13.71□□□□□ -0.21
LIMS1-205ENST00000410093 SLC12A2P55011 1212 aa13.71□□□□□ -0.21
LIMS1-205ENST00000410093 TSTD2Q5T7W7 516 aa13.71□□□□□ -0.21
LIMS1-205ENST00000410093 LIPMQ5VYY2 423 aa13.71□□□□□ -0.21
LIMS1-205ENST00000410093 NEPROQ6NW34 567 aa13.71□□□□□ -0.21
LIMS1-205ENST00000410093 C16orf46Q6P387 395 aa13.71□□□□□ -0.21
LIMS1-205ENST00000410093 CNKSR3Q6P9H4 555 aa13.71□□□□□ -0.21
LIMS1-205ENST00000410093 ZYG11AQ6WRX3 759 aa13.71□□□□□ -0.21
LIMS1-205ENST00000410093 ZNF783Q6ZMS7 281 aa13.71□□□□□ -0.21
LIMS1-205ENST00000410093 C16orf59Q7L2K0 433 aa13.71□□□□□ -0.21
LIMS1-205ENST00000410093 DEFB128Q7Z7B8 93 aa13.71□□□□□ -0.21
LIMS1-205ENST00000410093 MIB1Q86YT6 1006 aa13.71□□□□□ -0.21
LIMS1-205ENST00000410093 TMPRSS6Q8IU80 811 aa13.71□□□□□ -0.21
LIMS1-205ENST00000410093 C10orf107Q8IVU9 208 aa13.71□□□□□ -0.21
LIMS1-205ENST00000410093 HERVK_113Q902F9 699 aa13.71□□□□□ -0.21
LIMS1-205ENST00000410093 CWH43Q9H720 699 aa13.71□□□□□ -0.21
LIMS1-205ENST00000410093 NT5MQ9NPB1 228 aa13.71□□□□□ -0.21
LIMS1-205ENST00000410093 OXSMQ9NWU1 459 aa13.71□□□□□ -0.21
LIMS1-205ENST00000410093 SLC17A6Q9P2U8 582 aa13.71□□□□□ -0.21
LIMS1-205ENST00000410093 UXTQ9UBK9 157 aaPredicted RBP13.71□□□□□ -0.21
LIMS1-205ENST00000410093 BAIAP2L1Q9UHR4 511 aa13.71□□□□□ -0.21
LIMS1-205ENST00000410093 SLC39A10Q9ULF5 831 aa13.71□□□□□ -0.21
LIMS1-205ENST00000410093 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.71□□□□□ -0.21
LIMS1-205ENST00000410093 TMEM265A0A087WTH1 108 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 CCDC195A0A1B0GUA6 201 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 MROH6A6NGR9 719 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 CAPN14A8MX76 684 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 G3V2L1 256 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 GYG2O15488 501 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 EFCAB14O75071 495 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 AHSGP02765 367 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 AOC1P19801 751 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms