RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 TCEAL8Q8IYN2 117 aa20.92■□□□□ 0.94
USP39-203ENST00000409470 OR52K2Q8NGK3 314 aa20.92■□□□□ 0.94
USP39-203ENST00000409470 TADA1Q96BN2 335 aa20.92■□□□□ 0.94
USP39-203ENST00000409470 TRPC7Q9HCX4 862 aa20.92■□□□□ 0.94
USP39-203ENST00000409470 TXLNGQ9NUQ3 528 aa20.92■□□□□ 0.94
USP39-203ENST00000409470 THAP1Q9NVV9 213 aa20.92■□□□□ 0.94
USP39-203ENST00000409470 COPG2Q9UBF2 871 aa20.92■□□□□ 0.94
USP39-203ENST00000409470 HEY2Q9UBP5 337 aa20.92■□□□□ 0.94
USP39-203ENST00000409470 CFAP73A6NFT4 308 aa20.92■□□□□ 0.94
USP39-203ENST00000409470 H3BNC9 293 aa20.92■□□□□ 0.94
USP39-203ENST00000409470 MUSKO15146 869 aa20.92■□□□□ 0.94
USP39-203ENST00000409470 GJB3O75712 270 aa20.92■□□□□ 0.94
USP39-203ENST00000409470 RHOCP08134 193 aa20.92■□□□□ 0.94
USP39-203ENST00000409470 MBL2P11226 248 aaPredicted RBP20.92■□□□□ 0.94
USP39-203ENST00000409470 HOXD9P28356 352 aaPredicted RBP20.92■□□□□ 0.94
USP39-203ENST00000409470 GABRB3P28472 473 aa20.92■□□□□ 0.94
USP39-203ENST00000409470 SLC1A2P43004 574 aa20.92■□□□□ 0.94
USP39-203ENST00000409470 SGSHP51688 502 aa20.92■□□□□ 0.94
USP39-203ENST00000409470 TSTD2Q5T7W7 516 aa20.92■□□□□ 0.94
USP39-203ENST00000409470 ZNF470Q6ECI4 717 aa20.92■□□□□ 0.94
USP39-203ENST00000409470 C10orf107Q8IVU9 208 aa20.92■□□□□ 0.94
USP39-203ENST00000409470 ARID3BQ8IVW6 561 aaPredicted RBP20.92■□□□□ 0.94
USP39-203ENST00000409470 TMEM199Q8N511 208 aa20.92■□□□□ 0.94
USP39-203ENST00000409470 KLHL29Q96CT2 875 aa20.92■□□□□ 0.94
USP39-203ENST00000409470 DDX50Q9BQ39 737 aaKnown RBP20.92■□□□□ 0.94
USP39-203ENST00000409470 KITP10721 976 aa20.91■□□□□ 0.94
USP39-203ENST00000409470 MYL2P10916 166 aa20.91■□□□□ 0.94
USP39-203ENST00000409470 FGF3P11487 239 aaPredicted RBP20.91■□□□□ 0.94
USP39-203ENST00000409470 CPA3P15088 417 aa20.91■□□□□ 0.94
USP39-203ENST00000409470 PPM1AP35813 382 aa20.91■□□□□ 0.94
USP39-203ENST00000409470 SKIV2L2P42285 1042 aaKnown RBP20.91■□□□□ 0.94
USP39-203ENST00000409470 ZBTB16Q05516 673 aa20.91■□□□□ 0.94
USP39-203ENST00000409470 TAF1BQ53T94 588 aaPredicted RBP20.91■□□□□ 0.94
USP39-203ENST00000409470 NEPROQ6NW34 567 aa20.91■□□□□ 0.94
USP39-203ENST00000409470 CLEC14AQ86T13 490 aa20.91■□□□□ 0.94
USP39-203ENST00000409470 TBC1D1Q86TI0 1168 aaPredicted RBP20.91■□□□□ 0.94
USP39-203ENST00000409470 WBP2Q969T9 261 aa20.91■□□□□ 0.94
USP39-203ENST00000409470 TSNARE1Q96NA8 513 aa20.91■□□□□ 0.94
USP39-203ENST00000409470 UBA2Q9UBT2 640 aaPredicted RBP20.91■□□□□ 0.94
USP39-203ENST00000409470 SEPT3Q9UH03 358 aa20.91■□□□□ 0.94
USP39-203ENST00000409470 A0A1B0GVM2 712 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 LOC285095A0A1B0GVY8 99 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 TCAF2A6NFQ2 919 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 TEX28O15482 410 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 KDELR3O43731 214 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 SIN3BO75182 1162 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 UNC5CO95185 931 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 SPATA31D3P0C874 917 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 SPATA31D4Q6ZUB0 917 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 CHST9Q7L1S5 443 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 C16orf59Q7L2K0 433 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 OTOP2Q7RTS6 562 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 PACS2Q86VP3 889 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 SLC41A1Q8IVJ1 513 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 HERC6Q8IVU3 1022 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 TNS4Q8IZW8 715 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 C2CD4AQ8NCU7 369 aaPredicted RBP20.9■□□□□ 0.94
USP39-203ENST00000409470 GABPB2Q8TAK5 448 aaPredicted RBP20.9■□□□□ 0.94
USP39-203ENST00000409470 CINPQ9BW66 212 aaPredicted RBP20.9■□□□□ 0.94
USP39-203ENST00000409470 C20orf27Q9GZN8 174 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.9■□□□□ 0.94
USP39-203ENST00000409470 MARCOQ9UEW3 520 aaPredicted RBP20.9■□□□□ 0.94
USP39-203ENST00000409470 ANKRD6Q9Y2G4 727 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 PCDHB12Q9Y5F1 795 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 ACTL7AQ9Y615 435 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 ILVBLA1L0T0 632 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 PHGDHO43175 533 aaKnown RBP20.9■□□□□ 0.94
USP39-203ENST00000409470 ATP5HO75947 161 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 SERPINE1P05121 402 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 ATXN1LP0C7T5 689 aaKnown RBP20.9■□□□□ 0.94
USP39-203ENST00000409470 AVPR1AP37288 418 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 CD151P48509 253 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 CDK18Q07002 472 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 FBXO46Q6PJ61 603 aaPredicted RBP20.9■□□□□ 0.94
USP39-203ENST00000409470 ITIH5Q86UX2 942 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 CALML6Q8TD86 181 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 CYP2S1Q96SQ9 504 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 NMRAL1Q9HBL8 299 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 FBXO5Q9UKT4 447 aa20.9■□□□□ 0.94
USP39-203ENST00000409470 FAM95CA0A1B0GW59 222 aa20.89■□□□□ 0.93
USP39-203ENST00000409470 C2orf71A6NGG8 1288 aa20.89■□□□□ 0.93
USP39-203ENST00000409470 KIAA0355O15063 1070 aa20.89■□□□□ 0.93
USP39-203ENST00000409470 RASSF9O75901 435 aa20.89■□□□□ 0.93
USP39-203ENST00000409470 PAPSS2O95340 614 aaPredicted RBP20.89■□□□□ 0.93
USP39-203ENST00000409470 SERPINF2P08697 491 aa20.89■□□□□ 0.93
USP39-203ENST00000409470 GLDCP23378 1020 aa20.89■□□□□ 0.93
USP39-203ENST00000409470 SLC1A6P48664 564 aa20.89■□□□□ 0.93
USP39-203ENST00000409470 SMAD3P84022 425 aaKnown RBP20.89■□□□□ 0.93
USP39-203ENST00000409470 MSLNQ13421 630 aaPredicted RBP20.89■□□□□ 0.93
USP39-203ENST00000409470 TMEM150AQ86TG1 271 aa20.89■□□□□ 0.93
USP39-203ENST00000409470 FEM1CQ96JP0 617 aa20.89■□□□□ 0.93
USP39-203ENST00000409470 ZNF334Q9HCZ1 680 aaPredicted RBP20.89■□□□□ 0.93
USP39-203ENST00000409470 KCNK4Q9NYG8 393 aa20.89■□□□□ 0.93
USP39-203ENST00000409470 RALBP11234 206 aa20.88■□□□□ 0.93
USP39-203ENST00000409470 HLA-DPA1P20036 260 aa20.88■□□□□ 0.93
USP39-203ENST00000409470 GRK2P25098 689 aa20.88■□□□□ 0.93
USP39-203ENST00000409470 TARSP26639 723 aaKnown RBP20.88■□□□□ 0.93
USP39-203ENST00000409470 SERPINB3P29508 390 aa20.88■□□□□ 0.93
USP39-203ENST00000409470 POLD2P49005 469 aa20.88■□□□□ 0.93
USP39-203ENST00000409470 CLNKQ7Z7G1 428 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms