RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 ERN2Q76MJ5 926 aaKnown RBP22.66■■□□□ 1.22
PTCD3-203ENST00000409783 SRLQ86TD4 932 aa22.66■■□□□ 1.22
PTCD3-203ENST00000409783 CCDC50Q8IVM0 306 aa22.66■■□□□ 1.22
PTCD3-203ENST00000409783 OR14C36Q8NHC7 312 aa22.66■■□□□ 1.22
PTCD3-203ENST00000409783 DNASE2BQ8WZ79 361 aa22.66■■□□□ 1.22
PTCD3-203ENST00000409783 FOXJ1Q92949 421 aa22.66■■□□□ 1.22
PTCD3-203ENST00000409783 LGMNQ99538 433 aa22.66■■□□□ 1.22
PTCD3-203ENST00000409783 OSBPL1AQ9BXW6 950 aa22.66■■□□□ 1.22
PTCD3-203ENST00000409783 TMEM74BQ9NUR3 256 aa22.66■■□□□ 1.22
PTCD3-203ENST00000409783 SAE1Q9UBE0 346 aaPredicted RBP22.66■■□□□ 1.22
PTCD3-203ENST00000409783 PILRBQ9UKJ0 227 aa22.66■■□□□ 1.22
PTCD3-203ENST00000409783 PECAM1P16284 738 aaPredicted RBP22.65■■□□□ 1.22
PTCD3-203ENST00000409783 MPLP40238 635 aa22.65■■□□□ 1.22
PTCD3-203ENST00000409783 RENBPP51606 427 aa22.65■■□□□ 1.22
PTCD3-203ENST00000409783 RAD51Q06609 339 aa22.65■■□□□ 1.22
PTCD3-203ENST00000409783 ZNF805Q5CZA5 627 aa22.65■■□□□ 1.22
PTCD3-203ENST00000409783 MARC1Q5VT66 337 aa22.65■■□□□ 1.22
PTCD3-203ENST00000409783 DCAF12L1Q5VU92 463 aa22.65■■□□□ 1.22
PTCD3-203ENST00000409783 TIGD7Q6NT04 549 aaPredicted RBP22.65■■□□□ 1.22
PTCD3-203ENST00000409783 GDPD4Q6W3E5 623 aa22.65■■□□□ 1.22
PTCD3-203ENST00000409783 BBS12Q6ZW61 710 aa22.65■■□□□ 1.22
PTCD3-203ENST00000409783 PARS2Q7L3T8 475 aaKnown RBP22.65■■□□□ 1.22
PTCD3-203ENST00000409783 CYP2U1Q7Z449 544 aa22.65■■□□□ 1.22
PTCD3-203ENST00000409783 OR2T34Q8NGX1 318 aa22.65■■□□□ 1.22
PTCD3-203ENST00000409783 PPP1R16AQ96I34 528 aa22.65■■□□□ 1.22
PTCD3-203ENST00000409783 KLHL32Q96NJ5 620 aa22.65■■□□□ 1.22
PTCD3-203ENST00000409783 MGME1Q9BQP7 344 aa22.65■■□□□ 1.22
PTCD3-203ENST00000409783 EFR3BQ9Y2G0 817 aa22.65■■□□□ 1.22
PTCD3-203ENST00000409783 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.65■■□□□ 1.22
PTCD3-203ENST00000409783 C16orf96A6NNT2 1141 aa22.64■■□□□ 1.21
PTCD3-203ENST00000409783 LRP3O75074 770 aa22.64■■□□□ 1.21
PTCD3-203ENST00000409783 PIGNO95427 931 aa22.64■■□□□ 1.21
PTCD3-203ENST00000409783 IGHV4-34P06331 123 aa22.64■■□□□ 1.21
PTCD3-203ENST00000409783 PTMAP06454 111 aaKnown RBP22.64■■□□□ 1.21
PTCD3-203ENST00000409783 TGM2P21980 687 aa22.64■■□□□ 1.21
PTCD3-203ENST00000409783 HSPA9P38646 679 aaKnown RBP22.64■■□□□ 1.21
PTCD3-203ENST00000409783 MMP13P45452 471 aa22.64■■□□□ 1.21
PTCD3-203ENST00000409783 NR2C2P49116 596 aa22.64■■□□□ 1.21
PTCD3-203ENST00000409783 SPEM2Q0P670 501 aa22.64■■□□□ 1.21
PTCD3-203ENST00000409783 ZNF235Q14590 738 aa22.64■■□□□ 1.21
PTCD3-203ENST00000409783 CCDC6Q16204 474 aa22.64■■□□□ 1.21
PTCD3-203ENST00000409783 KIAA0895LQ68EN5 471 aa22.64■■□□□ 1.21
PTCD3-203ENST00000409783 CCDC13Q8IYE1 715 aa22.64■■□□□ 1.21
PTCD3-203ENST00000409783 C1orf216Q8TAB5 229 aa22.64■■□□□ 1.21
PTCD3-203ENST00000409783 BIRC7Q96CA5 298 aa22.64■■□□□ 1.21
PTCD3-203ENST00000409783 ORAI3Q9BRQ5 295 aa22.64■■□□□ 1.21
PTCD3-203ENST00000409783 HEMGNQ9BXL5 484 aa22.64■■□□□ 1.21
PTCD3-203ENST00000409783 OSBPL8Q9BZF1 889 aa22.64■■□□□ 1.21
PTCD3-203ENST00000409783 KDM4CQ9H3R0 1056 aa22.64■■□□□ 1.21
PTCD3-203ENST00000409783 ATXN2Q99700 1313 aaKnown RBP22.63■■□□□ 1.21
PTCD3-203ENST00000409783 PTPRZ1P23471 2315 aaPredicted RBP22.63■■□□□ 1.21
PTCD3-203ENST00000409783 PLXNA2O75051 1894 aa22.63■■□□□ 1.21
PTCD3-203ENST00000409783 TTC24A2A3L6 582 aaPredicted RBP22.63■■□□□ 1.21
PTCD3-203ENST00000409783 LRRC72A6NJI9 287 aa22.63■■□□□ 1.21
PTCD3-203ENST00000409783 ADRB3P13945 408 aa22.63■■□□□ 1.21
PTCD3-203ENST00000409783 MAOBP27338 520 aa22.63■■□□□ 1.21
PTCD3-203ENST00000409783 HOXD11P31277 338 aaPredicted RBP22.63■■□□□ 1.21
PTCD3-203ENST00000409783 NEK3P51956 506 aa22.63■■□□□ 1.21
PTCD3-203ENST00000409783 PDK1Q15118 436 aa22.63■■□□□ 1.21
PTCD3-203ENST00000409783 SYT12Q8IV01 421 aa22.63■■□□□ 1.21
PTCD3-203ENST00000409783 REXO1L1PQ8IX06 675 aa22.63■■□□□ 1.21
PTCD3-203ENST00000409783 UBL4BQ8N7F7 174 aa22.63■■□□□ 1.21
PTCD3-203ENST00000409783 CCNYQ8ND76 341 aa22.63■■□□□ 1.21
PTCD3-203ENST00000409783 NSMCE1Q8WV22 266 aa22.63■■□□□ 1.21
PTCD3-203ENST00000409783 PIGKQ92643 395 aa22.63■■□□□ 1.21
PTCD3-203ENST00000409783 NUDCD1Q96RS6 583 aa22.63■■□□□ 1.21
PTCD3-203ENST00000409783 TUBGCP5Q96RT8 1024 aa22.63■■□□□ 1.21
PTCD3-203ENST00000409783 DYRK4Q9NR20 520 aa22.63■■□□□ 1.21
PTCD3-203ENST00000409783 DKK3Q9UBP4 350 aa22.63■■□□□ 1.21
PTCD3-203ENST00000409783 SLCO1B1Q9Y6L6 691 aa22.63■■□□□ 1.21
PTCD3-203ENST00000409783 TSPAN11A1L157 253 aa22.62■■□□□ 1.21
PTCD3-203ENST00000409783 FAM47DPA6NHR8 397 aa22.62■■□□□ 1.21
PTCD3-203ENST00000409783 SPINT1O43278 529 aa22.62■■□□□ 1.21
PTCD3-203ENST00000409783 CCNB1P14635 433 aa22.62■■□□□ 1.21
PTCD3-203ENST00000409783 ABL2P42684 1182 aa22.62■■□□□ 1.21
PTCD3-203ENST00000409783 SCNN1BP51168 640 aa22.62■■□□□ 1.21
PTCD3-203ENST00000409783 CCR5P51681 352 aa22.62■■□□□ 1.21
PTCD3-203ENST00000409783 MAXP61244 160 aa22.62■■□□□ 1.21
PTCD3-203ENST00000409783 AP1S1P61966 158 aa22.62■■□□□ 1.21
PTCD3-203ENST00000409783 PPP2CBP62714 309 aa22.62■■□□□ 1.21
PTCD3-203ENST00000409783 PPP2CAP67775 309 aa22.62■■□□□ 1.21
PTCD3-203ENST00000409783 ZNF211Q13398 564 aaPredicted RBP22.62■■□□□ 1.21
PTCD3-203ENST00000409783 GRM3Q14832 879 aa22.62■■□□□ 1.21
PTCD3-203ENST00000409783 ALG1LQ6GMV1 187 aa22.62■■□□□ 1.21
PTCD3-203ENST00000409783 CAMK1DQ8IU85 385 aa22.62■■□□□ 1.21
PTCD3-203ENST00000409783 UBE2Q2Q8WVN8 375 aa22.62■■□□□ 1.21
PTCD3-203ENST00000409783 IL12RB2Q99665 862 aa22.62■■□□□ 1.21
PTCD3-203ENST00000409783 SMOC1Q9H4F8 434 aa22.62■■□□□ 1.21
PTCD3-203ENST00000409783 SUV39H2Q9H5I1 410 aa22.62■■□□□ 1.21
PTCD3-203ENST00000409783 EBF2Q9HAK2 575 aa22.62■■□□□ 1.21
PTCD3-203ENST00000409783 NT5MQ9NPB1 228 aa22.62■■□□□ 1.21
PTCD3-203ENST00000409783 SEMA4GQ9NTN9 838 aa22.62■■□□□ 1.21
PTCD3-203ENST00000409783 MEI4A8MW99 385 aa22.61■■□□□ 1.21
PTCD3-203ENST00000409783 KCNK1O00180 336 aa22.61■■□□□ 1.21
PTCD3-203ENST00000409783 TRAFD1O14545 582 aaPredicted RBP22.61■■□□□ 1.21
PTCD3-203ENST00000409783 LATO43561 262 aa22.61■■□□□ 1.21
PTCD3-203ENST00000409783 FSBPO95073 299 aa22.61■■□□□ 1.21
PTCD3-203ENST00000409783 ZNF806P0C7X5 589 aa22.61■■□□□ 1.21
PTCD3-203ENST00000409783 HOXD12P35452 270 aa22.61■■□□□ 1.21
PTCD3-203ENST00000409783 IFI35P80217 286 aaPredicted RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms