RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 IL1RAPL2Q9NP60 686 aa4.76□□□□□ -1.65
CLK1-203ENST00000409769 DUOX1Q9NRD9 1551 aa4.76□□□□□ -1.65
CLK1-203ENST00000409769 LIN7CQ9NUP9 197 aaKnown RBP4.76□□□□□ -1.65
CLK1-203ENST00000409769 TMEM184CQ9NVA4 438 aa4.76□□□□□ -1.65
CLK1-203ENST00000409769 TMLHEQ9NVH6 421 aa4.76□□□□□ -1.65
CLK1-203ENST00000409769 ZNF112Q9UJU3 913 aa4.76□□□□□ -1.65
CLK1-203ENST00000409769 DAPP1Q9UN19 280 aa4.76□□□□□ -1.65
CLK1-203ENST00000409769 DOCK2Q92608 1830 aa4.76□□□□□ -1.65
CLK1-203ENST00000409769 ARFGEF1Q9Y6D6 1849 aa4.76□□□□□ -1.65
CLK1-203ENST00000409769 MROH5Q6ZUA9 1318 aa4.75□□□□□ -1.65
CLK1-203ENST00000409769 FER1L6Q2WGJ9 1857 aa4.75□□□□□ -1.65
CLK1-203ENST00000409769 ZNF646O15015 1829 aaPredicted RBP4.75□□□□□ -1.65
CLK1-203ENST00000409769 CNTN5O94779 1100 aa4.75□□□□□ -1.65
CLK1-203ENST00000409769 VEGFAP15692 232 aaPredicted RBP4.75□□□□□ -1.65
CLK1-203ENST00000409769 MX1P20591 662 aa4.75□□□□□ -1.65
CLK1-203ENST00000409769 TGM2P21980 687 aa4.75□□□□□ -1.65
CLK1-203ENST00000409769 GRK5P34947 590 aa4.75□□□□□ -1.65
CLK1-203ENST00000409769 HTR6P50406 440 aa4.75□□□□□ -1.65
CLK1-203ENST00000409769 SLC37A1P57057 533 aa4.75□□□□□ -1.65
CLK1-203ENST00000409769 FAM3BP58499 235 aaPredicted RBP4.75□□□□□ -1.65
CLK1-203ENST00000409769 CHRNDQ07001 517 aa4.75□□□□□ -1.65
CLK1-203ENST00000409769 TUBB8Q3ZCM7 444 aa4.75□□□□□ -1.65
CLK1-203ENST00000409769 BMP2KLQ5H9B9 411 aa4.75□□□□□ -1.65
CLK1-203ENST00000409769 ANKRD40Q6AI12 368 aa4.75□□□□□ -1.65
CLK1-203ENST00000409769 KLHL17Q6TDP4 642 aa4.75□□□□□ -1.65
CLK1-203ENST00000409769 LDHAL6AQ6ZMR3 332 aa4.75□□□□□ -1.65
CLK1-203ENST00000409769 COLCA1Q6ZS62 124 aa4.75□□□□□ -1.65
CLK1-203ENST00000409769 FAM57BQ71RH2 274 aa4.75□□□□□ -1.65
CLK1-203ENST00000409769 AACSQ86V21 672 aa4.75□□□□□ -1.65
CLK1-203ENST00000409769 RHPN2Q8IUC4 686 aa4.75□□□□□ -1.65
CLK1-203ENST00000409769 ANKRD18AQ8IVF6 992 aa4.75□□□□□ -1.65
CLK1-203ENST00000409769 ADGRF3Q8IZF5 1079 aa4.75□□□□□ -1.65
CLK1-203ENST00000409769 PAQR4Q8N4S7 273 aaPredicted RBP4.75□□□□□ -1.65
CLK1-203ENST00000409769 FAM47BQ8NA70 645 aa4.75□□□□□ -1.65
CLK1-203ENST00000409769 KAT2BQ92831 832 aa4.75□□□□□ -1.65
CLK1-203ENST00000409769 SDCCAG3Q96C92 435 aa4.75□□□□□ -1.65
CLK1-203ENST00000409769 RBM17Q96I25 401 aaKnown RBP4.75□□□□□ -1.65
CLK1-203ENST00000409769 THOC3Q96J01 351 aaKnown RBP4.75□□□□□ -1.65
CLK1-203ENST00000409769 GPR78Q96P69 363 aa4.75□□□□□ -1.65
CLK1-203ENST00000409769 MECRQ9BV79 373 aa4.75□□□□□ -1.65
CLK1-203ENST00000409769 TMEM120AQ9BXJ8 343 aa4.75□□□□□ -1.65
CLK1-203ENST00000409769 VPS33BQ9H267 617 aa4.75□□□□□ -1.65
CLK1-203ENST00000409769 PRDM16Q9HAZ2 1276 aa4.75□□□□□ -1.65
CLK1-203ENST00000409769 LRFN1Q9P244 771 aa4.75□□□□□ -1.65
CLK1-203ENST00000409769 DBNLQ9UJU6 430 aaKnown RBP4.75□□□□□ -1.65
CLK1-203ENST00000409769 TTC41PQ6P2S7 1318 aa4.74□□□□□ -1.65
CLK1-203ENST00000409769 PSME4Q14997 1843 aa4.74□□□□□ -1.65
CLK1-203ENST00000409769 A0A1B0GUL7 405 aa4.74□□□□□ -1.65
CLK1-203ENST00000409769 hCG_1642624A0A1W2PR95 340 aa4.74□□□□□ -1.65
CLK1-203ENST00000409769 SLC22A23A1A5C7 686 aa4.74□□□□□ -1.65
CLK1-203ENST00000409769 EME2A4GXA9 379 aaPredicted RBP4.74□□□□□ -1.65
CLK1-203ENST00000409769 NPHP1O15259 732 aa4.74□□□□□ -1.65
CLK1-203ENST00000409769 SMAD6O43541 496 aaKnown RBP4.74□□□□□ -1.65
CLK1-203ENST00000409769 TLX3O43711 291 aaPredicted RBP4.74□□□□□ -1.65
CLK1-203ENST00000409769 BBOX1O75936 387 aa4.74□□□□□ -1.65
CLK1-203ENST00000409769 CST5P28325 142 aaPredicted RBP4.74□□□□□ -1.65
CLK1-203ENST00000409769 MCM2P49736 904 aa4.74□□□□□ -1.65
CLK1-203ENST00000409769 NANOS2P60321 138 aaKnown RBP4.74□□□□□ -1.65
CLK1-203ENST00000409769 B4GALNT1Q00973 533 aa4.74□□□□□ -1.65
CLK1-203ENST00000409769 MTA1Q13330 715 aa4.74□□□□□ -1.65
CLK1-203ENST00000409769 BTBD16Q32M84 506 aa4.74□□□□□ -1.65
CLK1-203ENST00000409769 ANXA2RQ3ZCQ2 193 aa4.74□□□□□ -1.65
CLK1-203ENST00000409769 C10orf62Q5T681 223 aaPredicted RBP4.74□□□□□ -1.65
CLK1-203ENST00000409769 CCDC117Q8IWD4 279 aaPredicted RBP4.74□□□□□ -1.65
CLK1-203ENST00000409769 VPS37AQ8NEZ2 397 aa4.74□□□□□ -1.65
CLK1-203ENST00000409769 SCAMP5Q8TAC9 235 aa4.74□□□□□ -1.65
CLK1-203ENST00000409769 TRAPPC12Q8WVT3 735 aa4.74□□□□□ -1.65
CLK1-203ENST00000409769 HMGB4Q8WW32 186 aa4.74□□□□□ -1.65
CLK1-203ENST00000409769 CPT1BQ92523 772 aa4.74□□□□□ -1.65
CLK1-203ENST00000409769 ATP2A3Q93084 1043 aa4.74□□□□□ -1.65
CLK1-203ENST00000409769 MASTLQ96GX5 879 aa4.74□□□□□ -1.65
CLK1-203ENST00000409769 MPHOSPH8Q99549 860 aa4.74□□□□□ -1.65
CLK1-203ENST00000409769 HTATIP2Q9BUP3 242 aa4.74□□□□□ -1.65
CLK1-203ENST00000409769 ABHD16BQ9H3Z7 469 aa4.74□□□□□ -1.65
CLK1-203ENST00000409769 TXNRD2Q9NNW7 524 aa4.74□□□□□ -1.65
CLK1-203ENST00000409769 PAPOLBQ9NRJ5 636 aaKnown RBP4.74□□□□□ -1.65
CLK1-203ENST00000409769 NDUFAF4Q9P032 175 aa4.74□□□□□ -1.65
CLK1-203ENST00000409769 SLC12A4Q9UP95 1085 aa4.74□□□□□ -1.65
CLK1-203ENST00000409769 PEX14O75381 377 aa4.73□□□□□ -1.65
CLK1-203ENST00000409769 FAM155BO75949 473 aa4.73□□□□□ -1.65
CLK1-203ENST00000409769 T-ENOLP0DO92 83 aa4.73□□□□□ -1.65
CLK1-203ENST00000409769 ST6GAL1P15907 406 aa4.73□□□□□ -1.65
CLK1-203ENST00000409769 CHRNA5P30532 468 aa4.73□□□□□ -1.65
CLK1-203ENST00000409769 ADORA1P30542 326 aa4.73□□□□□ -1.65
CLK1-203ENST00000409769 ALDH1B1P30837 517 aa4.73□□□□□ -1.65
CLK1-203ENST00000409769 GRK6P43250 576 aa4.73□□□□□ -1.65
CLK1-203ENST00000409769 TIMM10P62072 90 aa4.73□□□□□ -1.65
CLK1-203ENST00000409769 C15orf52Q6ZUT6 534 aaKnown RBP4.73□□□□□ -1.65
CLK1-203ENST00000409769 C2CD5Q86YS7 1000 aa4.73□□□□□ -1.65
CLK1-203ENST00000409769 ADHFE1Q8IWW8 467 aa4.73□□□□□ -1.65
CLK1-203ENST00000409769 MMP21Q8N119 569 aa4.73□□□□□ -1.65
CLK1-203ENST00000409769 ZNF548Q8NEK5 533 aaPredicted RBP4.73□□□□□ -1.65
CLK1-203ENST00000409769 CLMNQ96JQ2 1002 aa4.73□□□□□ -1.65
CLK1-203ENST00000409769 ARPC5LQ9BPX5 153 aa4.73□□□□□ -1.65
CLK1-203ENST00000409769 TUBB6Q9BUF5 446 aa4.73□□□□□ -1.65
CLK1-203ENST00000409769 ABHD14AQ9BUJ0 271 aa4.73□□□□□ -1.65
CLK1-203ENST00000409769 ANKRD2Q9GZV1 360 aa4.73□□□□□ -1.65
CLK1-203ENST00000409769 TWSG1Q9GZX9 223 aa4.73□□□□□ -1.65
CLK1-203ENST00000409769 HIPK2Q9H2X6 1198 aa4.73□□□□□ -1.65
CLK1-203ENST00000409769 MOV10Q9HCE1 1003 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms